Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30735X
(550 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 110 5e-25
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 109 2e-24
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 108 2e-24
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 108 2e-24
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 108 3e-24
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 108 3e-24
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 107 5e-24
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 107 5e-24
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 107 5e-24
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 102 2e-22
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 101 3e-22
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 101 4e-22
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 73 1e-13
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 72 3e-13
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 70 1e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 55 4e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 53 1e-07
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 52 2e-07
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 36 0.013
At1g16690.2 68414.m01999 transcription factor-related similar to... 33 0.17
At1g16690.1 68414.m01998 transcription factor-related similar to... 33 0.17
At4g24290.2 68417.m03488 expressed protein 30 0.89
At4g26970.1 68417.m03881 aconitate hydratase, cytoplasmic, putat... 29 2.7
At5g20830.1 68418.m02474 sucrose synthase / sucrose-UDP glucosyl... 28 3.6
At5g49190.1 68418.m06088 sucrose synthase / sucrose-UDP glucosyl... 28 4.7
At4g02280.1 68417.m00309 sucrose synthase, putative / sucrose-UD... 28 4.7
At5g17300.1 68418.m02026 myb family transcription factor similar... 27 8.3
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 110 bits (265), Expect = 5e-25
Identities = 46/83 (55%), Positives = 68/83 (81%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIV++W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 118
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFNVPA+++++QAV
Sbjct: 119 EKMTQIMFETFNVPAMYVAIQAV 141
Score = 50.8 bits (116), Expect = 6e-07
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 106 QPIVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
QP+V N + ++ FA D P+ FP+ +GRP+HT VM G + + +VG
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 109 bits (261), Expect = 2e-24
Identities = 45/83 (54%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIV++W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 118
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAV 141
Score = 50.8 bits (116), Expect = 6e-07
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 106 QPIVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
QP+V N + ++ FA D P+ FP+ +GRP+HT VM G + + +VG
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 108 bits (260), Expect = 2e-24
Identities = 45/83 (54%), Positives = 66/83 (79%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIV +W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 118
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAV 141
Score = 50.8 bits (116), Expect = 6e-07
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 106 QPIVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
QP+V N + ++ FA D P+ FP+ +GRP+HT VM G + + +VG
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 108 bits (260), Expect = 2e-24
Identities = 45/83 (54%), Positives = 66/83 (79%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIV +W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANR 118
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAV 141
Score = 50.8 bits (116), Expect = 6e-07
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 106 QPIVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
QP+V N + ++ FA D P+ FP+ +GRP+HT VM G + + +VG
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 108 bits (259), Expect = 3e-24
Identities = 44/83 (53%), Positives = 66/83 (79%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIV +W++MEKIW++ + ++L EEHP+L TEAPLNP+ R
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFY-NELRVAPEEHPILLTEAPLNPKANR 118
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAV 141
Score = 50.8 bits (116), Expect = 6e-07
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 106 QPIVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
QP+V N + ++ FA D P+ FP+ +GRP+HT VM G + + +VG
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 108 bits (259), Expect = 3e-24
Identities = 44/83 (53%), Positives = 66/83 (79%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHGIV +W++MEKIW++ + ++L EEHP+L TEAPLNP+ R
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFY-NELRVAPEEHPILLTEAPLNPKANR 118
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAV 141
Score = 50.8 bits (116), Expect = 6e-07
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 106 QPIVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
QP+V N + ++ FA D P+ FP+ +GRP+HT VM G + + +VG
