Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS31017
(862 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 71 5e-14
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 71 5e-14
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 71 5e-14
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 71 5e-14
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 27 0.97
U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase... 24 5.2
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 24 5.2
AJ441131-4|CAD29633.1| 566|Anopheles gambiae putative apyrase/n... 24 6.8
AJ439398-3|CAD28126.1| 566|Anopheles gambiae putative 5' nucleo... 24 6.8
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 24 6.8
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 9.0
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 23 9.0
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.9 bits (166), Expect = 5e-14
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +3
Query: 6 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP
Sbjct: 109 RTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 168
Query: 186 VISAEKAYHEQLSVAEIT 239
+ S + L+V E+T
Sbjct: 169 LTSRGSQQYRALTVPELT 186
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.9 bits (166), Expect = 5e-14
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +3
Query: 6 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP
Sbjct: 109 RTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 168
Query: 186 VISAEKAYHEQLSVAEIT 239
+ S + L+V E+T
Sbjct: 169 LTSRGSQQYRALTVPELT 186
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.9 bits (166), Expect = 5e-14
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +3
Query: 6 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP
Sbjct: 109 RTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 168
Query: 186 VISAEKAYHEQLSVAEIT 239
+ S + L+V E+T
Sbjct: 169 LTSRGSQQYRALTVPELT 186
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.9 bits (166), Expect = 5e-14
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +3
Query: 6 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 185
R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP
Sbjct: 109 RTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 168
Query: 186 VISAEKAYHEQLSVAEIT 239
+ S + L+V E+T
Sbjct: 169 LTSRGSQQYRALTVPELT 186
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.6 bits (56), Expect = 0.97
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +1
Query: 109 MWTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSRQPDGEMRPP 285
+WT P+ TW P +T+ WS + T+ + P+ + THA + PP
Sbjct: 158 IWTDPT---TWS-APTTTTTWSDQPRPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPP 212
>U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase
protein.
Length = 260
Score = 24.2 bits (50), Expect = 5.2
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Frame = -3
Query: 602 YLHRRTSARKHAWRNMRSKLVGQG---------EPQASAMGWCWTTCRRHVEPWPSRLRA 450
Y+ + + KH R ++ L Q P + + W+T +RHV+ P+R
Sbjct: 159 YIFQHDNDSKHTSRTVKCYLANQDVQVLPWPALSPDLNPIENLWSTLKRHVKNQPARSAD 218
Query: 449 PRW 441
W
Sbjct: 219 DLW 221
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 24.2 bits (50), Expect = 5.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 680 PNWVPGPPFGG 648
P W P PPFGG
Sbjct: 94 PPWHPRPPFGG 104
>AJ441131-4|CAD29633.1| 566|Anopheles gambiae putative
apyrase/nucleotidase protein.
Length = 566
Score = 23.8 bits (49), Expect = 6.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 572 AFVHWYVGEGMKEGEFSEAREG 637
AFV +YVG G E E++ A G
Sbjct: 387 AFVDYYVGRGEAEHEWTYAAIG 408
>AJ439398-3|CAD28126.1| 566|Anopheles gambiae putative 5'
nucleotidase protein.
Length = 566
Score = 23.8 bits (49), Expect = 6.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 572 AFVHWYVGEGMKEGEFSEAREG 637
AFV +YVG G E E++ A G
Sbjct: 387 AFVDYYVGRGEAEHEWTYAAIG 408
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 23.8 bits (49), Expect = 6.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1
Query: 349 VHILGYDVTTVQHTASHV 296
+H + Y ++TV HTAS++
Sbjct: 733 IHTIEYVLSTVSHTASYL 750
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 23.4 bits (48), Expect = 9.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 496 QHADGTLNLGQVASGH 449
+H D T +L QV SGH
Sbjct: 971 KHGDMTFHLAQVLSGH 986
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 23.4 bits (48), Expect = 9.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 496 QHADGTLNLGQVASGH 449
+H D T +L QV SGH
Sbjct: 983 KHGDVTFHLSQVLSGH 998
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,081,640
Number of Sequences: 2352
Number of extensions: 28769
Number of successful extensions: 58
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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