Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30025
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    24   1.5  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    24   1.5  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    24   1.5  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   3.4  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 420 SDFPFVWNKIQELMRIKKDNSW 485
           SD+ + W+  Q++  I K N W
Sbjct: 308 SDWDYFWDDEQQVPHIVKGNQW 329


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 420 SDFPFVWNKIQELMRIKKDNSW 485
           SD+ + W+  Q++  I K N W
Sbjct: 309 SDWDYFWDDEQQVPHIVKGNQW 330


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 420 SDFPFVWNKIQELMRIKKDNSW 485
           SD+ + W+  Q++  I K N W
Sbjct: 309 SDWDYFWDDEQQVPHIVKGNQW 330


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 729 PIAKIFAGPIWYANLLGKPFSND 661
           P+      P  Y+NLL +P SND
Sbjct: 80  PVIDPAKDPAIYSNLLPRPGSND 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,533
Number of Sequences: 336
Number of extensions: 3997
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)