Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20884
(785 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071357-1|AAL48979.1| 565|Drosophila melanogaster RE39378p pro... 103 3e-22
AE014297-677|AAF54170.1| 565|Drosophila melanogaster CG2791-PA ... 103 3e-22
BT003171-1|AAO24926.1| 443|Drosophila melanogaster SD07604p pro... 32 0.77
BT001477-1|AAN71232.1| 443|Drosophila melanogaster LD21345p pro... 32 0.77
AL023893-1|CAA19655.1| 485|Drosophila melanogaster EG:132E8.1 p... 32 0.77
AE014298-190|AAS65244.1| 443|Drosophila melanogaster CG3056-PB,... 32 0.77
AE014298-189|AAF45613.1| 485|Drosophila melanogaster CG3056-PA,... 32 0.77
AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-P... 32 1.0
AY113581-1|AAM29586.1| 133|Drosophila melanogaster RH32180p pro... 31 2.4
AE014297-2905|AAF55831.1| 133|Drosophila melanogaster CG5697-PA... 31 2.4
AY061545-1|AAL29093.2| 356|Drosophila melanogaster LP05492p pro... 29 5.4
AE014296-2715|AAF49478.1| 341|Drosophila melanogaster CG4818-PA... 29 5.4
>AY071357-1|AAL48979.1| 565|Drosophila melanogaster RE39378p
protein.
Length = 565
Score = 103 bits (247), Expect = 3e-22
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Frame = +1
Query: 274 EAKIITRVDMSDAKYVVGDHRNGDAKIEL---DANKRQFTGMTREEVLKYADDPFWVNLR 444
E K+ R D + K++ GDH+NGDAKI++ + K FTGM++EE++KYA+DPFWV LR
Sbjct: 24 EDKLAERRD--EVKFIKGDHQNGDAKIDIGTVNGGKPAFTGMSKEELMKYANDPFWVRLR 81
Query: 445 WSLFVLFWVAWLCMLAGAIAVMYALPSAARPNP 543
W FV FW W+ ML GAI ++ P A P P
Sbjct: 82 WIFFVCFWAIWVGMLVGAILIIIGAPKCAAPQP 114
Score = 33.1 bits (72), Expect = 0.44
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 510 VRAPKCGPPEPRTWYELGPLVGLELVDAVEP 602
+ APKC P+P WY+ GP V+ P
Sbjct: 104 IGAPKCAAPQPLPWYKRGPHAKFASVETCRP 134
>AE014297-677|AAF54170.1| 565|Drosophila melanogaster CG2791-PA
protein.
Length = 565
Score = 103 bits (247), Expect = 3e-22
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Frame = +1
Query: 274 EAKIITRVDMSDAKYVVGDHRNGDAKIEL---DANKRQFTGMTREEVLKYADDPFWVNLR 444
E K+ R D + K++ GDH+NGDAKI++ + K FTGM++EE++KYA+DPFWV LR
Sbjct: 24 EDKLAERRD--EVKFIKGDHQNGDAKIDIGTVNGGKPAFTGMSKEELMKYANDPFWVRLR 81
Query: 445 WSLFVLFWVAWLCMLAGAIAVMYALPSAARPNP 543
W FV FW W+ ML GAI ++ P A P P
Sbjct: 82 WIFFVCFWAIWVGMLVGAILIIIGAPKCAAPQP 114
Score = 33.1 bits (72), Expect = 0.44
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 510 VRAPKCGPPEPRTWYELGPLVGLELVDAVEP 602
+ APKC P+P WY+ GP V+ P
Sbjct: 104 IGAPKCAAPQPLPWYKRGPHAKFASVETCRP 134
>BT003171-1|AAO24926.1| 443|Drosophila melanogaster SD07604p
protein.
Length = 443
Score = 32.3 bits (70), Expect = 0.77
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 510 HDCNSPGEHAQPGHPEQHEQRPTQVH 433
H+ + P H QP HP QH Q Q+H
Sbjct: 307 HNPHMPPHHHQPQHPHQHPQHHPQLH 332
>BT001477-1|AAN71232.1| 443|Drosophila melanogaster LD21345p
protein.
