Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20874
(751 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 160 8e-40
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 157 6e-39
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 156 2e-38
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 65 4e-11
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 63 2e-10
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 60 1e-09
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 60 2e-09
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 60 2e-09
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 59 4e-09
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 56 3e-08
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 54 1e-07
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 54 1e-07
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 54 1e-07
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 54 1e-07
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 53 2e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 52 3e-07
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 52 3e-07
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 52 5e-07
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 51 7e-07
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 51 7e-07
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 51 7e-07
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 51 7e-07
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 51 9e-07
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 51 9e-07
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 50 1e-06
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 50 2e-06
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 50 2e-06
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 50 2e-06
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 50 2e-06
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 50 2e-06
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 50 2e-06
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 49 3e-06
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 49 3e-06
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 49 4e-06
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 48 9e-06
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 48 9e-06
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 48 9e-06
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 48 9e-06
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 48 9e-06
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 47 1e-05
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 46 2e-05
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 46 2e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 46 2e-05
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 46 3e-05
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 46 3e-05
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 46 3e-05
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 46 3e-05
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 46 4e-05
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 45 5e-05
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 45 5e-05
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 45 5e-05
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 45 5e-05
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 45 5e-05
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 45 6e-05
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 45 6e-05
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 44 8e-05
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 44 1e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 44 1e-04
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 44 1e-04
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 44 1e-04
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 44 1e-04
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 44 1e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 43 3e-04
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 43 3e-04
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 42 3e-04
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 42 3e-04
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 42 3e-04
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 42 4e-04
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 42 4e-04
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 42 4e-04
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 42 4e-04
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 42 4e-04
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 42 4e-04
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 42 4e-04
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 42 4e-04
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 42 4e-04
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 42 4e-04
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 42 4e-04
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 42 4e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 42 6e-04
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 42 6e-04
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 42 6e-04
