Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31048
(609 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 190 1e-48
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 189 1e-48
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 187 5e-48
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 186 9e-48
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 2e-47
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 9e-47
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 179 2e-45
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 173 1e-43
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 3e-31
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 6e-25
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 76 2e-14
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 75 5e-14
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 73 1e-13
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 9e-12
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 67 9e-12
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 9e-12
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 65 5e-11
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 61 6e-10
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 47 1e-05
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 41 7e-04
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 40 0.002
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 35 0.059
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 28 5.1
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 27 9.0
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 190 bits (462), Expect = 1e-48
Identities = 89/124 (71%), Positives = 93/124 (75%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F L +GKEDAANNYARGHYT+GKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 437 RIRK 448
RIRK
Sbjct: 121 RIRK 124
Score = 188 bits (457), Expect = 4e-48
Identities = 88/123 (71%), Positives = 92/123 (74%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 260 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDR 439
P F L +GKEDAANNYARGHYT+GKEIVDLVLDR
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 440 IRK 448
IRK
Sbjct: 555 IRK 557
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
+LADQCTGLQGFLIFHSF
Sbjct: 124 KLADQCTGLQGFLIFHSF 141
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
+LADQCTGLQGFLIFHSF
Sbjct: 557 KLADQCTGLQGFLIFHSF 574
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 189 bits (461), Expect = 1e-48
Identities = 91/126 (72%), Positives = 93/126 (73%)
Frame = +2
Query: 71 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 250
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 251 GSTYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLV 430
G P F L +GKEDAANNYARGHYTIGKEIVDLV
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 182
Query: 431 LDRIRK 448
LDRIRK
Sbjct: 183 LDRIRK 188
Score = 187 bits (455), Expect = 7e-48
Identities = 86/124 (69%), Positives = 93/124 (75%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F L +GKEDAANNYARGHYT+GKE++DLVLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 437 RIRK 448
RIRK
Sbjct: 706 RIRK 709
Score = 134 bits (323), Expect = 7e-32
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 260 YP 265
P
Sbjct: 574 VP 575
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
+LADQCTGLQGFLIFHSF
Sbjct: 188 KLADQCTGLQGFLIFHSF 205
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
+LADQCTGLQGFLIFHSF
Sbjct: 709 KLADQCTGLQGFLIFHSF 726
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFVDLEPTV 297
F F + +HVPRAVFVDLEPTV
Sbjct: 561 FNTFFSETGAGKHVPRAVFVDLEPTV 586
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 187 bits (456), Expect = 5e-48
Identities = 87/123 (70%), Positives = 92/123 (74%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 260 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDR 439
P F L +GKEDAANNYARGHYT+GKEI+DLVLDR
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 440 IRK 448
IRK
Sbjct: 121 IRK 123
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
+LADQCTGLQGFLIFHSF G TSL+ L ++G+K
Sbjct: 123 KLADQCTGLQGFLIFHSFGGGTG-SGFTSLL-MERLSVDYGKK 163
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 186 bits (454), Expect = 9e-48
Identities = 87/124 (70%), Positives = 92/124 (74%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F L +GKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 437 RIRK 448
R RK
Sbjct: 121 RCRK 124
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
+LADQCTGLQGFLIFHSF
Sbjct: 124 KLADQCTGLQGFLIFHSF 141
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 185 bits (451), Expect = 2e-47
Identities = 86/123 (69%), Positives = 92/123 (74%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 260 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDR 439
P F L +GKEDAANNYARGHYT+GKE++DLVLDR
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 440 IRK 448
IRK
Sbjct: 926 IRK 928
Score = 180 bits (439), Expect = 6e-46
Identities = 82/123 (66%), Positives = 91/123 (73%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAG
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 260 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDR 439
P F L +GKEDAANNYARGHYT+GKE +D+VLDR
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 440 IRK 448
+RK
Sbjct: 493 LRK 495
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
+LADQCTGLQGFLIFHSF G TSL+ L ++G+K
Sbjct: 928 KLADQCTGLQGFLIFHSFGGGTG-SGFTSLL-MERLSVDYGKK 968
