Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20880
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    34   0.005
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    25   3.3  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    24   5.8  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    24   5.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   5.8  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    24   5.8  
AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.            23   7.6  
AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.            23   7.6  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   7.6  
AF203333-1|AAF19828.1|  119|Anopheles gambiae immune-responsive ...    23   7.6  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 33.9 bits (74), Expect = 0.005
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 31   RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTI 153
            R + +LRV K    WPTLN+    + RTMG L  +  +  I
Sbjct: 899  RSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCI 939


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 347 CLIGCWPCACIPYC 388
           CL  C P  C+P+C
Sbjct: 150 CLSKCSPTKCVPFC 163


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 338 LILCLIGCWPCACI 379
           L+LCL+  W C C+
Sbjct: 250 LVLCLLVPWTCICL 263


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 338 LILCLIGCWPCACI 379
           L+LCL+  W C C+
Sbjct: 250 LVLCLLVPWTCICL 263


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 356 GCWPCACIPYCMESCQNATHY 418
           GC PC C  + +E C +A+ Y
Sbjct: 493 GCTPCFCYGHTLE-CTSASGY 512


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
 Frame = +3

Query: 606 IVVKNILFMFCYIYNKL--FCDKFSN-TGMSYY 695
           +V+ + +F+FCY+ N++    DKF+   G S Y
Sbjct: 326 LVMTSQVFIFCYVGNEISYTTDKFTEFVGFSNY 358


>AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 194 RRGSSTIRDGCASATNGP 247
           +    T RDG AS+ NGP
Sbjct: 94  KANDQTARDGSASSKNGP 111


>AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 194 RRGSSTIRDGCASATNGP 247
           +    T RDG AS+ NGP
Sbjct: 94  KANDQTARDGSASSKNGP 111


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 21/82 (25%), Positives = 30/82 (36%)
 Frame = -3

Query: 478 AFITNSSICIGSNVGVAIRTVMSSILTAFHAVRDASTWPTSYQTKD*RKKMSLARSIVLN 299
           A ++NSS+  GSN G A  T  +            +    S    +     S    +  N
Sbjct: 122 AALSNSSVLNGSNSGSATTTTTT-------PTNPGNGNGGSNNNNNSNSSSSCNNHVSSN 174

Query: 298 PSYDGRMTGGAG*TCGSGPIGC 233
            + +G   GG   T G G  GC
Sbjct: 175 TNNNGTTNGGGELTTGGGTNGC 196


>AF203333-1|AAF19828.1|  119|Anopheles gambiae immune-responsive
           alpha-macroglobulinand complement C3-related protein
           IMCR14 protein.
          Length = 119

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 194 RRGSSTIRDGCASATNGP 247
           +    T RDG AS+ NGP
Sbjct: 23  KANDQTARDGSASSKNGP 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 784,259
Number of Sequences: 2352
Number of extensions: 16025
Number of successful extensions: 74
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)