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 42 6e-04
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 41 8e-04
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 41 8e-04
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 41 0.001
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 41 0.001
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 41 0.001
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 40 0.001
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 40 0.002
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 40 0.002
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 40 0.002
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 40 0.002
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 40 0.002
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 40 0.002
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 40 0.002
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 40 0.002
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 40 0.002
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 39 0.003
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 39 0.003
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 39 0.003
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 39 0.004
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 39 0.004
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 38 0.005
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 38 0.005
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 38 0.007
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 38 0.007
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 38 0.007
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 38 0.007
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 38 0.007
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 38 0.007
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 38 0.009
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 38 0.009
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 38 0.009
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 37 0.012
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 37 0.012
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 37 0.012
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 37 0.016
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 37 0.016
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 37 0.016
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 37 0.016
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 36 0.022
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 36 0.022
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 36 0.022
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 36 0.029
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 36 0.029
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.029
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 36 0.029
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 36 0.029
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 36 0.038
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 36 0.038
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 36 0.038
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 36 0.038
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 36 0.038
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 36 0.038
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 35 0.050
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 35 0.066
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 35 0.066
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 35 0.066
At3g59850.1 68416.m06679 polygalacturonase, putative / pectinase... 35 0.066
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 35 0.066
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 35 0.066
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 35 0.066
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 34 0.088
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 34 0.088
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.088
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.088
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.088
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 34 0.088
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 34 0.088
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 34 0.088
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 34 0.12
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 34 0.12
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 33 0.15
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 33 0.15
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 33 0.15
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 33 0.15
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 33 0.20
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 33 0.20
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 33 0.20
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.20
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.20
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 33 0.27
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 33 0.27
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 33 0.27
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 33 0.27
