Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30745
         (612 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g10965.1 68415.m01171 hypothetical protein                          31   0.60 
At4g24680.1 68417.m03533 expressed protein                             30   1.1  
At4g26790.2 68417.m03859 GDSL-motif lipase/hydrolase family prot...    28   4.2  
At4g26790.1 68417.m03858 GDSL-motif lipase/hydrolase family prot...    28   4.2  
At1g77890.1 68414.m09078 expressed protein                             27   7.4  
At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR...    27   9.8  

>At2g10965.1 68415.m01171 hypothetical protein
          Length = 249

 Score = 31.1 bits (67), Expect = 0.60
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 231 ARELKSHIRKPSRPTALNAPKRKRGGNRKDDWSP 332
           A+E +  +R+P  P  L   +R+R G+   DWSP
Sbjct: 170 AKERRRSLREPKGPADLVTMRRRRQGSGWKDWSP 203


>At4g24680.1 68417.m03533 expressed protein
          Length = 1480

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 249  HIRKPSRPTALNAPKRKRGGNRKDDWSPHQPRSR 350
            H+R+  R + +N P  K  GN    W+P  P+ +
Sbjct: 1008 HVRRTQRNSLVNKPAEKFSGNNAVIWAPVHPQQK 1041


>At4g26790.2 68417.m03859 GDSL-motif lipase/hydrolase family protein
           similar to family II lipase EXL3 (GI:15054386), EXL1
           (GI:15054382), EXL2 (GI:15054384) [Arabidopsis
           thaliana]; contains Pfam profile PF00657:
           Lipase/Acylhydrolase with GDSL-like motif
          Length = 351

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +1

Query: 394 FTKKYETELKRVTA*IPLKKANSSISCNEIYVFS*F--NFHSTHIFFSKCLRKYVIGYYK 567
           + K+Y+T L+     +  +KAN  IS   +Y+ S    +F   +    + LRKY +  Y+
Sbjct: 135 YYKEYQTRLRSY---LGEEKANEIIS-ESLYLISIGTNDFLENYYLLPRKLRKYSVNEYQ 190

Query: 568 YFAKGL 585
           YF  G+
Sbjct: 191 YFLIGI 196


>At4g26790.1 68417.m03858 GDSL-motif lipase/hydrolase family protein
           similar to family II lipase EXL3 (GI:15054386), EXL1
           (GI:15054382), EXL2 (GI:15054384) [Arabidopsis
           thaliana]; contains Pfam profile PF00657:
           Lipase/Acylhydrolase with GDSL-like motif
          Length = 351

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +1

Query: 394 FTKKYETELKRVTA*IPLKKANSSISCNEIYVFS*F--NFHSTHIFFSKCLRKYVIGYYK 567
           + K+Y+T L+     +  +KAN  IS   +Y+ S    +F   +    + LRKY +  Y+
Sbjct: 135 YYKEYQTRLRSY---LGEEKANEIIS-ESLYLISIGTNDFLENYYLLPRKLRKYSVNEYQ 190

Query: 568 YFAKGL 585
           YF  G+
Sbjct: 191 YFLIGI 196


>At1g77890.1 68414.m09078 expressed protein
          Length = 460

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 127 DKYHTLDLDQLISNRRAPHSLRTLHPRKGPMYRRRQGNLNLT 252
           + YH LDLD +  +  +PHS+ T    +  +   +Q   +LT
Sbjct: 292 EDYHDLDLDVVSLSSASPHSVETFRNLQQGIAHLKQSVAHLT 333


>At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1008

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = +3

Query: 201 SSKRANVPQKA-RELKSHIRKPSR--PTALNAPKRKRGGNRKDDWSPHQPRSRILGGAEG 371
           S+ R N P     EL S + K S   P ALN       G  K+DW    PR R   G +G
Sbjct: 361 SAFRQNSPPPGFTELASEVSKRSGNLPLALNVLGSHLRGRDKEDWIDMLPRLR--KGLDG 418

Query: 372 QI 377
           +I
Sbjct: 419 KI 420


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,868,102
Number of Sequences: 28952
Number of extensions: 295065
Number of successful extensions: 663
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)