Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20881
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   6.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   6.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.3  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 614 FPVTSAGMLWLICSSTV 664
           F V   G +WL+ SSTV
Sbjct: 489 FLVNDFGFIWLVLSSTV 505


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 540 VAWDSNVHKSYGESVLHKAITG 475
           V  D N+HKSY + ++   I G
Sbjct: 10  VPGDKNLHKSYSKMLILAQIFG 31


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 540 VAWDSNVHKSYGESVLHKAITG 475
           V  D N+HKSY + ++   I G
Sbjct: 10  VPGDKNLHKSYSKMLILAQIFG 31


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 530  IAMSTNLMGSLCCTKQSQE 474
            I  ST L  +LCCTK+ +E
Sbjct: 1356 ILASTEL--NLCCTKKKEE 1372


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 530  IAMSTNLMGSLCCTKQSQE 474
            I  ST L  +LCCTK+ +E
Sbjct: 1356 ILASTEL--NLCCTKKKEE 1372


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 530  IAMSTNLMGSLCCTKQSQE 474
            I  ST L  +LCCTK+ +E
Sbjct: 1356 ILASTEL--NLCCTKKKEE 1372


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 530  IAMSTNLMGSLCCTKQSQE 474
            I  ST L  +LCCTK+ +E
Sbjct: 1356 ILASTEL--NLCCTKKKEE 1372


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 487 SNHRNVDI*SFSNGLMVLCRVQYNQETRFT 398
           S  RN++  SF   L++LC +       FT
Sbjct: 268 SKSRNIEGVSFGTNLVILCALWITTLLLFT 297


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 248 YDSTSSQNKFFPG 210
           +DS S QN  FPG
Sbjct: 740 FDSRSRQNSSFPG 752


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,731
Number of Sequences: 336
Number of extensions: 4881
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)