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 33 0.27
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 33 0.27
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 32 0.35
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 32 0.47
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.47
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 31 0.62
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 31 0.62
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 31 0.62
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 31 0.62
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 31 0.82
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 31 0.82
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 31 0.82
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 31 0.82
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 31 0.82
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 31 0.82
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 31 1.1
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 31 1.1
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 30 1.4
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 30 1.4
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 30 1.4
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 30 1.4
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 1.4
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 30 1.4
At1g26580.1 68414.m03238 expressed protein similar to putative M... 30 1.9
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 30 1.9
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 29 2.5
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 29 2.5
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 29 2.5
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 29 2.5
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 29 2.5
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 29 3.3
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 29 3.3
At2g36370.1 68415.m04463 F-box family protein (FBL11) contains s... 29 3.3
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 29 4.4
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 29 4.4
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 29 4.4
At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR ... 29 4.4
At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR ... 29 4.4
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 29 4.4
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 28 5.8
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 28 5.8
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 28 5.8
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 28 7.6
At5g38560.1 68418.m04662 protein kinase family protein contains ... 28 7.6
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 28 7.6
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 28 7.6
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 28 7.6
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 28 7.6
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 160 bits (389), Expect = 8e-40
Identities = 85/167 (50%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Frame = +3
Query: 255 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 434
ALSGSWD LRLWDLAAG +TRRF HTKDVLSVAFS+DNRQIVS SRD+TIKLWNTL E
Sbjct: 78 ALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE 137
Query: 435 CKYTIQD--DGHSDWVSCVRFSPNHANPLSYPVVGTELSRSGISLTVSSRXXXXXXXXXX 608
CKYTI + +GH DWVSCVRFSPN P + + R
Sbjct: 138 CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYV 197
Query: 609 XXXXXXXXXXCVHLVVRT*RAMLWDLNDGKHLHTLDHNDIITALCFS 749
+ +LWDL +GK L++L+ N +I ALCFS
Sbjct: 198 STVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFS 244
Score = 97.9 bits (233), Expect = 6e-21
Identities = 44/75 (58%), Positives = 58/75 (77%)
Frame = +1
Query: 25 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 204
M+E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT 60
Query: 205 GHSHFISDVVLSSDG 249
GHSHF+ DVVLSSDG
Sbjct: 61 GHSHFVEDVVLSSDG 75
Score = 89.0 bits (211), Expect = 3e-18
Identities = 37/52 (71%), Positives = 44/52 (84%)
Frame = +2
Query: 506 QPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
QP IVS WD+TVKVW+L+NCKL+ GH+GY++TV VSPDGSLCASGGKD
Sbjct: 164 QPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD 215
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+S SWDKT+++W+L+ K HT V +VA S D SG +D + LW+ LAE
Sbjct: 168 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD-LAEG 226
Query: 438 KYTIQDDGHSDWVSCVRFSPN 500
K + +S + + FSPN
Sbjct: 227 KKLYSLEANS-VIHALCFSPN 246
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Frame = +3
Query: 252 LALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 416
+ +S S DK++ LW D A G RR H+ V V S D + +SGS D ++L
Sbjct: 30 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 89
Query: 417 WNTLAECKYTIQDDGHSDWVSCVRFS 494
W+ LA T + GH+ V V FS
Sbjct: 90 WD-LAAGVSTRRFVGHTKDVLSVAFS 114
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 237
GH WV+ + +P I+S+S DKT+ VW L+ + + L GH+ ++S V +
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-----LRSTLAGHTGYVSTVAV 202
Query: 238 SSDGN 252
S DG+
Sbjct: 203 SPDGS 207
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 40 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 186
