Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20886
         (473 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   2.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   2.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   2.5  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   3.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   4.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   5.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   5.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   7.7  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 302 CSTSWPLARTRPYHKTYTVN 243
           CST    + T+PY+K  T N
Sbjct: 434 CSTPTENSPTKPYYKLKTAN 453


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 62  VLFKCVKGNVGSTIDNFTS 6
           V+F C +G+V    DNF++
Sbjct: 73  VIFYCQEGSVDFLFDNFSA 91


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 62  VLFKCVKGNVGSTIDNFTS 6
           V+F C +G+V    DNF++
Sbjct: 306 VIFYCQEGSVDFLFDNFSA 324


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 62  VLFKCVKGNVGSTIDNFTS 6
           V+F C +G+V    DNF++
Sbjct: 306 VIFYCQEGSVDFLFDNFSA 324


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 470 IRIWFQQHLY 441
           ++IWFQ H Y
Sbjct: 84  VKIWFQNHRY 93


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 243 IYGIGFMIRTSACEWPRS 296
           I G+ +  RT +C+WP +
Sbjct: 129 IGGLLYNERTHSCDWPEN 146


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 5/20 (25%), Positives = 15/20 (75%)
 Frame = -1

Query: 305 MCSTSWPLARTRPYHKTYTV 246
           +C+ ++ +  ++P+ +T+TV
Sbjct: 351 LCNKNFVIEASKPHERTFTV 370


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 447 PLLELKSSCALLNMLKI 397
           P+ ELKS  +LLN ++I
Sbjct: 61  PIQELKSQESLLNSIQI 77


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 243 CGTWRYDIVKTA 208
           CG  +YDI++TA
Sbjct: 424 CGRDKYDILRTA 435


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,512
Number of Sequences: 336
Number of extensions: 2241
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)