Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20907
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    25   0.59 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   3.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   5.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   5.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 423 YISAFAMTRSPVTCKSLLKSTPFLIPFSWNLLS 325
           YI    +    VT  + + +TPF +P+ W +L+
Sbjct: 84  YIILIDLGEVAVTVLAGILTTPFKLPYFWKMLT 116


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 75  LLERRREVSTTTTPIPFPP 131
           +L  +  VS TT P P PP
Sbjct: 86  ILAEKVSVSPTTPPTPSPP 104



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -1

Query: 122 GNRCCC 105
           GN+CCC
Sbjct: 187 GNKCCC 192


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 370 KEYSIFNSVFMESFIDQF 317
           +  S+F+  FM SF+D F
Sbjct: 212 RSISVFSFFFMPSFVDIF 229


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 305 ISWTKLVDKRFHENGIKNGVLFSSDLHVTGDLVMAKADIY 424
           ISW   + ++F  N      LF    HV+ ++V   A  Y
Sbjct: 309 ISWCYKLQEQFVTNSEVRTELFKLAQHVSANIVHITAGNY 348


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 305 ISWTKLVDKRFHENGIKNGVLFSSDLHVTGDLVMAKADIY 424
           ISW   + ++F  N      LF    HV+ ++V   A  Y
Sbjct: 309 ISWCYKLQEQFVTNSEVRTELFKLAQHVSANIVHITAGNY 348


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/38 (28%), Positives = 14/38 (36%)
 Frame = -3

Query: 339  WNLLSTSLVQLIPVTMTFLNKKDSCCSGTRWRHCLCKS 226
            W   +T+     P T       D C SG  + H  C S
Sbjct: 1183 WQTKTTTSTTTRPTTTVSQLIDDKCDSGQYYPHESCSS 1220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,870
Number of Sequences: 336
Number of extensions: 3331
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)