Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30741
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    58   5e-09
AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p...    29   3.5  
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    29   3.5  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    29   3.5  
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.      29   3.5  
Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U97549-7|AAB52848.3|  565|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
 Frame = +2

Query: 254 LNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQ--VEVFKTNMNKVMKDILG-- 421
           LNH+LVE   + D   +  Y+K +MK ++  +E+   D+  V+ FK  +   +  +L   
Sbjct: 72  LNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKD 131

Query: 422 RFKELQFFTGESM---DCDGMVAMMEYRDFDG 508
           RFK L FF GE       +G VA++EYRD DG
Sbjct: 132 RFKNLAFFIGERAAEGAENGQVAIIEYRDVDG 163



 Score = 44.0 bits (99), Expect = 9e-05
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +1

Query: 49  MKIYKDIITGDEMFSDTYKMKLVDEVIYE 135
           M IYKDI T DE+ SD++ MKLVD+++YE
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLVDDLVYE 29



 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
 Frame = +3

Query: 141 GRLVTRAQGDIQIEGFNPSAEEA--DEGTDSAVESGVDIV 254
           G+ V R +G+I + G NPSAEE   D+G+D  VE G+DIV
Sbjct: 32  GKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGIDIV 71


>AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical
           protein F52F10.2 protein.
          Length = 508

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 400 FVHVCFKYFNLVRRLLFQFCY*FFHI 323
           F+++C +Y    RR L  FCY  F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162


>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 293 KKSYTLYLKDYMKKLVAKLEEK 358
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 293 KKSYTLYLKDYMKKLVAKLEEK 358
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 275   TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 439
             T+ FG  D++ Y++ +KD  KKL  +  E+      +  TN  K    + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 275   TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 439
             T+ FG  D++ Y++ +KD  KKL  +  E+      +  TN  K    + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159


>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 293 KKSYTLYLKDYMKKLVAKLEEK 358
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical
           protein ZK945.3 protein.
          Length = 766

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 290 DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKE 433
           +KK+  L L    +K + K+EEKA       K+ ++K +KD L R K+
Sbjct: 22  EKKAKGLKLNKVDRKRIVKIEEKA-----ALKSKVDKAVKDELERLKK 64


>U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical
           protein F09F9.5 protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 352 FQFCY*FFHIVFEVQCVGFLVTEGVCF 272
           +Q C+ F H+      +GF    GVCF
Sbjct: 53  YQTCFGFMHVKIATCSIGFFALLGVCF 79


>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical protein
            F37A4.4 protein.
          Length = 1163

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -1

Query: 183  PRSGYHPVLSSPTYRSFVNNFIDQFHFVSVREHLITSDNVLIDLHFDGL 37
            P S +H  +   T  +  N F  +F  ++  E +IT+ +V++    DG+
Sbjct: 936  PVSSFHIYIEDRTDDNVTNEFTTKFQSITSDEAMITTTHVVVKTTEDGI 984


>U97549-7|AAB52848.3|  565|Caenorhabditis elegans Hypothetical
           protein F15A8.6 protein.
          Length = 565

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 533 KNIMIGICDHQSLYIPSWQP 474
           KNIM+G C+H+ L   S  P
Sbjct: 340 KNIMVGTCEHEGLLFASLGP 359


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,501,855
Number of Sequences: 27780
Number of extensions: 267297
Number of successful extensions: 765
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)