Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20891
         (572 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_57953| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.031
SB_21007| Best HMM Match : Insulin (HMM E-Value=1.6)                   29   2.7  
SB_25625| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_49906| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.2  
SB_55795| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-08)                 27   8.2  

>SB_57953| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 712

 Score = 35.5 bits (78), Expect = 0.031
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +1

Query: 328 LNEELSYCRGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIWACVPMLCS 489
           L +E++Y   LG+P++M+ +      NLA  +      SH   L W  VPM CS
Sbjct: 118 LMQEVNYAIHLGLPSVMLELGNYNIINLAHYVNDILINSHVQQL-WIKVPMRCS 170


>SB_21007| Best HMM Match : Insulin (HMM E-Value=1.6)
          Length = 106

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = +1

Query: 355 GLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIWACVPMLCSRTYRECMKMMKKRKL 534
           GL + + ++S H +  +   R    Y E SH P   + C   +       C    K+RK 
Sbjct: 13  GLTLASCLLSTHAQCGSRGCR---KYTEASHAPIAGYLCGDHIMDVFMAVCWNTRKRRKR 69

Query: 535 GMSPGTGG 558
           G+   TGG
Sbjct: 70  GIPNTTGG 77


>SB_25625| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 112

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/52 (23%), Positives = 30/52 (57%)
 Frame = +2

Query: 35  IKKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNA 190
           +K    +  +  + +++TADL++ LTE+   S++++++  + P      T+A
Sbjct: 41  LKSALTESHTDSFTWLLTADLKSALTESHTDSFTWLLTADLKPALTESHTDA 92


>SB_49906| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 47

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +2

Query: 50  QQEISCGYEYIITADLQTCLTEALQCSYSFIVSP 151
           QQ+I+ GYE +  A L +C T+ +Q +   ++ P
Sbjct: 8   QQQITTGYESVAFAILSSCRTQFMQITDRILLYP 41


>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2578

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 433  NKFGVFWLNCCSLSRVLIS 377
            N FGV W N C++  +++S
Sbjct: 1773 NPFGVVWTNACAIEPIIVS 1791


>SB_55795| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-08)
          Length = 363

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 202 TIFTGICGLPTKTWVNNGRNYK*ITALKCFC 110
           T  +  C +PT  ++N+ RN +    L C+C
Sbjct: 213 TFLSYFCFVPTAVFINDFRNTEAYVVLACYC 243


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,556,433
Number of Sequences: 59808
Number of extensions: 387167
Number of successful extensions: 809
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)