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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20920
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58086-1|AAC47123.1|  803|Caenorhabditis elegans CUL-4 protein.        79   5e-15
U29536-1|AAA68791.3|  840|Caenorhabditis elegans Cullin protein ...    79   5e-15
U58085-1|AAC47122.1|  780|Caenorhabditis elegans CUL-3 protein.        64   1e-10
AC024744-3|AAK72067.1|  777|Caenorhabditis elegans Cullin protei...    64   1e-10
Z92822-5|CAD45612.3|  743|Caenorhabditis elegans Hypothetical pr...    60   2e-09
Z92822-4|CAD18893.2|  791|Caenorhabditis elegans Hypothetical pr...    60   2e-09
Z92822-3|CAB07302.3|  774|Caenorhabditis elegans Hypothetical pr...    60   2e-09
Z92822-2|CAB70188.2|  850|Caenorhabditis elegans Hypothetical pr...    60   2e-09
U58084-1|AAC47121.1|  743|Caenorhabditis elegans CUL-2 protein.        60   2e-09
Z35639-3|CAA84695.2|  780|Caenorhabditis elegans Hypothetical pr...    55   5e-08
U58083-1|AAC47120.1|  780|Caenorhabditis elegans CUL-1 protein.        55   5e-08
Z70783-1|CAA94852.2|  765|Caenorhabditis elegans Hypothetical pr...    45   7e-05
Z77666-5|CAB01230.1|  729|Caenorhabditis elegans Hypothetical pr...    39   0.005
Z99280-6|CAB16502.1|  418|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z82284-9|CAB05295.1|  418|Caenorhabditis elegans Hypothetical pr...    31   1.3  
U41556-10|AAM51520.1|  415|Caenorhabditis elegans Hypothetical p...    30   1.7  

>U58086-1|AAC47123.1|  803|Caenorhabditis elegans CUL-4 protein.
          Length = 803

 Score = 78.6 bits (185), Expect = 5e-15
 Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
 Frame = +3

Query: 210 DNGFVPFHTRQG--CF*AFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEG 383
           D   V F   +G   F A+YK+ LAKRL + +SASVDAEK +L KLK ECG  FT KLEG
Sbjct: 468 DEAIVLFRYLRGKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLEG 527

Query: 384 MFKDMELSKDINITYKQ 434
           MFKDM+ S++    + Q
Sbjct: 528 MFKDMDASENYGRLFNQ 544



 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 35/94 (37%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
 Frame = +1

Query: 1   LDFKEQLDHVVNTCFQR-ND--KFIYSMREAFEFFINQRQNKPAELIAKFVDLKLRAGNK 171
           L FK+++D ++   F+  ND  K    + +AFE F+N++ ++ AELI+K     L + NK
Sbjct: 396 LAFKKKVDFIMTGSFKSANDPVKMRQCLSDAFESFVNKQVDRSAELISKHFHTLLHSSNK 455

Query: 172 EATEEE-LERLLDKIMVLFRFIHGKDVFELSIKR 270
             +++  L++++D+ +VLFR++ GKDVFE   KR
Sbjct: 456 NVSDDTTLDQMVDEAIVLFRYLRGKDVFEAYYKR 489


>U29536-1|AAA68791.3|  840|Caenorhabditis elegans Cullin protein 4
           protein.
          Length = 840

 Score = 78.6 bits (185), Expect = 5e-15
 Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
 Frame = +3

Query: 210 DNGFVPFHTRQG--CF*AFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEG 383
           D   V F   +G   F A+YK+ LAKRL + +SASVDAEK +L KLK ECG  FT KLEG
Sbjct: 505 DEAIVLFRYLRGKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLEG 564

Query: 384 MFKDMELSKDINITYKQ 434
           MFKDM+ S++    + Q
Sbjct: 565 MFKDMDASENYGRLFNQ 581



 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 35/94 (37%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
 Frame = +1

Query: 1   LDFKEQLDHVVNTCFQR-ND--KFIYSMREAFEFFINQRQNKPAELIAKFVDLKLRAGNK 171
           L FK+++D ++   F+  ND  K    + +AFE F+N++ ++ AELI+K     L + NK
Sbjct: 433 LAFKKKVDFIMTGSFKSANDPVKMRQCLSDAFESFVNKQVDRSAELISKHFHTLLHSSNK 492

Query: 172 EATEEE-LERLLDKIMVLFRFIHGKDVFELSIKR 270
             +++  L++++D+ +VLFR++ GKDVFE   KR
Sbjct: 493 NVSDDTTLDQMVDEAIVLFRYLRGKDVFEAYYKR 526


>U58085-1|AAC47122.1|  780|Caenorhabditis elegans CUL-3 protein.
          Length = 780

