BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS31056 (661 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022 SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32) 33 0.27 SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32) 33 0.27 SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 32 0.36 SB_53279| Best HMM Match : rve (HMM E-Value=5.2e-36) 32 0.36 SB_49675| Best HMM Match : rve (HMM E-Value=5.2e-36) 32 0.36 SB_48115| Best HMM Match : rve (HMM E-Value=5.3e-36) 32 0.36 SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 32 0.36 SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07) 32 0.36 SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36) 32 0.36 SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36) 32 0.36 SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36) 32 0.36 SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36 SB_35114| Best HMM Match : RVT_1 (HMM E-Value=2.2e-11) 32 0.36 SB_9297| Best HMM Match : RVT_1 (HMM E-Value=7e-21) 32 0.36 SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) 32 0.36 SB_31326| Best HMM Match : rve (HMM E-Value=6.1e-07) 32 0.48 SB_40280| Best HMM Match : C2 (HMM E-Value=1.8e-05) 31 0.63 SB_46749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15) 29 2.5 SB_44820| Best HMM Match : 7tm_1 (HMM E-Value=9e-15) 29 2.5 SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4 SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07) 28 5.9 SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0) 28 5.9 SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 28 5.9 SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7 >SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1574 Score = 36.3 bits (80), Expect = 0.022 Identities = 19/68 (27%), Positives = 33/68 (48%) Frame = +1 Query: 439 HQDLGRLLIDHQIHIRINLNLVIPSITESANPSSHSAAAITAPGGLVRPGGTRPNRSKPQ 618 H+ R L Q + LN +PS ++S +P+ + + P G + N SK Sbjct: 964 HRQSSRRLASQQESQQSLLNAPLPSSSKSISPTLSGSGPLGQPDGSAGQSSSSGNTSKGP 1023 Query: 619 KASFGNPI 642 ++S+GNP+ Sbjct: 1024 RSSWGNPL 1031 >SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32) Length = 546 Score = 32.7 bits (71), Expect = 0.27 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 320 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKEVATSRTTAYNPEGN 375 >SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32) Length = 517 Score = 32.7 bits (71), Expect = 0.27 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 320 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKEVATSRTTAYNPEGN 375 >SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) Length = 2160 Score = 32.3 bits (70), Expect = 0.36 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 891 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 946 >SB_53279| Best HMM Match : rve (HMM E-Value=5.2e-36) Length = 337 Score = 32.3 bits (70), Expect = 0.36 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 175 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 230 >SB_49675| Best HMM Match : rve (HMM E-Value=5.2e-36) Length = 412 Score = 32.3 bits (70), Expect = 0.36 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 160 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 215 >SB_48115| Best HMM Match : rve (HMM E-Value=5.3e-36) Length = 238 Score = 32.3 bits (70), Expect = 0.36 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 76 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 131 >SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) Length = 998 Score = 32.3 bits (70), Expect = 0.36 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 938 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 993 >SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07) Length = 409 Score = 32.3 bits (70), Expect = 0.36 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 349 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 404 >SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36) Length = 1022 Score = 32.3 bits (70), Expect = 0.36 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 646 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 701 >SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36) Length = 748 Score = 32.3 bits (70), Expect = 0.36 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 493 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 548 >SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36) Length = 1048 Score = 32.3 bits (70), Expect = 0.36 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 920 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 975 >SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1258 Score = 32.3 bits (70), Expect = 0.36 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 1039 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 1094 >SB_35114| Best HMM Match : RVT_1 (HMM E-Value=2.2e-11) Length = 512 Score = 32.3 bits (70), Expect = 