KLR TL GH G+V+ +A +P + S +D +++W L + Y +
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSL 232
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L SG D + LWDLA GK E ++ + ++ FS NR + + + IK+W+
Sbjct: 208 LCASGGKDGVVLLWDLAEGKKLYSLEANSV-IHALCFS-PNRYWLCAATEHGIKIWD--L 263
Query: 432 ECKYTIQD 455
E K ++D
Sbjct: 264 ESKSIVED 271
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +2
Query: 515 IVSCGWDRTVKVWH-LTNCKLKINH--LGHSGYLNTVTVSPD 631
IVS DRT+K+W+ L CK I+ GH +++ V SP+
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 161
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCK-----LKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
IIVS D+++ +W LT + GHS ++ V +S DG SG D
Sbjct: 30 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 84
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 157 bits (382), Expect = 6e-39
Identities = 84/166 (50%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
Frame = +3
Query: 255 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 434
ALSGSWD LRLWDLA G+TTRRF HTKDVLSVAFS DNRQIVS SRD+TIKLWNTL E
Sbjct: 78 ALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGE 137
Query: 435 CKYTIQD-DGHSDWVSCVRFSPNHANPLSYPVVGTELSRSGISLTVSSRXXXXXXXXXXX 611
CKYTI + DGH +WVSCVRFSPN P + + R
Sbjct: 138 CKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLN 197
Query: 612 XXXXXXXXXCVHLVVRT*RAMLWDLNDGKHLHTLDHNDIITALCFS 749
+ +LWDL +GK L++L+ II +LCFS
Sbjct: 198 TVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFS 243
Score = 94.7 bits (225), Expect = 6e-20
Identities = 42/75 (56%), Positives = 58/75 (77%)
Frame = +1
Query: 25 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 204
M+E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT 60
Query: 205 GHSHFISDVVLSSDG 249
GHSHF+ DVVLSSDG
Sbjct: 61 GHSHFVEDVVLSSDG 75
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = +2
Query: 509 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
P IVS WD+TVKVW+L NCKL+ + +GHSGYLNTV VSPDGSLCASGGKD
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKD 214
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+S SWDKT+++W+L K H+ + +VA S D SG +D I LW+ LAE
Sbjct: 167 VSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAEG 225
Query: 438 KYTIQDDGHSDWVSCVRFSPN 500
K + S + + FSPN
Sbjct: 226 KKLYSLEAGS-IIHSLCFSPN 245
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = +3
Query: 252 LALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 416
+ ++ S DK++ LW D + G RR H+ V V S D + +SGS D ++L
Sbjct: 30 IIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 89
Query: 417 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPLS 518
W+ LA + T + GH+ V V FS ++ +S
Sbjct: 90 WD-LATGETTRRFVGHTKDVLSVAFSTDNRQIVS 122
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 237
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNSLVGHSGYLNTVAV 201
Query: 238 SSDGN 252
S DG+
Sbjct: 202 SPDGS 206
Score = 34.7 bits (76), Expect = 0.066
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 31 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 186
+ KLR +L GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L SG D + LWDLA GK E + + S+ FS NR + + + +I++W+
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFS-PNRYWLCAATENSIRIWD--L 262
Query: 432 ECKYTIQD 455
E K ++D
Sbjct: 263 ESKSVVED 270
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 515 IVSCGWDRTVKVWH-LTNCKLKINH-LGHSGYLNTVTVSPD 631
IVS DRT+K+W+ L CK I+ GH +++ V SP+
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPN 160
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHL-----GHSGYLNTVTVSPDGSLCASGGKD 661
IIV+ D+++ +W LT GHS ++ V +S DG SG D
Sbjct: 30 IIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 84
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 156 bits (378), Expect = 2e-38
Identities = 83/166 (50%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
Frame = +3
Query: 255 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 434
ALSGSWD LRLWDLA G++TRRF HTKDVLSVAFS DNRQIVS SRD+TIKLWNTL E
Sbjct: 78 ALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGE 137
Query: 435 CKYTIQD-DGHSDWVSCVRFSPNHANPLSYPVVGTELSRSGISLTVSSRXXXXXXXXXXX 611
CKYTI + DGH +WVSCVRFSPN P + + R
Sbjct: 138 CKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLN 197
Query: 612 XXXXXXXXXCVHLVVRT*RAMLWDLNDGKHLHTLDHNDIITALCFS 749
+ +LWDL +GK L++L+ II +LCFS
Sbjct: 198 TVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFS 243
Score = 93.9 bits (223), Expect = 1e-19
Identities = 41/75 (54%), Positives = 58/75 (77%)
Frame = +1
Query: 25 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 204
M+E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT 60
Query: 205 GHSHFISDVVLSSDG 249
GHSHF+ DVVLSSDG
Sbjct: 61 GHSHFVQDVVLSSDG 75
Score = 90.2 bits (214), Expect = 1e-18
Identities = 39/51 (76%), Positives = 42/51 (82%)
Frame = +2
Query: 509 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
P IVS WD+TVKVW+L NCKL+ GHSGYLNTV VSPDGSLCASGGKD
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKD 214
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+S SWDKT+++W+L K H+ + +VA S D SG +D I LW+ LAE
Sbjct: 167 VSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAEG 225
Query: 438 KYTIQDDGHSDWVSCVRFSPN 500
K + S + + FSPN
