Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20882
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.6  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    21   8.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.0  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 282 WNSLFGYQ 259
           WN LFGYQ
Sbjct: 629 WNKLFGYQ 636


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 160 VFRTQHEVTAEGFVLDIPSSFQEFHLFLFLNL 255
           V    +++   G  LDIP+S  + HL L + L
Sbjct: 32  VHEVDNQLKQMGCDLDIPNSVVQKHLILLMVL 63


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -2

Query: 516 SQIWGNAKSM*SKTCLTGSSRSTLGAFRLSNYWSPFSPDL 397
           +QI G    +  K C    SR    A R++ Y     PD+
Sbjct: 50  NQIKGALPEIIGKNCERCDSRQVANARRIARYVQTKHPDV 89


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 624  HGAPAILQKLDWIT*RVYVLAG 689
            +  PA+ Q LDWI    Y   G
Sbjct: 2496 YDVPALSQYLDWIAVMTYDFHG 2517



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 400  SSQWVAIPIRWKIRRSTALAKA 335
            S+QWV+     +IRR + L KA
Sbjct: 2631 SNQWVSYDDIAEIRRKSRLVKA 2652


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,495
Number of Sequences: 336
Number of extensions: 3868
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)