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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS31056
         (661 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.022
SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32)                   33   0.27 
SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32)                    33   0.27 
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)                   32   0.36 
SB_53279| Best HMM Match : rve (HMM E-Value=5.2e-36)                   32   0.36 
SB_49675| Best HMM Match : rve (HMM E-Value=5.2e-36)                   32   0.36 
SB_48115| Best HMM Match : rve (HMM E-Value=5.3e-36)                   32   0.36 
SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)                 32   0.36 
SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07)                   32   0.36 
SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36)                   32   0.36 
SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36)                   32   0.36 
SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36)                   32   0.36 
SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.36 
SB_35114| Best HMM Match : RVT_1 (HMM E-Value=2.2e-11)                 32   0.36 
SB_9297| Best HMM Match : RVT_1 (HMM E-Value=7e-21)                    32   0.36 
SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)                    32   0.36 
SB_31326| Best HMM Match : rve (HMM E-Value=6.1e-07)                   32   0.48 
SB_40280| Best HMM Match : C2 (HMM E-Value=1.8e-05)                    31   0.63 
SB_46749| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15)                   29   2.5  
SB_44820| Best HMM Match : 7tm_1 (HMM E-Value=9e-15)                   29   2.5  
SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.5  
SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.4  
SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07)               28   5.9  
SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0)              28   5.9  
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)              28   5.9  
SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.7  

>SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1574

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 19/68 (27%), Positives = 33/68 (48%)
 Frame = +1

Query: 439  HQDLGRLLIDHQIHIRINLNLVIPSITESANPSSHSAAAITAPGGLVRPGGTRPNRSKPQ 618
            H+   R L   Q   +  LN  +PS ++S +P+   +  +  P G      +  N SK  
Sbjct: 964  HRQSSRRLASQQESQQSLLNAPLPSSSKSISPTLSGSGPLGQPDGSAGQSSSSGNTSKGP 1023

Query: 619  KASFGNPI 642
            ++S+GNP+
Sbjct: 1024 RSSWGNPL 1031


>SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32)
          Length = 546

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
           TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 320 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKEVATSRTTAYNPEGN 375


>SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32)
          Length = 517

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
           TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 320 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKEVATSRTTAYNPEGN 375


>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
          Length = 2160

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373  TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
            TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 891  TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 946


>SB_53279| Best HMM Match : rve (HMM E-Value=5.2e-36)
          Length = 337

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
           TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 175 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 230


>SB_49675| Best HMM Match : rve (HMM E-Value=5.2e-36)
          Length = 412

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
           TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 160 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 215


>SB_48115| Best HMM Match : rve (HMM E-Value=5.3e-36)
          Length = 238

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
           TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 76  TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 131


>SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
          Length = 998

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373  TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
            TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 938  TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 993


>SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07)
          Length = 409

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
           TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 349 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 404


>SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36)
          Length = 1022

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
           TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 646 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 701


>SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36)
          Length = 748

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
           TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 493 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 548


>SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36)
          Length = 1048

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373  TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
            TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 920  TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 975


>SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1258

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373  TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
            TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 1039 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 1094


>SB_35114| Best HMM Match : RVT_1 (HMM E-Value=2.2e-11)
          Length = 512

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
           TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 448 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 503


>SB_9297| Best HMM Match : RVT_1 (HMM E-Value=7e-21)
          Length = 1032

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
           TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 554 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 609


>SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)
          Length = 1677

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373  TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
            TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 922  TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 977


>SB_31326| Best HMM Match : rve (HMM E-Value=6.1e-07)
          Length = 330

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
           TP +  CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 270 TPTVIKCLTSVFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 325


>SB_40280| Best HMM Match : C2 (HMM E-Value=1.8e-05)
          Length = 485

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +3

Query: 480 YKDKFKPSYPLHHRIS-QSQFTLRSSHNG-SWRISSTGWDETKPEQTTESKFRKP 638
           Y+D+ KP Y   HR+S Q   T  + H+  SWR   +  D    +  T  +F  P
Sbjct: 215 YQDELKPGYQGEHRLSYQGSETSGTYHDAQSWRSQDSQLDTDSLDTFTSGEFLTP 269


>SB_46749| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 190

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +1

Query: 454 RLLIDHQIHIRINLNLV-IPSITESANPSSHSAAAITAPGGLVRPGGT-RPNRSKPQKAS 627
           R+LI  Q HIR+   LV +PS     +   H   ++ +P G  RPG   R N  K Q  S
Sbjct: 124 RVLI-RQRHIRVRKQLVNVPSFVVRLDSQKHIDFSLNSPYGGGRPGRVKRKNMKKGQGGS 182

Query: 628 FG 633
            G
Sbjct: 183 GG 184


>SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15)
          Length = 615

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +1

Query: 391 CLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
           CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 423 CLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 472


>SB_44820| Best HMM Match : 7tm_1 (HMM E-Value=9e-15)
          Length = 456

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
 Frame = +1

Query: 301 PLPTVTTYLTG*ISCHHHHRLPACT-----PLLSICLTPRTTM-SGRPVRHRHQDLGR 456
           P+  V   L G I CH H  +PA       P L +    R  + +G PV  RH+  GR
Sbjct: 303 PIAGVNRQLYGFILCHLHVTIPALIIGIVYPRLIVIYRKRLVLGNGIPVASRHEQTGR 360


>SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1095

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +1

Query: 391 CLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543
           CLT   TM G P  + H D G  LI  ++   +N   V  S T + NP  +
Sbjct: 849 CLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 898


>SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 929

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = +3

Query: 456 IVNRPPNPYKDKFKPSYPLHHRISQSQFTLRSSHNGSWRISSTGWDETKPEQTTESKFRK 635
           I++RPP    DK    +PL HR +Q +     +H+   R  +  W   +  +  E  +R 
Sbjct: 635 ILSRPPVRVNDKLM--FPLCHRCAQEEEQGSCTHSDEERAFTATWAHPEGYKALEKGYRV 692

Query: 636 PDLY 647
             +Y
Sbjct: 693 IRVY 696


>SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07)
          Length = 754

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 546 RSSHNGSWRISSTGWDETKPEQTTESKFRKPDLYL 650
           R +   S  +SST  D++ P++++   F +PD YL
Sbjct: 360 RMTQPDSRNVSSTSRDKSSPDESSARGFTRPDGYL 394


>SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0)
          Length = 1325

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = +3

Query: 180 QQHAFRRHVHHGTRTMGQPARRVGRSATPQHTRQGRIMALP----PAHGY 317
           +   F  ++HH TRT G+      R  T +  RQ   +A+P    P H Y
Sbjct: 455 EDQLFHAYLHHKTRTTGKHDSYSTRIYTTKRVRQVNTIAIPRVSTPRHVY 504


>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
          Length = 406

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
 Frame = +3

Query: 309 HGYYVSDRIDLMXXXXXXXRLYPTTQH--LPHPSHYNEWQASXXXXXXXXKIVNR---PP 473
           H  Y S  I            YPT +H   PHP++ +    S         ++     PP
Sbjct: 105 HPSYPSSHIQASLLPHIQHPSYPTYKHPPFPHPTYKHPSYPSPHIQASLLPLIPHTSIPP 164

Query: 474 NPYKDKFKPSYPLHH 518
            P+     PSYP ++
Sbjct: 165 TPHPTYKHPSYPTYN 179


>SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1044

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +1

Query: 478 HIRINLNLVIPSITESANPSSHSAAAITAPGG-LVRPGGT 594
           HI  +     P+    AN ++ +     APGG  V PGGT
Sbjct: 679 HIHFSTGSPAPTSAPGANKTTAAGGTTAAPGGTTVAPGGT 718


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,631,804
Number of Sequences: 59808
Number of extensions: 473012
Number of successful extensions: 1407
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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