Sbjct: 226 KKLYSLEAGS-IIHSLCFSPN 245
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Frame = +3
Query: 258 LSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
++ S DK++ LW D + G RR H+ V V S D + +SGS D ++LW+
Sbjct: 32 VTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWD 91
Query: 423 TLAECKYTIQDDGHSDWVSCVRFSPNHANPLS 518
LA + T + GH+ V V FS ++ +S
Sbjct: 92 -LATGESTRRFVGHTKDVLSVAFSTDNRQIVS 122
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +1
Query: 31 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 186
+ KLR TL GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 237
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNTLAGHSGYLNTVAV 201
Query: 238 SSDGN 252
S DG+
Sbjct: 202 SPDGS 206
Score = 34.7 bits (76), Expect = 0.066
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFSP 497
HT V ++A VDN IV+ SRDK+I LW E K Y + GHS +V V S
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 498 NHANPLS 518
+ LS
Sbjct: 74 DGQFALS 80
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L SG D + LWDLA GK E + + S+ FS NR + + + +I++W+
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFS-PNRYWLCAATENSIRIWD--L 262
Query: 432 ECKYTIQD 455
E K ++D
Sbjct: 263 ESKSVVED 270
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 515 IVSCGWDRTVKVWH-LTNCKLKINHL-GHSGYLNTVTVSPD 631
IVS DRT+K+W+ L CK I+ GH +++ V SP+
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPN 160
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL- 428
L +SGS+D+T+R+W++ GK R + H+ + SV F+ D IVS S D + K+W+
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Query: 429 AECKYTIQDDGHSDWVSCVRFSPN 500
C T+ DD S VS +FSPN
Sbjct: 202 GTCLKTLIDD-KSPAVSFAKFSPN 224
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L S S DKT+ LW R+E H+ + +A+S D+ S S D T+++W+ +
Sbjct: 57 LLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARS 116
Query: 432 --ECKYTIQDDGHSDWVSCVRFSP 497
EC ++ GH+++V CV F+P
Sbjct: 117 PYECLKVLR--GHTNFVFCVNFNP 138
Score = 45.6 bits (103), Expect = 4e-05
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV--AFSVDN-RQIVSGSRDKTIKLWNTL 428
L + D TL+L + A GK + + HT V + AFSV N + IVSGS D + LW+
Sbjct: 229 LVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQ 288
Query: 429 AECKYTIQDDGHSDWVSCVRFSP 497
A + +GH+D V V P
Sbjct: 289 AR-NILQRLEGHTDAVISVSCHP 310
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSGSR-DKTIKLW 419
+SGS D + LWDL A +R E HT V+SV+ V N SG+ DKTI++W
Sbjct: 274 VSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAE 434
S S D TLR+WD + + + HT V V F+ + IVSGS D+TI++W +
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGK 161
Query: 435 CKYTIQDDGHSDWVSCVRFS 494
C I+ HS +S V F+
Sbjct: 162 CVRMIK--AHSMPISSVHFN 179
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +1
Query: 52 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 231
TL GH ++ + + +++ S+S DKT+I+W T NY + R GHS ISD+
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91
Query: 232 VLSSDGN 252
SSD +
Sbjct: 92 AWSSDSH 98
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 318 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 494
+ E HT + V FS D + S S DKT+ LW+ + +GHS +S + +S
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSA-TNYSLIHRYEGHSSGISDLAWS 94
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+IVS +D T+++W + K HS +++V + DGSL S D
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHD 191
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
++ S D+T+ +W TN L + GHS ++ + S D S D
Sbjct: 57 LLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDD 106
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-L 428
+ +SGS+D+T+R+WD+ GK + H+ V +V F+ D IVS S D ++W++
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Query: 429 AECKYTIQDDGHSDWVSCVRFSPN 500
C T+ DD + VS VRFSPN
Sbjct: 187 GHCVKTLIDDENPP-VSFVRFSPN 209
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAE 434
+S S DKTL+LWD+ G + HT V F+ + IVSGS D+T+++W+ T +
Sbjct: 87 VSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGK 146
Query: 435 CKYTIQDDGHSDWVSCVRFS 494
C + HSD V+ V F+
Sbjct: 147 CLKVL--PAHSDPVTAVDFN 164
Score = 51.2 bits (117), Expect = 7e-07
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAA-----GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 416
L S S DKT+R + + + + F H + VAFS D R IVS S DKT+KL
Sbjct: 38 LLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKL 97
Query: 417 WNTLAECKYTIQD-DGHSDWVSCVRFSP 497
W+ E I+ GH+++ CV F+P
Sbjct: 98 WD--VETGSLIKTLIGHTNYAFCVNFNP 123
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 434
+SGS D + +W+L + K ++ E HT+ V++VA I SGS DKT+++W E
Sbjct: 259 VSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDH--TKDVLSVAFSVDN-RQIVSGSRDKTIKLWNTL 428
L G+ D TLRLW++++ K + + H + +S AFSV N ++IVSGS D + +W L
Sbjct: 214 LVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE-L 272
Query: 429 AECKYTIQDDGHSDWVSCVRFSP 497
K + +GH++ V V P
Sbjct: 273 NSKKLLQKLEGHTETVMNVACHP 295
Score = 34.3 bits (75), Expect = 0.088
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
IVS D+T+K+W + L +GH+ Y V +P ++ SG D
Sbjct: 86 IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFD 134
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +1
Query: 52 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 231
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 232 VLSSD 246