0.36 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 448 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 503 >SB_9297| Best HMM Match : RVT_1 (HMM E-Value=7e-21) Length = 1032 Score = 32.3 bits (70), Expect = 0.36 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 554 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 609 >SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) Length = 1677 Score = 32.3 bits (70), Expect = 0.36 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 922 TPTVIKCLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 977 >SB_31326| Best HMM Match : rve (HMM E-Value=6.1e-07) Length = 330 Score = 31.9 bits (69), Expect = 0.48 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 373 TPLLSICLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 TP + CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 270 TPTVIKCLTSVFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 325 >SB_40280| Best HMM Match : C2 (HMM E-Value=1.8e-05) Length = 485 Score = 31.5 bits (68), Expect = 0.63 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = +3 Query: 480 YKDKFKPSYPLHHRIS-QSQFTLRSSHNG-SWRISSTGWDETKPEQTTESKFRKP 638 Y+D+ KP Y HR+S Q T + H+ SWR + D + T +F P Sbjct: 215 YQDELKPGYQGEHRLSYQGSETSGTYHDAQSWRSQDSQLDTDSLDTFTSGEFLTP 269 >SB_46749| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 190 Score = 30.7 bits (66), Expect = 1.1 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = +1 Query: 454 RLLIDHQIHIRINLNLV-IPSITESANPSSHSAAAITAPGGLVRPGGT-RPNRSKPQKAS 627 R+LI Q HIR+ LV +PS + H ++ +P G RPG R N K Q S Sbjct: 124 RVLI-RQRHIRVRKQLVNVPSFVVRLDSQKHIDFSLNSPYGGGRPGRVKRKNMKKGQGGS 182 Query: 628 FG 633 G Sbjct: 183 GG 184 >SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15) Length = 615 Score = 29.5 bits (63), Expect = 2.5 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +1 Query: 391 CLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 423 CLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 472 >SB_44820| Best HMM Match : 7tm_1 (HMM E-Value=9e-15) Length = 456 Score = 29.5 bits (63), Expect = 2.5 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Frame = +1 Query: 301 PLPTVTTYLTG*ISCHHHHRLPACT-----PLLSICLTPRTTM-SGRPVRHRHQDLGR 456 P+ V L G I CH H +PA P L + R + +G PV RH+ GR Sbjct: 303 PIAGVNRQLYGFILCHLHVTIPALIIGIVYPRLIVIYRKRLVLGNGIPVASRHEQTGR 360 >SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1095 Score = 29.5 bits (63), Expect = 2.5 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +1 Query: 391 CLTPRTTMSGRPVRHRHQDLGRLLIDHQIHIRINLNLVIPSITESANPSSH 543 CLT TM G P + H D G LI ++ +N V S T + NP + Sbjct: 849 CLTSLFTMFGMPA-YVHSDRGSSLISQELRDFLNEKGVATSRTTAYNPEGN 898 >SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 929 Score = 28.7 bits (61), Expect = 4.4 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = +3 Query: 456 IVNRPPNPYKDKFKPSYPLHHRISQSQFTLRSSHNGSWRISSTGWDETKPEQTTESKFRK 635 I++RPP DK +PL HR +Q + +H+ R + W + + E +R Sbjct: 635 ILSRPPVRVNDKLM--FPLCHRCAQEEEQGSCTHSDEERAFTATWAHPEGYKALEKGYRV 692 Query: 636 PDLY 647 +Y Sbjct: 693 IRVY 696 >SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07) Length = 754 Score = 28.3 bits (60), Expect = 5.9 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +3 Query: 546 RSSHNGSWRISSTGWDETKPEQTTESKFRKPDLYL 650 R + S +SST D++ P++++ F +PD YL Sbjct: 360 RMTQPDSRNVSSTSRDKSSPDESSARGFTRPDGYL 394 >SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0) Length = 1325 Score = 28.3 bits (60), Expect = 5.9 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +3 Query: 180 QQHAFRRHVHHGTRTMGQPARRVGRSATPQHTRQGRIMALP----PAHGY 317 + F ++HH TRT G+ R T + RQ +A+P P H Y Sbjct: 455 EDQLFHAYLHHKTRTTGKHDSYSTRIYTTKRVRQVNTIAIPRVSTPRHVY 504 >SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) Length = 406 Score = 28.3 bits (60), Expect = 5.9 Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 5/75 (6%) Frame = +3 Query: 309 HGYYVSDRIDLMXXXXXXXRLYPTTQH--LPHPSHYNEWQASXXXXXXXXKIVNR---PP 473 H Y S I YPT +H PHP++ + S ++ PP Sbjct: 105 HPSYPSSHIQASLLPHIQHPSYPTYKHPPFPHPTYKHPSYPSPHIQASLLPLIPHTSIPP 164 Query: 474 NPYKDKFKPSYPLHH 518 P+ PSYP ++ Sbjct: 165 TPHPTYKHPSYPTYN 179 >SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1044 Score = 27.9 bits (59), Expect = 7.7 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Frame = +1 Query: 478 HIRINLNLVIPSITESANPSSHSAAAITAPGG-LVRPGGT 594 HI + P+ AN ++ + APGG V PGGT Sbjct: 679 HIHFSTGSPAPTSAPGANKTTAAGGTTAAPGGTTVAPGGT 718 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,631,804 Number of Sequences: 59808 Number of extensions: 473012 Number of successful extensions: 1407 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1237 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1395 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1693527500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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