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSFRWKYRLLGLTSLI*WAALPFNFGEK 575
+LAD CTGLQGFLIFHSF G TSL+ L ++G+K
Sbjct: 495 KLADGCTGLQGFLIFHSFGGGTG-SGFTSLL-MERLSVDYGKK 535
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 183 bits (446), Expect = 9e-47
Identities = 84/124 (67%), Positives = 92/124 (74%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+G
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F L +GKEDAANNYARGHYT+GKE++D VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 437 RIRK 448
R+RK
Sbjct: 121 RLRK 124
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
+LAD CTGLQGFLIFHSF
Sbjct: 124 KLADGCTGLQGFLIFHSF 141
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 179 bits (435), Expect = 2e-45
Identities = 82/123 (66%), Positives = 90/123 (73%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 260 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDR 439
P F L +GKEDAANNYARGHYT+GK+ +D VLDR
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 440 IRK 448
IRK
Sbjct: 540 IRK 542
Score = 152 bits (368), Expect = 2e-37
Identities = 68/109 (62%), Positives = 78/109 (71%)
Frame = +2
Query: 122 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYPVXXXXXXXXXXX 301
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 302 XXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDRIRK 448
F L +GKEDAANNYARGHYT+GK+++++VLDR+RK
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRK 109
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
+LADQCTGLQGFLIFHSF
Sbjct: 109 KLADQCTGLQGFLIFHSF 126
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
+LADQC+GLQGFL+FHSF
Sbjct: 542 KLADQCSGLQGFLVFHSF 559
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 173 bits (420), Expect = 1e-43
Identities = 85/124 (68%), Positives = 90/124 (72%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAG
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P T L +GKEDAANNYARGHYTIGK+ VD VLD
Sbjct: 61 HVP----------RAVFVDLEPTVVALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 437 RIRK 448
R+RK
Sbjct: 111 RLRK 114
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
+LADQC+GLQGF IFHSF
Sbjct: 114 KLADQCSGLQGFFIFHSF 131
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFVDLEPTVV 300
F F + +HVPRAVFVDLEPTVV
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVV 75
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 132 bits (318), Expect = 3e-31
Identities = 57/63 (90%), Positives = 58/63 (92%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG G
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVR 312
F F +HVPRAVFVDLEP+VV ++
Sbjct: 49 FNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 111 bits (266), Expect = 6e-25
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 253
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +G
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASG 254
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 435 TESARLADQCTGLQGFLIFHSF 500
T S + ADQCTGLQGFL+FHSF
Sbjct: 251 TASGKHADQCTGLQGFLVFHSF 272
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 105 bits (252), Expect = 3e-23
Identities = 52/89 (58%), Positives = 56/89 (62%)
Frame = +2
Query: 182 MPTDKTIGGGDDSFNTFFSETGAGSTYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSG 361
MP+DKTIGGGDDSFNTFF+ETGAG P F L SG
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSG 60
Query: 362 KEDAANNYARGHYTIGKEIVDLVLDRIRK 448
KEDAANNYARGHYT+GKE +DL LDRIRK
Sbjct: 61 KEDAANNYARGHYTVGKEHIDLALDRIRK 89
Score = 74.5 bits (175), Expect = 6e-14
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 354
F F + +HVPRAVFVDLEPTV+DE+RTGTYRQLFHPEQL+
Sbjct: 14 FNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLL 58
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
+LADQCTGLQGFLIFHSF
Sbjct: 89 KLADQCTGLQGFLIFHSF 106
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 76.2 bits (179), Expect = 2e-14
Identities = 44/129 (34%), Positives = 57/129 (44%)
Frame = +2
Query: 62 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 241
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNE 266
Query: 242 TGAGSTYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIV 421
G P F +N G+ A NN+A+GHYT G E+V
Sbjct: 267 ATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV 326
Query: 422 DLVLDRIRK 448
D VLD +RK
Sbjct: 327 DSVLDVVRK 335
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCGQQLCPWSLHHW 408
++VPRAV VDLEP +D VR+G + Q+F P+ +F G W+ H+
Sbjct: 271 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN---WAKGHY 319
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 74.9 bits (176), Expect = 5e-14
Identities = 42/124 (33%), Positives = 57/124 (45%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLD 118
Query: 437 RIRK 448
+RK
Sbjct: 119 VVRK 122
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCGQQLCPWSLHHW 408
++VPR+V +DLEP +D VR+G + Q+F P+ +F G W+ H+
Sbjct: 58 KYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN---WAKGHY 106
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/124 (33%), Positives = 55/124 (44%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 257 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLD 436
P F +N G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
Query: 437 RIRK 448
+RK
Sbjct: 119 VVRK 122
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCGQQLCPWSLHHW 408
++VPRA+ VDLEP +D VR+G + Q+F P+ +F G W+ H+
Sbjct: 58 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN---WAKGHY 106