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 107 bits (257), Expect = 5e-24
Identities = 44/83 (53%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHG+V++W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFY-NELRIAPEEHPVLLTEAPLNPKANR 118
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAV 141
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 106 QPIVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
QPIV N + ++ FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 8 QPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVG 57
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 107 bits (257), Expect = 5e-24
Identities = 44/83 (53%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHG+V++W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFY-NELRIAPEEHPVLLTEAPLNPKANR 118
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAV 141
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 106 QPIVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
QPIV N + ++ FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 8 QPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVG 57
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 107 bits (257), Expect = 5e-24
Identities = 44/83 (53%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+L++KYP+EHG+V++W++MEKIW++ + ++L EEHPVL TEAPLNP+ R
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFY-NELRIAPEEHPVLLTEAPLNPKANR 118
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FETFN PA+++++QAV
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAV 141
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 106 QPIVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
QPIV N + ++ FA D P+ FP+ +GRP+H VM G + + +VG
Sbjct: 8 QPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVG 57
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 102 bits (244), Expect = 2e-22
Identities = 43/82 (52%), Positives = 61/82 (74%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
AE G+L++ YPMEHG+V++W++MEKIW + + + L EEHPVL TEAPLNP+ R
Sbjct: 15 AEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSE-LRVAPEEHPVLLTEAPLNPKADR 73
Query: 441 EKSAELFFETFNVPALFLSMQA 506
EK ++ FETF VP++++ MQA
Sbjct: 74 EKMTQIMFETFAVPSMYIGMQA 95
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 101 bits (242), Expect = 3e-22
Identities = 41/83 (49%), Positives = 65/83 (78%)
Frame = +3
Query: 261 AEEHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXR 440
A+ RG+LS+KYP+EHG+V++W++MEKIW++ + ++L EEHP+L TEAPLNP+ R
Sbjct: 61 AQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFY-NELRLEPEEHPILLTEAPLNPKVNR 119
Query: 441 EKSAELFFETFNVPALFLSMQAV 509
EK ++ FE+F P++++ +QAV
Sbjct: 120 EKMTQIMFESFAFPSMYIGIQAV 142
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 112 IVIHNASTIINTSFADDQIPKCRFPNYIGRPKHTRVMAGALEVEIFVG 255
IV N + ++ FA D P+ FP+ +GRP+H VM G E + FVG
Sbjct: 11 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVG 58
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 101 bits (241), Expect = 4e-22
Identities = 43/80 (53%), Positives = 63/80 (78%)
Frame = +3
Query: 270 HRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKS 449
+R +L++K PMEHGIV +W++MEKIW+Y + ++L EEHPVL TEAP NP+ REK
Sbjct: 52 NRDILTLKDPMEHGIVNNWDDMEKIWHYTFY-NELRVDPEEHPVLLTEAPYNPKANREKM 110
Query: 450 AELFFETFNVPALFLSMQAV 509
++ FE+F+VPA+++SMQ+V
Sbjct: 111 TQIMFESFDVPAMYVSMQSV 130
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 106 QPIVIHNASTIINTSFADDQIPKCRFPNYIGRPK 207
+PIV ++ FA D+ PK FP +GRP+
Sbjct: 2 KPIVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 72.9 bits (171), Expect = 1e-13
Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Frame = +3
Query: 165 DTEMSFPKLYWSSETHKSYGRSARSRDLRWPRAEE---HRGLLSIKYPMEHGIVTDWNNM 335
D ++ K +SE K+ +S+ + ++ R + + P++ GIV+DW+ +
Sbjct: 47 DVDVDSTKTNSNSEDSKTESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLV 106
Query: 336 EKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAELFFETFNVPALFLSMQAV 509
+ IW + + K L EHP+L E PLN ++ REK+AEL FE + VPALF++ V
Sbjct: 107 DNIWEHAF-KSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPV 163
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 71.7 bits (168), Expect = 3e-13
Identities = 32/75 (42%), Positives = 47/75 (62%)
Frame = +3
Query: 285 SIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAELFF 464
++ YP+EHG V DW+ ME+ W + L E+H L TE+PL P RE + E+ F
Sbjct: 85 NLHYPIEHGQVEDWDAMERYWQQCIF-NYLRCDPEDHYFLLTESPLTPPESREYTGEILF 143
Query: 465 ETFNVPALFLSMQAV 509
ETFNVP L++++ +V
Sbjct: 144 ETFNVPGLYIAVNSV 158
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = +3
Query: 267 EHRGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREK 446
E R L I YP+ +GIV +W++ME +W++ + ++L + +L T+ PLNP + REK
Sbjct: 61 ELRHQLDINYPVHNGIVQNWDDMEHVWDHAFY-NELKINPSDCKILLTDPPLNPSKNREK 119
Query: 447 SAELFFETFNVPALFLSMQAV 509
E FE +N +F+ +QAV
Sbjct: 120 MIETMFEKYNFAGVFIQIQAV 140
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 54.8 bits (126), Expect = 4e-08
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +3
Query: 297 PMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAELFFETFN 476
