Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20891
         (572 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    27   0.43 
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   9.3  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.3  

>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 27.1 bits (57), Expect = 0.43
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
 Frame = +2

Query: 44  MAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNA-GKNGGFTRSD 220
           M   E++        A  +T  T    C Y     P I  R RR+   A  +NGG    D
Sbjct: 297 MTMNELAAQVFIFFLAGFETSSTTMNFCLYELAKHPDIQERLRREIERAVEENGGELTYD 356

Query: 221 MVLSPQ 238
           +V+  +
Sbjct: 357 VVMGTE 362


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +1

Query: 283 VDSPSATVRQRHED-YLN 333
           VD+PS T+ +RH+  Y N
Sbjct: 582 VDNPSNTINERHDQRYAN 599


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 545 GLIPSFLFFIIFMHSLYVLLH 483
           G+I S  F I+F+   Y+LL+
Sbjct: 688 GIIASIYFIILFICGNYILLN 708


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,942
Number of Sequences: 2352
Number of extensions: 13436
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)