Length = 443
Score = 32.3 bits (70), Expect = 0.77
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 510 HDCNSPGEHAQPGHPEQHEQRPTQVH 433
H+ + P H QP HP QH Q Q+H
Sbjct: 307 HNPHMPPHHHQPQHPHQHPQHHPQLH 332
>AL023893-1|CAA19655.1| 485|Drosophila melanogaster EG:132E8.1
protein.
Length = 485
Score = 32.3 bits (70), Expect = 0.77
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 510 HDCNSPGEHAQPGHPEQHEQRPTQVH 433
H+ + P H QP HP QH Q Q+H
Sbjct: 307 HNPHMPPHHHQPQHPHQHPQHHPQLH 332
>AE014298-190|AAS65244.1| 443|Drosophila melanogaster CG3056-PB,
isoform B protein.
Length = 443
Score = 32.3 bits (70), Expect = 0.77
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 510 HDCNSPGEHAQPGHPEQHEQRPTQVH 433
H+ + P H QP HP QH Q Q+H
Sbjct: 307 HNPHMPPHHHQPQHPHQHPQHHPQLH 332
>AE014298-189|AAF45613.1| 485|Drosophila melanogaster CG3056-PA,
isoform A protein.
Length = 485
Score = 32.3 bits (70), Expect = 0.77
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 510 HDCNSPGEHAQPGHPEQHEQRPTQVH 433
H+ + P H QP HP QH Q Q+H
Sbjct: 307 HNPHMPPHHHQPQHPHQHPQHHPQLH 332
>AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-PA
protein.
Length = 2294
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 489 EHAQPGHPEQHEQRPTQVHPERIVSIL-QYLLSRHPSELP 373
+ Q HP+ +Q+ Q HP++I L Q L +HP ++P
Sbjct: 404 QQEQQPHPQPLQQQLAQQHPQQIAQQLPQQLSQQHPQQIP 443
>AY113581-1|AAM29586.1| 133|Drosophila melanogaster RH32180p
protein.
Length = 133
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 385 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVMYALPSAARPNPGHGTNS 561
G+T EE+L +A DP+W +R L + +L L + + Y+ S PN N+
Sbjct: 52 GLTLEELLPFALDPWWQAVRRLSCGLLGLTFLLTLIAGLVMAYS-DSVCLPNRAISRNA 109
>AE014297-2905|AAF55831.1| 133|Drosophila melanogaster CG5697-PA
protein.
Length = 133
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 385 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVMYALPSAARPNPGHGTNS 561
G+T EE+L +A DP+W +R L + +L L + + Y+ S PN N+
Sbjct: 52 GLTLEELLPFALDPWWQAVRRLSCGLLGLTFLLTLIAGLVMAYS-DSVCLPNRAISRNA 109
>AY061545-1|AAL29093.2| 356|Drosophila melanogaster LP05492p
protein.
Length = 356
Score = 29.5 bits (63), Expect = 5.4
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 489 EHAQPGHPEQHEQRPTQVHPERIVSILQYLLSRHPSELP-FISIEFNLRVTIPVVPDDIF 313
E + HP+ H P + H E V++ Q+ + HP E+P ++ + R P VP I
Sbjct: 214 ETGRSAHPDGHH--PVE-HHEHPVAVAQHPVGNHPVEVPHHHTVVESGRSAHPEVPHSIE 270
Query: 312 RIGHVHTGYD 283
H +G D
Sbjct: 271 HHEHPVSGSD 280
>AE014296-2715|AAF49478.1| 341|Drosophila melanogaster CG4818-PA
protein.
Length = 341
Score = 29.5 bits (63), Expect = 5.4
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 489 EHAQPGHPEQHEQRPTQVHPERIVSILQYLLSRHPSELP-FISIEFNLRVTIPVVPDDIF 313
E + HP+ H P + H E V++ Q+ + HP E+P ++ + R P VP I
Sbjct: 199 ETGRSAHPDGHH--PVE-HHEHPVAVAQHPVGNHPVEVPHHHTVVESGRSAHPEVPHSIE 255
Query: 312 RIGHVHTGYD 283
H +G D
Sbjct: 256 HHEHPVSGSD 265
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,814,883
Number of Sequences: 53049
Number of extensions: 793160
Number of successful extensions: 3352
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3343
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -