Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30735X
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 139 1e-33
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 110 6e-25
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 110 6e-25
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 110 6e-25
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 110 6e-25
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 110 6e-25
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 110 6e-25
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 110 6e-25
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 110 6e-25
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 110 6e-25
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 110 6e-25
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 110 7e-25
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 78 4e-15
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 66 2e-11
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 48 3e-06
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 48 3e-06
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 48 3e-06
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 44 5e-05
Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical p... 30 1.3
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 29 2.9
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 29 2.9
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical pr... 28 5.1
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 139 bits (337), Expect = 1e-33
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +3
Query: 255 PRAEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRR 434
P+AE +RGL SI+YPMEHGIV +W++MEKIW YI+ +DQL F EEHPVL T+APLNP +
Sbjct: 59 PKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLK 118
Query: 435 XREKSAELFFETFNVPALFLSMQAV 509
RE+SAE+FFETFNVPAL++ MQAV
Sbjct: 119 NRERSAEIFFETFNVPALYIQMQAV 143
Score = 71.7 bits (168), Expect = 3e-13
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = +1
Query: 94 VIVNQPIVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
VI NQP+VI N S +I FA +Q PK RF N++GRPK+ RVMAG L+ +IF+G
Sbjct: 5 VIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIG 58
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 110 bits (265), Expect = 6e-25
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAV 140
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 110 bits (265), Expect = 6e-25
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAV 140
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 110 bits (265), Expect = 6e-25
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAV 140
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 110 bits (265), Expect = 6e-25
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAV 140
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 110 bits (265), Expect = 6e-25
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAV 140
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 110 bits (265), Expect = 6e-25
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAV 140
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+++ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 110 bits (265), Expect = 6e-25
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAV 140
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 110 bits (265), Expect = 6e-25
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 15 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 73
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 74 EKMTQIMFETFNTPAMYVAIQAV 96
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 110 bits (265), Expect = 6e-25
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 45 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 103
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 104 EKMTQIMFETFNTPAMYVAIQAV 126
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 151 FADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 8 FAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 42
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 110 bits (265), Expect = 6e-25
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 117
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAV 140
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 110 bits (264), Expect = 7e-25
Identities = 46/83 (55%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIVT+W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRIAPEEHPVLLTEAPLNPKSNR 116
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 117 EKMTQIMFETFNTPAMYVNIQAV 139
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 55
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 78.2 bits (184), Expect = 4e-15
Identities = 36/75 (48%), Positives = 49/75 (65%)
Frame = +3
Query: 285 SIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAELFF 464
++KYP+ HGIV DW+ ME+ W K L E+H L TE PLN RE +AE+ F
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFK-YLRAEPEDHFFLLTEPPLNTPENREYTAEIMF 138
Query: 465 ETFNVPALFLSMQAV 509
E+FNVP L++++QAV
Sbjct: 139 ESFNVPGLYIAVQAV 153
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 72.5 bits (170), Expect = 2e-13
Identities = 29/79 (36%), Positives = 52/79 (65%)
Frame = +3
Query: 273 RGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSA 452
R +L I YPM++GIV +W++M +W++ + ++L +E +L TE PLNP REK
Sbjct: 65 RQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMF 124
Query: 453 ELFFETFNVPALFLSMQAV 509
++ FE + ++++++QAV
Sbjct: 125 QVMFEQYGFNSIYVAVQAV 143
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRP-KHTRVMAGALEV-EIFVG 255
IV+ N + + +A P FP+ +GRP + G +E+ ++ VG
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVG 58
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/76 (44%), Positives = 42/76 (55%)
Frame = +3
Query: 300 MEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAELFFETFNV 479
M+ G++ DW EKI + Y S SE HPVLF+E+ N R REK E+ FE F V
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSE-HPVLFSESSWNDRARREKLTEIMFEKFQV 152
Query: 480 PALFLSMQAVSVCMQQ 527
PA +LS V C Q
Sbjct: 153 PAYYLSKNVVLSCFAQ 168
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 48.4 bits (110), Expect = 3e-06
Identities = 18/28 (64%), Positives = 26/28 (92%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKI 344
A+ RG+L++KYP+EHGIVT+W++MEKI
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 48.4 bits (110), Expect = 3e-06
Identities = 18/28 (64%), Positives = 26/28 (92%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKI 344
A+ RG+L++KYP+EHGIVT+W++MEKI
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 48.4 bits (110), Expect = 3e-06
Identities = 18/28 (64%), Positives = 26/28 (92%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKI 344
A+ RG+L++KYP+EHGIVT+W++MEKI
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
+V+ N S + FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 56
Score = 42.7 bits (96), Expect = 2e-04
Identities = 15/25 (60%), Positives = 23/25 (92%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNM 335
A+ RG+L++KYP+EHGIVT+W++M
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDM 83
>Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 29.9 bits (64), Expect = 1.3
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 321 DWNNMEKIWNYIYSKDQLSTFSEE 392
D ++++ W+Y+Y KD + FS+E
Sbjct: 315 DIADVDRFWDYLYEKDDIQKFSDE 338
>Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 29.9 bits (64), Expect = 1.3
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 321 DWNNMEKIWNYIYSKDQLSTFSEE 392
D ++++ W+Y+Y KD + FS+E
Sbjct: 315 DIADVDRFWDYLYEKDDIQKFSDE 338
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +3
Query: 324 WNNMEKIWNYIYSKDQLSTFSEEHP-VLFTEAPLNPRRXREKSAELFFETFNVP 482
W N E WNY S + STF P T P P S +L + +VP
Sbjct: 240 WPNTESQWNYDPSTNGYSTFLASTPDTSTTYQPYQPSEYANFSRQLESSSSSVP 293
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +3
Query: 324 WNNMEKIWNYIYSKDQLSTFSEEHP-VLFTEAPLNPRRXREKSAELFFETFNVP 482
W N E WNY S + STF P T P P S +L + +VP
Sbjct: 240 WPNTESQWNYDPSTNGYSTFLASTPDTSTTYQPYQPSEYANFSRQLESSSSSVP 293
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +3
Query: 324 WNNMEKIWNYIYSKDQLSTFSEEHP-VLFTEAPLNPRRXREKSAELFFETFNVP 482
W N E WNY S + STF P T P P S +L + +VP
Sbjct: 240 WPNTESQWNYDPSTNGYSTFLASTPDTSTTYQPYQPSEYANFSRQLESSSSSVP 293
>Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 348 NYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAELFFETFNVPALFLSMQAV 509
NY+ SK+ L T E+ P+L AP +E + E+ + P + ++Q V
Sbjct: 272 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 323
>Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 348 NYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAELFFETFNVPALFLSMQAV 509
NY+ SK+ L T E+ P+L AP +E + E+ + P + ++Q V
Sbjct: 236 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 287
>Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 348 NYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAELFFETFNVPALFLSMQAV 509
NY+ SK+ L T E+ P+L AP +E + E+ + P + ++Q V
Sbjct: 272 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 323
>Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 348 NYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAELFFETFNVPALFLSMQAV 509
NY+ SK+ L T E+ P+L AP +E + E+ + P + ++Q V
Sbjct: 236 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 287
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,379,141
Number of Sequences: 27780
Number of extensions: 250816
Number of successful extensions: 739
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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