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = +3

Query: 210 DNGFVPFHTRQ--GCF*AFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEG 383
           DN  + F   Q    F  ++K+ LAKRLL+ KS S D EK++L+KLK ECG  FT KLE 
Sbjct: 419 DNVMILFRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLEN 478

Query: 384 MFKDMEL 404
           MF+D EL
Sbjct: 479 MFRDKEL 485



 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 30/90 (33%), Positives = 50/90 (55%)
 Frame = +1

Query: 1   LDFKEQLDHVVNTCFQRNDKFIYSMREAFEFFINQRQNKPAELIAKFVDLKLRAGNKEAT 180
           L  K+    ++ T F  +  F    +  FE F+N  +  P E +A ++D  LR+G K  +
Sbjct: 352 LQLKDYFSSLLTTAFADDRDFKNRFQHDFETFLNSNRQSP-EFVALYMDDMLRSGLKCVS 410

Query: 181 EEELERLLDKIMVLFRFIHGKDVFELSIKR 270
           + E++  LD +M+LFR++  KDVFE   K+
Sbjct: 411 DAEMDNKLDNVMILFRYLQEKDVFEKYFKQ 440


>AC024744-3|AAK72067.1|  777|Caenorhabditis elegans Cullin protein 3
           protein.
          Length = 777

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = +3

Query: 210 DNGFVPFHTRQ--GCF*AFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEG 383
           DN  + F   Q    F  ++K+ LAKRLL+ KS S D EK++L+KLK ECG  FT KLE 
Sbjct: 419 DNVMILFRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLEN 478

Query: 384 MFKDMEL 404
           MF+D EL
Sbjct: 479 MFRDKEL 485



 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 30/90 (33%), Positives = 50/90 (55%)
 Frame = +1

Query: 1   LDFKEQLDHVVNTCFQRNDKFIYSMREAFEFFINQRQNKPAELIAKFVDLKLRAGNKEAT 180
           L  K+    ++ T F  +  F    +  FE F+N  +  P E +A ++D  LR+G K  +
Sbjct: 352 LQLKDYFSSLLTTAFADDRDFKNRFQHDFETFLNSNRQSP-EFVALYMDDMLRSGLKCVS 410

Query: 181 EEELERLLDKIMVLFRFIHGKDVFELSIKR 270
           + E++  LD +M+LFR++  KDVFE   K+
Sbjct: 411 DAEMDNKLDNVMILFRYLQEKDVFEKYFKQ 440


>Z92822-5|CAD45612.3|  743|Caenorhabditis elegans Hypothetical
           protein ZK520.4d protein.
          Length = 743

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = +3

Query: 249 F*AFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 419
           F  FY K LA RL+   S S+DAE+ M++KLKQ CG  FT KL  MF D+ LS++++
Sbjct: 448 FQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELS 504



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
 Frame = +1

Query: 43  FQRNDKFIYSMREAFEFFINQRQN-----KPAELIAKFVDLKLRAGNKEATEEELERLLD 207
           F  + +F   + +A +  +N ++      K +E +A++ D  L+   K  +E +LE  LD
Sbjct: 374 FMDDGEFSSGLDKALQGVVNSKEPGQSVPKASERLARYTDGLLKKSTKGLSETDLEAKLD 433

Query: 208 KIMVLFRFIHGKDVFE 255
             +V+FR+I  KD+F+
Sbjct: 434 SAIVIFRYIEDKDIFQ 449


>Z92822-4|CAD18893.2|  791|Caenorhabditis elegans Hypothetical
           protein ZK520.4c protein.
          Length = 791

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = +3

Query: 249 F*AFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 419
           F  FY K LA RL+   S S+DAE+ M++KLKQ CG  FT KL  MF D+ LS++++
Sbjct: 465 FQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELS 521



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
 Frame = +1

Query: 43  FQRNDKFIYSMREAFEFFINQRQN-----KPAELIAKFVDLKLRAGNKEATEEELERLLD 207
           F  + +F   + +A +  +N ++      K +E +A++ D  L+   K  +E +LE  LD
Sbjct: 391 FMDDGEFSSGLDKALQGVVNSKEPGQSVPKASERLARYTDGLLKKSTKGLSETDLEAKLD 450

Query: 208 KIMVLFRFIHGKDVFE 255
             +V+FR+I  KD+F+
Sbjct: 451 SAIVIFRYIEDKDIFQ 466


>Z92822-3|CAB07302.3|  774|Caenorhabditis elegans Hypothetical
           protein ZK520.4b protein.
          Length = 774

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = +3

Query: 249 F*AFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 419
           F  FY K LA RL+   S S+DAE+ M++KLKQ CG  FT KL  MF D+ LS++++
Sbjct: 448 FQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELS 504