SSD
Sbjct: 78 AFSSD 82
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +1
Query: 31 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 210
ET L TL GH + + NP+ +MI+S S D+T+ +W +T G K L H
Sbjct: 101 ETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVTT-----GKCLKVLPAH 154
Query: 211 SHFISDVVLSSDGN 252
S ++ V + DG+
Sbjct: 155 SDPVTAVDFNRDGS 168
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+IVS +D TV++W +T K HS + V + DGSL S D
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYD 176
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
IVS D V +W L + KL GH+ + V P +L ASG D
Sbjct: 258 IVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLD 306
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
S S+DK++RLW+ G+ F H V V++S D+R ++SGS+D T+K+W K
Sbjct: 377 SASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWE--IRTK 434
Query: 441 YTIQD-DGHSDWVSCVRFSPN 500
QD GH+D V V +SP+
Sbjct: 435 KLKQDLPGHADEVFAVDWSPD 455
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
L LSGS D TL++W++ K + H +V +V +S D ++VSG +D+ +KLW
Sbjct: 416 LLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/81 (35%), Positives = 40/81 (49%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
SGS D T+RLWDL + H VL+VA+S D + +VSGS+ I WN
Sbjct: 126 SGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGEL 185
Query: 441 YTIQDDGHSDWVSCVRFSPNH 503
GH W++ + + P H
Sbjct: 186 EGSPLTGHKKWITGISWEPVH 206
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPN 500
H + VL V+FS D +Q+ SGS D T++LW+ E +T + GH +WV V +SP+
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCK--GHKNWVLTVAWSPD 162
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +2
Query: 470 LGVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 649
+G + Q+ + +++S D T+K+W + KLK + GH+ + V SPDG S
Sbjct: 402 VGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVS 461
Query: 650 GGKD 661
GGKD
Sbjct: 462 GGKD 465
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
++ S D R+WD+ K+ HT V V + D I +GS+D TIK+W T +
Sbjct: 215 VTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWET-TQG 272
Query: 438 KYTIQDDGHSDWVSCVRFSPNH 503
K + GH W++ + S +
Sbjct: 273 KLIRELKGHGHWINSLALSTEY 294
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+SGS D T+ LW+ + K + R H + V V FS D + I S S DK+++LWN
Sbjct: 333 VSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 106 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDG 249
P+ ++S S D T+ +W+ + + P+KRL GH ++ V S DG
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPDG 372
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGK 658
+ S D TV++W L GH ++ TV SPDG SG K
Sbjct: 124 LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSK 171
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 58 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 237
RGH G V Q++ + ++LS S+D TL +W++ + +P GH+ + V
Sbjct: 399 RGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLP-----GHADEVFAVDW 452
Query: 238 SSDG 249
S DG
Sbjct: 453 SPDG 456
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 631
II + D T+K+W T KL GH ++N++ +S +
Sbjct: 254 IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE 293
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 52 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 231
T +GH WV +A +P ++ S S+ + W + E G P L GH +I+ +
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL- 428
L S SWD T+RLWD+ A K T H DVL+VAF D +Q+ S + D I W+T+
Sbjct: 491 LLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIE 550
Query: 429 AECKYTIQ 452
YTI+
Sbjct: 551 GVLMYTIE 558
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L +G+ D +++W++ +G F +HT V ++ F DN ++S S D T++ W+
Sbjct: 363 LLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 419
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 473 GVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 652
G+M LTQ ++ S WD TV++W + K + H+ + TV PDG AS
Sbjct: 482 GLMFSPLTQ----LLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASS 537
Query: 653 GKD 661
D
Sbjct: 538 TLD 540
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 548 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 667
VW + GH +N VT SPD L A+G D K
Sbjct: 333 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNK 372
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL- 428
L S SWD T+RLWD+ A K T H DVL+VAF D +Q+ S + D I W+T+
Sbjct: 531 LLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIE 590
Query: 429 AECKYTIQ 452
YTI+
Sbjct: 591 GVLMYTIE 598
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L +G+ D +++W++ +G F +HT V ++ F DN ++S S D T++ W+
Sbjct: 403 LLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 459
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 473 GVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 652
G+M LTQ ++ S WD TV++W + K + H+ + TV PDG AS
Sbjct: 522 GLMFSPLTQ----LLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASS 577
Query: 653 GKD 661
D
Sbjct: 578 TLD 580
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 548 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 667
VW + GH +N VT SPD L A+G D K
Sbjct: 373 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNK 412
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAEC 437
+GS DKT+RLWD+ G+ R F H VLS+A S D R + SG D TI +W+ + A C
