Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20884
(785 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 26 0.30
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 24 1.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 24 1.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 24 1.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 24 1.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 24 1.6
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 24 1.6
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 24 1.6
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 24 1.6
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 24 1.6
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 4.8
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 4.8
AF264718-1|AAF75271.1| 125|Tribolium castaneum putative cytochr... 21 8.4
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 26.2 bits (55), Expect = 0.30
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 454 FVLFWVAWLCMLAGAIAVMYAL 519
F L WV ++ ++AG + V+Y L
Sbjct: 28 FTLLWVLFVIIVAGNVGVLYTL 49
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 452 CSCCSGWPGCACS 490
C+C +GW G CS
Sbjct: 130 CNCKNGWKGKTCS 142
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 5/26 (19%)
Frame = +2
Query: 428 SG*TCVGR-----CSCCSGWPGCACS 490
+G TCV + C C GW G C+
Sbjct: 79 NGGTCVDKINAFQCICKEGWEGALCN 104
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 301 CPHGL*FWPRLPSSIVLLGAVGRYLLL 221
C H FW +P I LL YLLL
Sbjct: 1020 CLHPQEFWCIVPGIIYLLSIPSMYLLL 1046
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 301 CPHGL*FWPRLPSSIVLLGAVGRYLLL 221
C H FW +P I LL YLLL
Sbjct: 1020 CLHPQEFWCIVPGIIYLLSIPSMYLLL 1046
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 301 CPHGL*FWPRLPSSIVLLGAVGRYLLL 221
C H FW +P I LL YLLL
Sbjct: 1020 CLHPQEFWCIVPGIIYLLSIPSMYLLL 1046
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 301 CPHGL*FWPRLPSSIVLLGAVGRYLLL 221
C H FW +P I LL YLLL
Sbjct: 1020 CLHPQEFWCIVPGIIYLLSIPSMYLLL 1046
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -3
Query: 492 GEHAQPGHPEQHEQRPTQVH 433
G H Q HP+ H+ Q H
Sbjct: 168 GHHMQEQHPQHHQPHHQQQH 187
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 23.8 bits (49), Expect = 1.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 775 SSGSINNHSYSDLLNFVEQNFEFVQCVTFVEHS 677
S+GS+N S D +NF E+N +T EHS
Sbjct: 448 SNGSLNQISDIDDVNFQEENL----ALTSTEHS 476
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 23.8 bits (49), Expect = 1.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 775 SSGSINNHSYSDLLNFVEQNFEFVQCVTFVEHS 677
S+GS+N S D +NF E+N +T EHS
Sbjct: 273 SNGSLNQISDIDDVNFQEENL----ALTSTEHS 301
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -3
Query: 492 GEHAQPGHPEQHEQRPTQVH 433
G H Q HP+ H+ Q H
Sbjct: 170 GHHMQEQHPQHHQPHHQQQH 189
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 535 PNPGHGTNSVLWSDWSWSMPSNHK 606
P GH +SV+W +P N K
Sbjct: 533 PFAGHPVDSVVWERDGRQLPINRK 556
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 22.2 bits (45), Expect = 4.8
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 521 GSAYMTAIAPASMHSQATQNNTNSDQRKFTQKGS-SAYFSTSS 396
GS + +PAS T +TN D++ G+ S+ F + S
Sbjct: 928 GSPCRNSASPASSDRSGTPRSTNGDRKPGGSLGALSSMFDSLS 970
>AF264718-1|AAF75271.1| 125|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q6 protein.
Length = 125
Score = 21.4 bits (43), Expect = 8.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 226 EDICRRRRGELLKKEDEAKIITRVDMSDAKY 318
+DI + R E+L + KI T D+ + KY
Sbjct: 16 QDIQTKVREEILSVVGKEKIPTYNDLQELKY 46
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,287
Number of Sequences: 336
Number of extensions: 4131
Number of successful extensions: 26
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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