Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20876
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    29   0.030
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    26   0.28 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   1.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.0  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 0.030
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +3

Query: 507 RVGAYFVEWGVYPR---KFPVDRVPVPNLTHLLYGFIPICGGD 626
           R+  YF  W +Y     ++  + +PV   TH++Y FI +   D
Sbjct: 23  RIVCYFSNWAIYRPGIGRYAQEDLPVDLCTHIVYSFIGVNDAD 65


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +1

Query: 310 GSATSAAFK-VKKGGRYQMQVELCNSDGCSSSEGVE 414
           G  T++ F+ VK G  Y +    C+S GCS     E
Sbjct: 327 GDKTNSVFEHVKLGSLYHISFMACSSAGCSQKVAEE 362


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = +3

Query: 507 RVGAYFVEWGVYPR---KFPVDRVPVPNLTHLLYGFIPICGGDGINDSLKEIEGSFQALQ 677
           +V  Y   W  Y     KF V+ +     THL+Y F+    G G +  +K +E +    Q
Sbjct: 21  KVVCYHGIWSTYRLNNGKFTVEDIDPTLCTHLIYSFV----GLGDDSRIKHLEPNLDVNQ 76


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +3

Query: 507 RVGAYFVEWGVYP---RKFPVDRVPVPNLTHLLYGFI 608
           +V  Y+  W  Y     +F VD +     TH++Y F+
Sbjct: 25  KVVCYWGTWSTYRWGNGRFTVDHIDPYLCTHIIYSFV 61


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 579 NLTHLLYGFIPICGGDGINDSLKEI 653
           N+T  +YGF       GI  S KEI
Sbjct: 259 NITVAVYGFTSEIVDHGIRFSFKEI 283


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 579 NLTHLLYGFIPICGGDGINDSLKEI 653
           N+T  +YGF       GI  S KEI
Sbjct: 259 NITVAVYGFTSEIVDHGIRFSFKEI 283


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 579 NLTHLLYGFIPICGGDGINDSLKEI 653
           N+T  +YGF       GI  S KEI
Sbjct: 259 NITVAVYGFTSEIVDHGIRFSFKEI 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,806
Number of Sequences: 336
Number of extensions: 3635
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)