Sbjct: 516 TGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARC 575
Query: 438 KYTIQDDGHSDWVSCVRFS 494
+ GH+ V + +S
Sbjct: 576 ITPLM--GHNSCVWSLSYS 592
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
SG D T+ +WDL+ + H V S+++S + + SGS D T+KLW+ + K
Sbjct: 558 SGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTK 617
Query: 441 YTIQDD--GHSDWVSCVRFSPNHANPL 515
T ++ G+S+ + +R P + P+
Sbjct: 618 LTKAEEKNGNSNRLRSLRTFPTKSTPV 644
Score = 35.9 bits (79), Expect = 0.029
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAEC 437
S S D+T R+W + + R H DV + + I +GS DKT++LW+ EC
Sbjct: 477 SCSHDRTARIWSMDRIQPLRIMAGHLSDV---DWHPNCNYIATGSSDKTVRLWDVQTGEC 533
Query: 438 KYTIQDDGHSDWVSCVRFSPN 500
GH V + SP+
Sbjct: 534 VRIF--IGHRSMVLSLAMSPD 552
Score = 34.7 bits (76), Expect = 0.066
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
LS S D T+RLW ++ H V FS S S D+T ++W+
Sbjct: 434 LSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWS 488
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 533 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
D+TV++W + + +GH + ++ +SPDG ASG +D
Sbjct: 520 DKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDED 562
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 533 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
D T+ +W L+ + +GH+ + +++ S +GSL ASG D
Sbjct: 562 DGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSAD 604
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 174
L GH+G V +P D +LSSS D T+ +W + N
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNAN 452
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAE 434
++ S DKT+++W ++ G + FE HT VL +F D Q VS D +KLWN +E
Sbjct: 557 MTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSE 616
Query: 435 CKYTIQDDGHSDWV 476
C T D H D V
Sbjct: 617 CIATY--DQHEDKV 628
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
+ +SGS D T+R+WDL A T ++ E H V S+A S D + S RDK + LW
Sbjct: 160 ILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
Query: 420 NTL-AECKYTI 449
+ CK T+
Sbjct: 220 DLHDYSCKATV 230
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 422
L ++GS DKT+RLW+ + H D+L+VAF+ + VSGS D+T+K+W+
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAG----------KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 407
+SGS D+TL++W L KT H KD+ SVA + ++ + +GS D+T
Sbjct: 463 VSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRT 522
Query: 408 IKLWNTLAECKYTIQDDGHSDWVSCVRFS 494
+W L + + + GH + V FS
Sbjct: 523 ASIWR-LPDLVHVVTLKGHKRRIFSVEFS 550
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
L +GS D+T +W L + H + + SV FS ++ +++ S DKT+K+W
Sbjct: 513 LVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +3
Query: 282 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRDKTIKLWNTLAECKYTIQ 452
+R++D+A + H + VLS+ V N IV+GS+DKT++LWN ++ +
Sbjct: 383 VRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGV- 441
Query: 453 DDGHSDWVSCVRFS 494
GH+ + V F+
Sbjct: 442 GTGHNGDILAVAFA 455
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 667
++ S G R ++VW L K + GH G + + G L A+ G D K
Sbjct: 74 LLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRK 125
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 49 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 159
G GHNG + +A K +S S D+TL VW L
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 518 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
VSCG D +K+W++ + + H + + V + A+GG D
Sbjct: 599 VSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGD 646
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLW 419
++ S D+T LWD+ G T F HT DVLSV+ S N +SGS D T +LW
Sbjct: 173 ITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLW 232
Query: 420 NTLAECKYTIQDDGHSDWVSCVRFSPN 500
+T A + GH V+ V+F P+
Sbjct: 233 DTRAASRAVRTFHGHEGDVNTVKFFPD 259
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +3
Query: 318 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 497
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Query: 498 N 500
N
Sbjct: 118 N 118
Score = 31.5 bits (68), Expect = 0.62
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLA 431
+S S D L +W+ + T + V++ AFS + + + G D ++ ++ A
Sbjct: 81 VSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTA 140
Query: 432 ECKYTIQDD----GHSDWVSCVRFSPN 500
+ T+ GH +VSC ++ PN
Sbjct: 141 DKDGTVPVSRMLTGHRGYVSCCQYVPN 167
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 34 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 162
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 518 VSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKD 661
+S D T ++W + GH G +NTV PDG +G D
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDD 269
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLW 419
++ S D+T LWD+ G T F HT DVLSV+ S N +SGS D T +LW
Sbjct: 111 ITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLW 170
Query: 420 NTLAECKYTIQDDGHSDWVSCVRFSPN 500
+T A + GH V+ V+F P+
Sbjct: 171 DTRAASRAVRTFHGHEGDVNTVKFFPD 197
Score = 31.5 bits (68), Expect = 0.62
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLA 431
+S S D L +W+ + T + V++ AFS + + + G D ++ ++ A
Sbjct: 19 VSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTA 78
Query: 432 ECKYTIQDD----GHSDWVSCVRFSPN 500
+ T+ GH +VSC ++ PN
Sbjct: 79 DKDGTVPVSRMLTGHRGYVSCCQYVPN 105
