Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30735X
(550 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 1e-24
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 1e-24
SB_56| Best HMM Match : Actin (HMM E-Value=0) 109 1e-24
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 109 1e-24
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 1e-24
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 7e-15
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 77 1e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 70 1e-12
SB_54| Best HMM Match : Actin (HMM E-Value=0) 65 4e-11
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 37 0.012
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 34 0.088
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 31 0.82
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 31 0.82
SB_17957| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_43869| Best HMM Match : ig (HMM E-Value=2.7e-06) 29 3.3
SB_31539| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_17885| Best HMM Match : V-set (HMM E-Value=0.051) 29 3.3
SB_10280| Best HMM Match : F-box (HMM E-Value=5.2e-09) 28 4.4
SB_44456| Best HMM Match : PQQ (HMM E-Value=0.73) 28 5.8
SB_58283| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_35554| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_22527| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 109 bits (263), Expect = 1e-24
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAV 140
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 109 bits (263), Expect = 1e-24
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 116
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 117 EKMTQIMFETFNSPAMYVAIQAV 139
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 55
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 109 bits (263), Expect = 1e-24
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 116
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 117 EKMTQIMFETFNSPAMYVAIQAV 139
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 55
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 109 bits (263), Expect = 1e-24
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAV 140
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 109 bits (263), Expect = 1e-24
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAV 140
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+VI N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 77.4 bits (182), Expect = 7e-15
Identities = 30/83 (36%), Positives = 54/83 (65%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A + R +L + YPM++GIV +W++M+ +W+Y + + +++ VL TE PLNP + R
Sbjct: 61 ASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNR 120
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK E+ FE + +++++QAV
Sbjct: 121 EKMIEVMFENYQFEGVYIAIQAV 143
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 103 NQPIVIHNASTIINTSFADDQIPKCRFPNYIGRP-KHTRVMAGALEV-EIFVG 255
N IV N + + +A P FP+ +GRP + G +EV ++ VG
Sbjct: 6 NSVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVG 58
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +3
Query: 390 EHPVLFTEAPLNPRRXREKSAELFFETFNVPALFLSMQAV 509
+HPVL TEAPLNPRR REK+AE+FFETFNVPALF+SMQAV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAV 165
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +3
Query: 297 PMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAELFFETFN 476
P++ G++ DW+ EKI +YIYSK+ + + S HP+L +EA N R REK EL FE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKN-IKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYN 61
Query: 477 VPALFLSMQAV 509
VPA FL +V
Sbjct: 62 VPAFFLCKNSV 72
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 64.9 bits (151), Expect = 4e-11
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = +3
Query: 339 KIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAELFFETFNVPALFLSMQAV 509
K+W + + DQL E+ PVL TEAPLNP+ RE+ +L FE+FNVP +++++QAV
Sbjct: 2130 KMWEHAF--DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAV 2184
Score = 31.9 bits (69), Expect = 0.36
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKH 210
+VI N S + D+ P+ FP +GRP+H
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRH 2129
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 48.4 bits (110), Expect(2) = 8e-09
Identities = 18/28 (64%), Positives = 26/28 (92%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKI 344
A+ RG+L++KYP+EHGIVT+W++MEKI
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKI 85
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+VI N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 55
Score = 28.7 bits (61), Expect(2) = 8e-09
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = +3
Query: 453 ELFFETFNVPALFLSMQAV 509
++ FETFN PA+++++QAV
