Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20891
         (572 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ002740-1|CAA05712.1|  609|Drosophila melanogaster capsuleen pr...    35   0.090
AY122153-1|AAM52665.1|  610|Drosophila melanogaster LD07634p pro...    32   0.48 
AF167574-1|AAF04504.1|  610|Drosophila melanogaster putative pro...    32   0.48 
AE013599-2233|AAF58030.1|  605|Drosophila melanogaster CG3730-PB...    32   0.48 
AE013599-2232|AAM68510.1|  610|Drosophila melanogaster CG3730-PA...    32   0.48 
AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa cent...    32   0.63 
AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-P...    32   0.63 

>AJ002740-1|CAA05712.1|  609|Drosophila melanogaster capsuleen
           protein.
          Length = 609

 Score = 34.7 bits (76), Expect = 0.090
 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = +1

Query: 277 INVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRESNNLARIL 423
           +NVDSP+A +R+  ++    ++++   L  V  +M+ + G E+ NLA I+
Sbjct: 71  VNVDSPNAKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPENENLASIV 120


>AY122153-1|AAM52665.1|  610|Drosophila melanogaster LD07634p
           protein.
          Length = 610

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +1

Query: 277 INVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRESNNLARIL 423
           +NVDSP+  +R+  ++    ++++   L  V  +M+ + G E+ NLA I+
Sbjct: 71  VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPENENLASIV 120


>AF167574-1|AAF04504.1|  610|Drosophila melanogaster putative
           protein methyltransferaseJBP1 protein.
          Length = 610

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +1

Query: 277 INVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRESNNLARIL 423
           +NVDSP+  +R+  ++    ++++   L  V  +M+ + G E+ NLA I+
Sbjct: 71  VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPENENLASIV 120


>AE013599-2233|AAF58030.1|  605|Drosophila melanogaster CG3730-PB,
           isoform B protein.
          Length = 605

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +1

Query: 277 INVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRESNNLARIL 423
           +NVDSP+  +R+  ++    ++++   L  V  +M+ + G E+ NLA I+
Sbjct: 71  VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPENENLASIV 120


>AE013599-2232|AAM68510.1|  610|Drosophila melanogaster CG3730-PA,
           isoform A protein.
          Length = 610

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +1

Query: 277 INVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRESNNLARIL 423
           +NVDSP+  +R+  ++    ++++   L  V  +M+ + G E+ NLA I+
Sbjct: 71  VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPENENLASIV 120


>AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa
           centrosomal protein protein.
          Length = 2726

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +1

Query: 304 VRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNL 411
           V+++ +DYLN++++ CR LG   + I+    ES  L
Sbjct: 665 VQRKFDDYLNQQITLCRDLGAQELKIARDQWESEKL 700


>AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-PB,
           isoform B protein.
          Length = 2897

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +1

Query: 304 VRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNL 411
           V+++ +DYLN++++ CR LG   + I+    ES  L
Sbjct: 836 VQRKFDDYLNQQITLCRDLGAQELKIARDQWESEKL 871


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,183,691
Number of Sequences: 53049
Number of extensions: 573928
Number of successful extensions: 1342
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)