Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20903
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   6.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   6.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 582  LPVKSAFTNDLVHQNFEDD 526
            +P K  F N  V++ FE+D
Sbjct: 1514 IPAKDVFENGHVNKAFEED 1532


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 582  LPVKSAFTNDLVHQNFEDD 526
            +P K  F N  V++ FE+D
Sbjct: 1514 IPAKDVFENGHVNKAFEED 1532


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 582  LPVKSAFTNDLVHQNFEDD 526
            +P K  F N  V++ FE+D
Sbjct: 1514 IPAKDVFENGHVNKAFEED 1532


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 582  LPVKSAFTNDLVHQNFEDD 526
            +P K  F N  V++ FE+D
Sbjct: 1514 IPAKDVFENGHVNKAFEED 1532


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 336 HDRSRRDVHLLTRHRCHNIRR 274
           H R  RD HL T  R H   R
Sbjct: 16  HKRFTRDHHLKTHMRLHTGER 36


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 336 HDRSRRDVHLLTRHRCHNIRR 274
           H R  RD HL T  R H   R
Sbjct: 169 HKRFTRDHHLKTHMRLHTGER 189



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 628 CFFNIISRYLLPQRVVAGEIC 566
           CF  +I   + P+ + AG+ C
Sbjct: 350 CFVQLIGMRVPPEMMQAGDYC 370


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 65  PYGRHRSLTLDSVHLFCNRLL 3
           P GR     L S+H F N ++
Sbjct: 229 PQGRKEQKVLKSLHSFSNNVI 249


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 516 SHKCGIPMHWC 484
           S+KCGI  H C
Sbjct: 151 SYKCGIQYHIC 161


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 516 SHKCGIPMHWC 484
           S+KCGI  H C
Sbjct: 147 SYKCGIQYHIC 157


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 65  PYGRHRSLTLDSVHLFCNRLL 3
           P GR     L S+H F N ++
Sbjct: 229 PQGRKEQKVLKSLHSFSNNVI 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,688
Number of Sequences: 336
Number of extensions: 2100
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)