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
 Frame = +1

Query: 43  FQRNDKFIYSMREAFEFFINQRQN-----KPAELIAKFVDLKLRAGNKEATEEELERLLD 207
           F  + +F   + +A +  +N ++      K +E +A++ D  L+   K  +E +LE  LD
Sbjct: 374 FMDDGEFSSGLDKALQGVVNSKEPGQSVPKASERLARYTDGLLKKSTKGLSETDLEAKLD 433

Query: 208 KIMVLFRFIHGKDVFE 255
             +V+FR+I  KD+F+
Sbjct: 434 SAIVIFRYIEDKDIFQ 449


>Z92822-2|CAB70188.2|  850|Caenorhabditis elegans Hypothetical
           protein ZK520.4a protein.
          Length = 850

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = +3

Query: 249 F*AFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 419
           F  FY K LA RL+   S S+DAE+ M++KLKQ CG  FT KL  MF D+ LS++++
Sbjct: 524 FQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELS 580



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
 Frame = +1

Query: 43  FQRNDKFIYSMREAFEFFINQRQN-----KPAELIAKFVDLKLRAGNKEATEEELERLLD 207
           F  + +F   + +A +  +N ++      K +E +A++ D  L+   K  +E +LE  LD
Sbjct: 450 FMDDGEFSSGLDKALQGVVNSKEPGQSVPKASERLARYTDGLLKKSTKGLSETDLEAKLD 509

Query: 208 KIMVLFRFIHGKDVFE 255
             +V+FR+I  KD+F+
Sbjct: 510 SAIVIFRYIEDKDIFQ 525


>U58084-1|AAC47121.1|  743|Caenorhabditis elegans CUL-2 protein.
          Length = 743

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = +3

Query: 249 F*AFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 419
           F  FY K LA RL+   S S+DAE+ M++KLKQ CG  FT KL  MF D+ LS++++
Sbjct: 448 FQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELS 504



 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
 Frame = +1

Query: 43  FQRNDKFIYSMREAFEFFINQR---QNKP--AELIAKFVDLKLRAGNKEATEEELERLLD 207
           F  + +F   + +A +  +N +   Q+ P  +E +A++ D  L+   K  +E +LE  LD
Sbjct: 374 FMDDGEFSSGLDKALQGVVNSKEPGQSVPNGSERLARYTDGLLKKSTKGLSETDLEAKLD 433

Query: 208 KIMVLFRFIHGKDVFE 255
             +V+FR+I  KD+F+
Sbjct: 434 SAIVIFRYIEDKDIFQ 449


>Z35639-3|CAA84695.2|  780|Caenorhabditis elegans Hypothetical
           protein D2045.6 protein.
          Length = 780

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
 Frame = +1

Query: 1   LDFKEQLDHVVNTCFQRNDKFIYSMREAFEFFIN----------QRQ-NKPAELIAKFVD 147
           L+  E+   +VN  F+    F+ S+ +A   FIN          Q Q  K AEL+A++ D
Sbjct: 372 LEVHERYQSLVNRSFKNEPGFMQSLDKAATSFINNNAVTKRAPPQAQLTKSAELLARYCD 431

Query: 148 LKLRAGNKEATEEELERLLDKIMVLFRFIHGKDVF 252
             LR  +K   E ELE L  KIMV+F++I  KDVF
Sbjct: 432 QLLRKSSKMPDEAELEELQTKIMVVFKYIDDKDVF 466



 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 29/85 (34%), Positives = 50/85 (58%)
 Frame = +3

Query: 249 F*AFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDINITY 428
           F  FY K  +KRL+   SAS +AE + ++KLK  CG  +T +L  M  D ++SKD+   +
Sbjct: 466 FSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLTADF 525

Query: 429 KQVNCTDSRYRIIGEFSMSYYILLL 503
           K     + +  ++G+ S+ + +L+L
Sbjct: 526 K-----EKKADMLGQKSVEFNVLVL 545


>U58083-1|AAC47120.1|  780|Caenorhabditis elegans CUL-1 protein.
          Length = 780

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
 Frame = +1

Query: 1   LDFKEQLDHVVNTCFQRNDKFIYSMREAFEFFIN----------QRQ-NKPAELIAKFVD 147
           L+  E+   +VN  F+    F+ S+ +A   FIN          Q Q  K AEL+A++ D
Sbjct: 372 LEVHERYQSLVNRSFKNEPGFMQSLDKAATSFINNNAVTKRAPPQAQLTKSAELLARYCD 431

Query: 148 LKLRAGNKEATEEELERLLDKIMVLFRFIHGKDVF 252
             LR  +K   E ELE L  KIMV+F++I  KDVF
Sbjct: 432 QLLRKSSKMPDEAELEELQTKIMVVFKYIDDKDVF 466



 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 29/85 (34%), Positives = 50/85 (58%)
 Frame = +3