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 67.3 bits (157), Expect = 9e-12
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +2
Query: 335 FIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDRIRK 448
F L +GKEDAANNYARGHYT+GKE++DLVLDRIRK
Sbjct: 24 FHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 61
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1
Query: 295 VVDEVRTGTYRQLFHPEQLI 354
+ DEVRTGTYRQLFHPEQLI
Sbjct: 11 LADEVRTGTYRQLFHPEQLI 30
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
+LADQCTGLQGFLIFHSF
Sbjct: 61 KLADQCTGLQGFLIFHSF 78
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 67.3 bits (157), Expect = 9e-12
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +2
Query: 335 FIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDRIRK 448
F L +GKEDAANNYARGHYT+GKE++DLVLDRIRK
Sbjct: 12 FHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
+LADQCTGLQGFLIFHSF
Sbjct: 49 KLADQCTGLQGFLIFHSF 66
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 304 EVRTGTYRQLFHPEQLI 354
EVRTGTYRQLFHPEQLI
Sbjct: 2 EVRTGTYRQLFHPEQLI 18
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 67.3 bits (157), Expect = 9e-12
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +2
Query: 335 FIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDRIRK 448
F L +GKEDAANNYARGHYT+GKE++DLVLDRIRK
Sbjct: 12 FHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 304 EVRTGTYRQLFHPEQLI 354
EVRTGTYRQLFHPEQLI
Sbjct: 2 EVRTGTYRQLFHPEQLI 18
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 64.9 bits (151), Expect = 5e-11
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = +2
Query: 335 FIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDRIRK 448
F L SGKEDAANNYARGHYT+GKE +DL LDRIRK
Sbjct: 12 FHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRK 49
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
+LADQCTGLQGFLIFHSF
Sbjct: 49 KLADQCTGLQGFLIFHSF 66
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1
Query: 304 EVRTGTYRQLFHPEQLI 354
E+RTGTYRQLFHPEQL+
Sbjct: 2 EIRTGTYRQLFHPEQLL 18
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/33 (78%), Positives = 32/33 (96%)
Frame = +2
Query: 350 LYSGKEDAANNYARGHYTIGKEIVDLVLDRIRK 448
+ SGKEDAANNYARGHYTIGKE+V++V+D+IRK
Sbjct: 1003 MISGKEDAANNYARGHYTIGKEMVEVVMDKIRK 1035
Score = 62.1 bits (144), Expect = 3e-10
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 354
++VPRAV VDLEPTV+DEVRTG YR L+HPEQ+I
Sbjct: 971 KYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMI 1004
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3
Query: 447 RLADQCTGLQGFLIFHSF 500
++ DQC+GLQGFLIFHSF
Sbjct: 1035 KMTDQCSGLQGFLIFHSF 1052
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 61.3 bits (142), Expect = 6e-10
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2
Query: 335 FIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDRIRK 448
F + L +GKEDAANNYARGHYT+GKE +DL L++IRK
Sbjct: 12 FHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
Score = 34.7 bits (76), Expect = 0.059
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 304 EVRTGTYRQLFHPEQLI 354
EVR GTYR LFHP+QLI
Sbjct: 2 EVRMGTYRDLFHPDQLI 18
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCGQQLCPWSLHHW 408
++VPRAV VDLEP +D VR+G + Q+F P+ +F G W+ H+
Sbjct: 3 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN---WAKGHY 51
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +2
Query: 335 FIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDRIRK 448
F +N G+ A NN+A+GHYT G E+VD VLD +RK
Sbjct: 30 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 67
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 46.0 bits (104), Expect = 2e-05
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIF 357
++VPRA+ VDLEP +D VR+G + Q+F P+ +F
Sbjct: 58 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 257 TYP 265
P
Sbjct: 59 YVP 61
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +2
Query: 335 FIQNNLYSGKEDAANNYARGHYTIGKEIVDLVLDRIRK 448
F +N + + AANN+A+GHY+ G E++D + D +RK
Sbjct: 41 FRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRK 78
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 253 QHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 354
++VPR++ VDLEP +D VR G +F P+ +
Sbjct: 14 RYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFV 47
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 453 ADQCTGLQGFLIFHSF 500
ADQCTGLQGFLIFHSF
Sbjct: 1 ADQCTGLQGFLIFHSF 16
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 34.7 bits (76), Expect = 0.059
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 362 KEDAANNYARGHYTIGKEIVDLVLDRIRK 448
+ AANN+A+G YT G E++D +D IRK
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRK 30
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 137 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 241
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 212 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 102
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 265 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLIFW*GRCG 375
RAV +D+E VV+ + G +F +QLI CG
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCG 112
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 183 CPQTRPSGVETILSTLSSARPELAARTP 266
CP RPSG T SA+P+ A R P
Sbjct: 476 CPTLRPSGFGDNTCTQPSAKPKPAPRPP 503
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,643,070
Number of Sequences: 59808
Number of extensions: 457741
Number of successful extensions: 1347
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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