Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20911
(659 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2066| Best HMM Match : Dynein_heavy (HMM E-Value=0) 30 1.5
SB_54465| Best HMM Match : PufQ (HMM E-Value=1.6) 29 3.4
SB_42669| Best HMM Match : Sorb (HMM E-Value=9.2) 29 4.4
SB_35522| Best HMM Match : AT_hook (HMM E-Value=7.3) 29 4.4
SB_35509| Best HMM Match : Sorb (HMM E-Value=9.2) 29 4.4
SB_33398| Best HMM Match : Sorb (HMM E-Value=9.9) 29 4.4
SB_33087| Best HMM Match : Fascin (HMM E-Value=8.9) 29 4.4
SB_30852| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.4
SB_27867| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_26585| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.4
SB_26303| Best HMM Match : Fascin (HMM E-Value=4.4) 29 4.4
SB_22717| Best HMM Match : RuvA_C (HMM E-Value=7) 29 4.4
SB_13686| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_9025| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_6247| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_3473| Best HMM Match : Fascin (HMM E-Value=4.4) 29 4.4
SB_42310| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.4
SB_36813| Best HMM Match : RVT_1 (HMM E-Value=1.4e-14) 29 4.4
SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0) 29 4.4
SB_30215| Best HMM Match : RVT_1 (HMM E-Value=2.6e-34) 29 4.4
SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.4
SB_14288| Best HMM Match : Sorb (HMM E-Value=9.9) 29 4.4
SB_10495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_10251| Best HMM Match : RVT_1 (HMM E-Value=0.0022) 29 4.4
SB_9596| Best HMM Match : BAF (HMM E-Value=1.54143e-44) 29 4.4
SB_8605| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.4
SB_7670| Best HMM Match : Sorb (HMM E-Value=9.2) 29 4.4
SB_3943| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_63| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.4
SB_57323| Best HMM Match : ShTK (HMM E-Value=0) 28 5.9
SB_42739| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-21) 28 5.9
SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_54863| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_40960| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_2066| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 1256
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 338 ISVDLQLLLCGSSEEFRGHACRGSINLSIIEHFSFTIC 451
++ D ++ + G+ EEFR A RGSI +I S+ C
Sbjct: 439 VAADTEIKINGAREEFRPVATRGSILYFLIVEMSYVNC 476
>SB_54465| Best HMM Match : PufQ (HMM E-Value=1.6)
Length = 379
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 345 TDILHKSWRTGTCSPFCDIRSREMKDY 265
T I+ K+WR CSPF + + +K Y
Sbjct: 90 TSIVGKTWRVHCCSPFHKLCYKNLKQY 116
>SB_42669| Best HMM Match : Sorb (HMM E-Value=9.2)
Length = 347
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 123 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 153
>SB_35522| Best HMM Match : AT_hook (HMM E-Value=7.3)
Length = 250
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 100 NSKCTSKYKSKYFRVHHFNAL 38
N C +YKSK V HFNA+
Sbjct: 167 NDACFDRYKSKLLEVAHFNAV 187
>SB_35509| Best HMM Match : Sorb (HMM E-Value=9.2)
Length = 256
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 32 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 62
>SB_33398| Best HMM Match : Sorb (HMM E-Value=9.9)
Length = 347
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 123 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 153
>SB_33087| Best HMM Match : Fascin (HMM E-Value=8.9)
Length = 347
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 123 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 153
>SB_30852| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 623
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 406 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 436
>SB_27867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 123 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 153
>SB_26585| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 317
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 232 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 262
>SB_26303| Best HMM Match : Fascin (HMM E-Value=4.4)
Length = 328
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 123 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 153
>SB_22717| Best HMM Match : RuvA_C (HMM E-Value=7)
Length = 256
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 32 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 62
>SB_13686| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 123 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 153
>SB_9025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 54 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 84
>SB_6247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 650 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 680
>SB_3473| Best HMM Match : Fascin (HMM E-Value=4.4)
Length = 208
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 123 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 153
>SB_42310| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 940
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 716 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 746
>SB_36813| Best HMM Match : RVT_1 (HMM E-Value=1.4e-14)
Length = 382
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 193 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 223
>SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1478
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 151 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 181
>SB_30215| Best HMM Match : RVT_1 (HMM E-Value=2.6e-34)
Length = 875
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 651 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 681
>SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1821
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 1597 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 1627
>SB_14288| Best HMM Match : Sorb (HMM E-Value=9.9)
Length = 347
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 123 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 153
>SB_10495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 258
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 123 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 153
>SB_10251| Best HMM Match : RVT_1 (HMM E-Value=0.0022)
Length = 717
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 596 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 626
>SB_9596| Best HMM Match : BAF (HMM E-Value=1.54143e-44)
Length = 759
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 542 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 572
>SB_8605| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 284
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 232 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 262
>SB_7670| Best HMM Match : Sorb (HMM E-Value=9.2)
Length = 215
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 32 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 62
>SB_3943| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 913 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 943
>SB_63| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 680
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 333 HKSWRTGTCSPFCDIRSREMKDYRSSRIMGL 241
H RT C P I ++E+K + SR++G+
Sbjct: 456 HHKLRTLPCKPSISIDNKELKQVQQSRVLGV 486
>SB_57323| Best HMM Match : ShTK (HMM E-Value=0)
Length = 911
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = +3
Query: 258 CCDNPSFHGYGCRKT----DCKFLYANSCEEYQLISNC 359
C +NP + C KT DC + +C+++Q + C
Sbjct: 611 CTNNPQWMNDNCAKTCGACDCMDNFPQACQDWQKVGEC 648
>SB_42739| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-21)
Length = 683
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 642 YQYFLVITKSTSIYRIHYIGILFNDIVFNVNQNYFSLL*KYIFLL-CYLNFMRSQCTGIQ 466
Y L+ Y++ Y + + D+V YF++ +YIFL+ C + + C G
Sbjct: 316 YAIILIFVVCYIPYQVFYF-LEYFDVVSYQKWRYFTVCRRYIFLITCLPSALHPLCYGTM 374
Query: 465 SK 460
SK
Sbjct: 375 SK 376
>SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1050
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3
Query: 387 RNSSEDPHSSSWRSTDILHKSWRTGTCSPFC 295
RN S +S + T + HK W C+ FC
Sbjct: 548 RNDSLGHYSCNANGTKVCHKDWYGDLCTTFC 578
>SB_54863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1251
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 208 DSSVYSYCSRKQAHDSAAAIILHFTATDVAKRTASSCTP 324
DS +SYC R H++ I+ A D + T + P
Sbjct: 914 DSEYFSYCIRNYIHENPDLILWELAANDYHRYTDRNMDP 952
>SB_40960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 169 PARPGAHPGCPLCDSSVYSYCSRKQAHDSAA 261
P R G P CP +S Y Y + +Q D+ A
Sbjct: 78 PRRLGKDPDCPCSESREYHYQASEQQGDTGA 108
>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3592
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 253 NHGLVYANSNYTLTSHIAGNR 191
NH YAN NY HI NR
Sbjct: 3307 NHNYPYANHNYPFAHHICPNR 3327
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,771,205
Number of Sequences: 59808
Number of extensions: 325595
Number of successful extensions: 1013
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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