P+E G++ DW+ ME + Y+ E +LFT+ P+ RE+ +L FETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 477 VPALFLSMQAV 509
V + S QAV
Sbjct: 117 VSGFYASEQAV 127
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = +3
Query: 297 PMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAELFFETFN 476
P + +V + ME I +Y + + + +HP+L TE NP + R K AEL FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 477 VPALFLSMQA 506
VPA+ + A
Sbjct: 145 VPAVAFGVDA 154
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 109 PIVIHNASTIINTSFADDQIPKCRFPNYIGRPKH 210
PIVI N ++ +A + P+ F N + RP+H
Sbjct: 21 PIVIDNGASYFRIGWAGETEPRVVFRNIVQRPRH 54
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +3
Query: 273 RGLLSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSA 452
R + I P + GIVTDW+ ++ +W++ + ++ L EHP+L E PLN ++ REKS
Sbjct: 80 RDQMEILSPTKDGIVTDWDMVDNVWDHAF-RNCLMIDPTEHPMLLAEPPLNSQQQREKSG 138
Query: 453 ELFFETF 473
F TF
Sbjct: 139 ---FSTF 142
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 36.3 bits (80), Expect = 0.013
Identities = 17/71 (23%), Positives = 39/71 (54%)
Frame = +3
Query: 285 SIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAELFF 464
+++ P++ G + + + +IW+++++ L +L TEAPL+ + + EL F
Sbjct: 60 AVRRPIDRGYLINSDLQREIWSHLFTS-LLHIAPSSSSLLLTEAPLSIPSVQRTTDELVF 118
Query: 465 ETFNVPALFLS 497
E F +L+++
Sbjct: 119 EDFGFSSLYIA 129
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 32.7 bits (71), Expect = 0.17
Identities = 23/59 (38%), Positives = 27/59 (45%)
Frame = +3
Query: 282 LSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAEL 458
LSIKY + H I + W N +IW K L PV T P N R REK+ L
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIW----QKPILRRLQPPPPVNDTN-PYNVFRPREKAHRL 231
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 32.7 bits (71), Expect = 0.17
Identities = 23/59 (38%), Positives = 27/59 (45%)
Frame = +3
Query: 282 LSIKYPMEHGIVTDWNNMEKIWNYIYSKDQLSTFSEEHPVLFTEAPLNPRRXREKSAEL 458
LSIKY + H I + W N +IW K L PV T P N R REK+ L
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIW----QKPILRRLQPPPPVNDTN-PYNVFRPREKAHRL 231
>At4g24290.2 68417.m03488 expressed protein
Length = 606
Score = 30.3 bits (65), Expect = 0.89
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 402 LFTEAPLNPRRXREKSAELFFETFNVPALFLSMQAVSVCMQQVVPRILY 548
+F+E PL P+R ++ A L F F P L+++ V V + + LY
Sbjct: 343 VFSELPLGPQRKQQSCASLQFSFFG-PKLYVNTTPVDVGKRPITGMRLY 390
>At4g26970.1 68417.m03881 aconitate hydratase, cytoplasmic, putative
/ citrate hydro-lyase/aconitase, putative strong
similarity to SP|P49608 Aconitate hydratase, cytoplasmic
(EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase)
{Cucurbita maxima}; contains Pfam profiles PF00330:
Aconitase family (aconitate hydratase), PF00694:
Aconitase C-terminal domain
Length = 995
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Frame = +3
Query: 213 KSYGRSARSRDLRWPRAEE-----HRGLLSIKYPMEHGIVTD----WNNMEKIWNYIYSK 365
+S G+S RD+ WP EE +L + + +T+ WN + + +YS
Sbjct: 679 RSDGKSVYLRDV-WPSNEEVAQVVQYSVLPSMFKSSYETITEGNPLWNELSAPSSTLYSW 737
Query: 366 DQLSTFSEEHPVLFTEAPLNPRRXRE 443
D ST+ E P F NP RE
Sbjct: 738 DPNSTYIHE-PPYFKNMTANPPGPRE 762
>At5g20830.1 68418.m02474 sucrose synthase / sucrose-UDP
glucosyltransferase (SUS1) identical to SP|P49040
Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP
glucosyltransferase) {Arabidopsis thaliana}
Length = 808
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 267 EHRGLLSIKYPMEHGIVTDWNNMEKIWNYI--YSKDQLSTFSEE 392
E+ +L + + E GIV W + ++W Y+ Y++D S+E
Sbjct: 360 EYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKE 403
>At5g49190.1 68418.m06088 sucrose synthase / sucrose-UDP
glucosyltransferase (SUS2) nearly identical to SP|Q00917
Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP
glucosyltransferase) {Arabidopsis thaliana} (SUS2);
contains Pfam profile: PF00862 sucrose synthase
Length = 807
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 267 EHRGLLSIKYPMEHGIVTDWNNMEKIWNYI--YSKDQLSTFSEE 392
EH +L I + E GI+ W + +W Y+ +++D + S E
Sbjct: 357 EHAHILRIPFRTEKGILRKWISRFDVWPYLETFAEDASNEISAE 400
>At4g02280.1 68417.m00309 sucrose synthase, putative / sucrose-UDP
glucosyltransferase, putative strong similarity to
sucrose synthase GI:6682841 from [Citrus unshiu]
Length = 809
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 267 EHRGLLSIKYPMEHGIVTDWNNMEKIWNYI--YSKDQLS 377
EH +L + + E GI+ W + +W Y+ Y++D S
Sbjct: 360 EHTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAAS 398
>At5g17300.1 68418.m02026 myb family transcription factor similar to
CCA1 [Arabidopsis thaliana] GI:4090569; contains Pfam
profile PF00249: Myb-like DNA-binding domain
Length = 387
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 195 WSSETHKSYGRSARSRDLRWPRAEEHRG 278
W+ E HK + + + W R EEH G
Sbjct: 58 WTDEEHKKFVEALKLYGRAWRRIEEHVG 85
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,429,061
Number of Sequences: 28952
Number of extensions: 222142
Number of successful extensions: 649
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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