Query: 249 F*AFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDINITY 428
           F  FY K  +KRL+   SAS +AE + ++KLK  CG  +T +L  M  D ++SKD+   +
Sbjct: 466 FSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLTADF 525

Query: 429 KQVNCTDSRYRIIGEFSMSYYILLL 503
           K     + +  ++G+ S+ + +L+L
Sbjct: 526 K-----EKKADMLGQKSVEFNVLVL 545


>Z70783-1|CAA94852.2|  765|Caenorhabditis elegans Hypothetical
           protein ZK856.1 protein.
          Length = 765

 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
 Frame = +3

Query: 249 F*AFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECG--GGFTCKLEGMFKDMELSKDINI 422
           F  F++  L++RL++  SA  + E+ M++KL+ ECG       KL  M +D+EL+KD+N 
Sbjct: 430 FMRFHRAHLSRRLILEMSADQEKEEMMVTKLR-ECGMPSDAVNKLSRMLQDIELNKDMNS 488

Query: 423 TYKQ 434
           ++K+
Sbjct: 489 SFKK 492



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 18/50 (36%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
 Frame = +1

Query: 109 QNKPAELIAKFVDLKLRAG--NKEATEEELERLLDKIMVLFRFIHGKDVF 252
           ++K AEL+A + DL LR    +K+ T EE++  L++++++ +++  KDVF
Sbjct: 381 ESKCAELLANYCDLLLRKTQLSKKLTSEEIDEKLNQVLLVLKYVENKDVF 430


>Z77666-5|CAB01230.1|  729|Caenorhabditis elegans Hypothetical
           protein K08E7.7 protein.
          Length = 729

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 20/68 (29%), Positives = 36/68 (52%)
 Frame = +3

Query: 249 F*AFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDINITY 428
           F  +Y+   ++R++   SAS DAE+  ++ L    G  +T  L  M +D ++SKD+   +
Sbjct: 418 FQLYYQNWFSERIINNSSASDDAEEKFITNLTATEGLEYTRNLVKMVEDAKISKDLTTEF 477

Query: 429 KQVNCTDS 452
           K +    S
Sbjct: 478 KDIKTEKS 485



 Score = 36.7 bits (81), Expect = 0.019
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
 Frame = +1

Query: 1   LDFKEQLDHVVNTCFQRNDKFIYSMREAFEFFIN-----------QRQNKPAELIAKFVD 147
           L+  E   +++N  F RN  F+ S+ +A + FI             R  + A+ +A++ D
Sbjct: 328 LEVHEIYFNLINKAFDRNALFMQSLDKASKDFIEANAVTMLAPEKHRSTRSADYLARYCD 387

Query: 148 LKLRAGNKEATEEELERLLDKIMVLFRFIHGKDVFEL 258
             L+  +K   E  L    DK + + ++I  KDVF+L
Sbjct: 388 QLLKKNSKVQDETAL----DKALTVLKYISEKDVFQL 420


>Z99280-6|CAB16502.1|  418|Caenorhabditis elegans Hypothetical
           protein Y57G11B.1 protein.
          Length = 418

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 52  NDKFIYSMREAFEFFIN-QRQNKPAELIAKFVDLKLRAGNKEATEEELERLLDKIMVLFR 228
           ++K   +M+ AF   +N QR+N    L++ F  L           E++++LLD + +   
Sbjct: 235 HEKISENMKNAFNALLNVQRENNAKHLVSNFQQLF-------EPVEDVKKLLDSVKIKIE 287

Query: 229 FIHGKD 246
            + GKD
Sbjct: 288 LVDGKD 293


>Z82284-9|CAB05295.1|  418|Caenorhabditis elegans Hypothetical
           protein Y57G11B.1 protein.
          Length = 418

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 52  NDKFIYSMREAFEFFIN-QRQNKPAELIAKFVDLKLRAGNKEATEEELERLLDKIMVLFR 228
           ++K   +M+ AF   +N QR+N    L++ F  L           E++++LLD + +   
Sbjct: 235 HEKISENMKNAFNALLNVQRENNAKHLVSNFQQLF-------EPVEDVKKLLDSVKIKIE 287

Query: 229 FIHGKD 246
            + GKD
Sbjct: 288 LVDGKD 293


>U41556-10|AAM51520.1|  415|Caenorhabditis elegans Hypothetical
           protein C25B8.7 protein.
          Length = 415

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -3

Query: 101 LIKNSKASLIEYMNLSFLWKHVLTTWSSCSL 9
           +IK S AS IE    SF +    T W+SCSL
Sbjct: 246 VIKTSSASKIENKATSFAFIFATTLWTSCSL 276


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,703,709
Number of Sequences: 27780
Number of extensions: 398034
Number of successful extensions: 991
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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