Sbjct: 84 KIMFETFNSPAMYVAIQAV 102
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 36.7 bits (81), Expect = 0.012
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 210 HKSYGRSARS-RDLRWPRAEE--HRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLST 380
+KS GRSA+ DL + +E + + K+P+ H IV DW+ ME+ W K L
Sbjct: 269 NKSLGRSAKGVEDLDFFIGDEAIDKPSYATKWPIRHAIVEDWDLMERFWEQCIFK-YLRA 327
Query: 381 FSEEH 395
E+H
Sbjct: 328 EPEDH 332
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 33.9 bits (74), Expect = 0.088
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 109 PIVIHNASTIINTSFADDQIPKCRFPNYIGRPKH 210
P+VI S + FA D PK FP +GRP+H
Sbjct: 1358 PLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRH 1391
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 285 SIKYPMEHGIVTDWNNMEKIWNYIYSKDQLST-FSEEHPVLFTEAPLNPRRXRE 443
+++ P + +VT + E++ ++ +S ++T HPV+ TE NP R+
Sbjct: 130 ALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 30.7 bits (66), Expect = 0.82
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 103 NQPIVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAG 228
N+ IV+ N I FA D++P+ P +G P+ ++ G
Sbjct: 700 NRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 30.7 bits (66), Expect = 0.82
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 297 PMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTE 413
P + G + +W+ ++IW+Y + K+ L +E +LF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKEGLEDAMDE--ILFEE 328
>SB_17957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 892
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 526 CCIQTE-TACIERNNAGTLNVSKNSSADFSLXLRGFRGASVNSTGCSSE 383
C + E A R + +L +S++ + + +R FRGA + +TG SS+
Sbjct: 654 CDLTNECVASFGRKASSSLALSEDHKGEVAYVIRNFRGAVIRNTGNSSD 702
>SB_43869| Best HMM Match : ig (HMM E-Value=2.7e-06)
Length = 399
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 124 NASTIIN-TSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVGLVQKSIAVF--SASN 294
NAST+IN T I + R +YI R KH R+ + + V + QK + ++ +ASN
Sbjct: 255 NASTLINETPNHYKVIKQSRHADYIVRIKHDRLRVLHVYKLMLVNVGQKHVGMYTCNASN 314
Query: 295 T 297
T
Sbjct: 315 T 315
>SB_31539| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 835
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 70 LTKMELSHVIVNQPIVIHNASTIINTSFADDQIP 171
L +L +V+ N P++I S T FA+D++P
Sbjct: 264 LEAFQLCNVLSNAPVLIEQLSWFSPTPFAEDRLP 297
>SB_17885| Best HMM Match : V-set (HMM E-Value=0.051)
Length = 191
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 124 NASTIIN-TSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVGLVQKSIAVF--SASN 294
NAST+IN T I + R +YI R KH R+ + + V + QK + ++ +ASN
Sbjct: 47 NASTLINETPNHYKVIKQSRHADYIVRIKHDRLRVLHVYKLMLVNVGQKHVGMYTCNASN 106
Query: 295 T 297
T
Sbjct: 107 T 107
>SB_10280| Best HMM Match : F-box (HMM E-Value=5.2e-09)
Length = 438
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 105 SAHRNTQRLHHNKHKLR**SDTEMSFPKLYWSSET-HKSYGRSARSRD 245
S R +HH+ + LR + S KLY SSE+ HKS +S D
Sbjct: 35 STQRTQTMVHHSTNDLRSRENLSKSRDKLYRSSESLHKSKESMHKSND 82
>SB_44456| Best HMM Match : PQQ (HMM E-Value=0.73)
Length = 551
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Frame = +3
Query: 219 YGRSARSRDLRWPR--AEEHRGLLSIKYPM--------EHGIVTDWNNMEKIWNYIYSKD 368
YGR R+RD W R E++ G+L M ++ ++ N W + +D
Sbjct: 209 YGRGWRARDHPWSRDYTEQNDGILDSDETMAEEEEEEEDNSLLHSLLNPPTTWAERHGED 268
Query: 369 QLSTFSEEHPVLFTEAPLNPRRXR 440
+ ++ VL+ P NP+ R
Sbjct: 269 E-DEVEDDEGVLYANQPANPQHSR 291
>SB_58283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 27.5 bits (58), Expect = 7.6
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 228 SARSRDLRWPRAEEHRGLLSIKYPMEHGI--VTDWNNMEKIWNYIYSKDQLSTFSEEHPV 401
S + R LR EEH+G++ K + + V ++EK+ S +ST+ P+
Sbjct: 93 SLQDRVLRLAH-EEHQGIVKCKQLLRSTVWWVGIDKDVEKLCKSCESCQLVSTYDRPVPI 151
Query: 402 LFTEAPLNP 428
TE P +P
Sbjct: 152 ATTEMPTSP 160
>SB_35554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 279 LLSIKYPMEHGIVTDWNNMEKIWNYIY-----SKDQLSTFSEEHPVLFTEAPLNPRRXRE 443
+LS + + GI+ +EK WN + + ++S E P + +PR+ E
Sbjct: 255 VLSCAHAISAGIIASCRGLEKAWNTVLAPVSRNPRKVSGTRESCPKSHPRSFRDPRKLPE 314
Query: 444 KSAELF 461
KS E F
Sbjct: 315 KSPEKF 320
>SB_22527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1048
Score = 27.5 bits (58), Expect = 7.6
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 31 Y*KSQLLPNRNKILTKMELSHVIVNQPIVIHNASTIINTSFADDQ-IPKCRFPNYIGRPK 207
Y S +LP+ + +T ++ + VN+ STI + + A ++ + + R Y+G PK
Sbjct: 433 YSLSGILPSEHVTIT---ITPIFVNETYFNGKPSTIRSDAPAPERYVVRVRNLRYLGNPK 489
Query: 208 HTRVMA 225
H V A
Sbjct: 490 HVAVAA 495
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,530,394
Number of Sequences: 59808
Number of extensions: 329359
Number of successful extensions: 801
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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