Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20887
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 129 2e-30
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 1.2
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.2
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.2
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.2
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical p... 29 3.6
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 29 3.6
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.6
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 3.6
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.6
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 3.6
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 29 3.6
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 8.4
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 129 bits (311), Expect = 2e-30
Identities = 57/89 (64%), Positives = 71/89 (79%)
Frame = +1
Query: 241 PR*CVVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 420
P VV+S+RP+ QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPRLL++ DP D
Sbjct: 71 PADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRID 130
Query: 421 HQPITEASYVNIPVIALCNTDSPLRFVDI 507
HQ +TEASYV +PVI+ NT+SPL+ +DI
Sbjct: 131 HQAVTEASYVGVPVISFVNTESPLKLIDI 159
Score = 103 bits (247), Expect = 1e-22
Identities = 46/73 (63%), Positives = 57/73 (78%)
Frame = +2
Query: 32 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTRVINLRRAWEKLVL 211
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG +IN+++ WEKL+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 212 AARAVVAIENPAD 250
AARA+ A+ENPAD
Sbjct: 61 AARAIAAVENPAD 73
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Frame = +3
Query: 468 FVQHRLPTKICGHCIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRW-----DVVVDL 632
FV P K+ +PCN K SIGLMWW+LARE+L LRG + R + +++ DL
Sbjct: 147 FVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDL 206
Query: 633 FFYRDPEESEKDEQQA 680
+FYRDP E+EK+E A
Sbjct: 207 YFYRDPTETEKEETGA 222
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 277 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 438
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 277 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 438
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 277 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 438
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 277 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 438
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 277 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 438
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 277 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 438
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 277 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 438
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 277 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 438
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 277 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 438
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 277 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 438
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 277 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 438
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 277 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 438
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 277 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 438
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +3
Query: 252 CRHLITALRSACCTEVCRAHR-CYAYCG 332
CR T R+ CCT C R C CG
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical
protein F49A5.7 protein.
Length = 411
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = -3
Query: 597 EAHHEASTLHVPTTTTSNQ*SGKTWCCMGYN-VHKS*WGVCVAQSNHRNVDI*SFSNGLM 421
E ++T+ TTTT+ S C G+N ++ W + + N D G
Sbjct: 123 ETSTASTTIRPLTTTTTPAPSNNVGCTFGFNYINGKCWRLVTSLQTRDNADFDCMREGGS 182
Query: 420 VLCRVQYNQETRFTECSLNLVSKS 349
L ++ QE T L+ VS S
Sbjct: 183 TLFSIRNEQENNAT---LDFVSNS 203
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 338 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 490
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3338 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 338 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 490
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 338 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 490
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +3
Query: 252 CRHLITALRSACCTEVCRAHR-CYAYCG 332
CR T R+ CCT C R C CG
Sbjct: 95 CRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +3
Query: 252 CRHLITALRSACCTEVCRAHR-CYAYCG 332
CR T R+ CCT C R C CG
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +3
Query: 252 CRHLITALRSACCTEVCRAHR-CYAYCG 332
CR T R+ CCT C R C CG
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +3
Query: 252 CRHLITALRSACCTEVCRAHR-CYAYCG 332
CR T R+ CCT C R C CG
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 338 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 490
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 522 TKSSHSIGLMWWLLA 566
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,790,568
Number of Sequences: 27780
Number of extensions: 443418
Number of successful extensions: 1296
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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