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 34 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 162
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 125
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 345 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 500
V S+ ++ + +IVS S+D + +WN L K T WV FSPN
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSPN 56
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 518 VSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKD 661
+S D T ++W + GH G +NTV PDG +G D
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDD 207
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLW 419
++ S D+T LWD+ G T F HT DVLSV+ S N +SGS D T +LW
Sbjct: 173 ITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLW 232
Query: 420 NTLAECKYTIQDDGHSDWVSCVRFSPN 500
+T A + GH V+ V+F P+
Sbjct: 233 DTRAASRAVRTFHGHEGDVNTVKFFPD 259
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +3
Query: 318 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 497
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Query: 498 N 500
N
Sbjct: 118 N 118
Score = 31.5 bits (68), Expect = 0.62
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLA 431
+S S D L +W+ + T + V++ AFS + + + G D ++ ++ A
Sbjct: 81 VSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTA 140
Query: 432 ECKYTIQDD----GHSDWVSCVRFSPN 500
+ T+ GH +VSC ++ PN
Sbjct: 141 DKDGTVPVSRMLTGHRGYVSCCQYVPN 167
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 34 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 162
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 518 VSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKD 661
+S D T ++W + GH G +NTV PDG +G D
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDD 269
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
S S+D T++LWD GK F H + V S+AFS + I SGS DK+I +W+
Sbjct: 516 SASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWS 569
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
L+GS D+T +WD+ A + ++FE H+ L V + +N + S D I L + E
Sbjct: 381 LTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSMIYLCK-IGET 438
Query: 438 KYTIQDDGHSDWVSCVRFSP 497
+ GH V+CV++ P
Sbjct: 439 RPAKTFTGHQGEVNCVKWDP 458
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV-------DNRQ--IVSGSRDK 404
L S S D T ++W++ +HTK++ ++ +S N+Q + S S D
Sbjct: 462 LLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDS 521
Query: 405 TIKLWNTLAEC-KYTIQDDGHSDWVSCVRFSPN 500
T+KLW+ AE K +GH + V + FSPN
Sbjct: 522 TVKLWD--AELGKMLCSFNGHREPVYSLAFSPN 552
Score = 35.9 bits (79), Expect = 0.029
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L +GS D R+W L G+ H + S+ ++ +++GS D+T +W+ A
Sbjct: 338 LLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKA 396
Query: 432 ECKYTIQDDGHS------DWVSCVRFSPNHANPLSY 521
E ++ Q + HS DW + V F+ + + + Y
Sbjct: 397 E-EWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIY 431
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 506 QPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
Q + S +D TVK+W K+ + GH + ++ SP+G ASG D
Sbjct: 511 QLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLD 562
Score = 31.5 bits (68), Expect = 0.62
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +3
Query: 318 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 497
R E HT +V + A+S + SGS D T ++W ++ E + G + ++ +
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIW-SIPEGSFKAVHTGRNINALILKHAK 317
Query: 498 NHANPLSYPVVGTELSRSGISLTVSS 575
+N S V + + G L S
Sbjct: 318 GKSNEKSKDVTTLDWNGEGTLLATGS 343
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 40 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 171
+L TL H G + + N K D +L+ S D+T +VW + +E
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEE 398
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN-TLAE 434
S +D ++LWD+ G+ F +H K SV FS ++ SGS D ++KLWN
Sbjct: 771 SSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERN 830
Query: 435 CKYTIQDDGHSDWVSCVRFSPNHANPLSY 521
C TI++ + V CV+FSP ++ L++
Sbjct: 831 CLGTIRNIAN---VCCVQFSPQSSHLLAF 856
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
H K V S A +DN +V+ S D T+KLW+
Sbjct: 881 HNKAV-SYAKFLDNETLVTASTDNTLKLWD 909
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L L+G+ ++LWD+ K R F H + +V F + SGS D +K+W+
Sbjct: 72 LVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK 131
Query: 432 E-CKYTIQDDGHSDWVSCVRFSPN 500
+ C T + GHS +S +RF+P+
Sbjct: 132 KGCIQTYK--GHSRGISTIRFTPD 153
Score = 48.4 bits (110), Expect = 5e-06
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
SGS D L++WD+ + ++ H++ + ++ F+ D R +VSG D +K+W+ A
Sbjct: 117 SGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTA 173
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 158 VSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L ++G D + LW + + HT V SVAF +++G+ IKLW+ +
Sbjct: 30 LFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWD-VE 88
Query: 432 ECKYTIQDDGHSDWVSCVRFSP 497
E K GH S V F P
Sbjct: 89 EAKMVRAFTGHRSNCSAVEFHP 110
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+VS G D VKVW LT KL H G + ++ P L A+G D
Sbjct: 157 VVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSAD 205
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 533 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
D +K+W + + GHS ++T+ +PDG SGG D
Sbjct: 121 DANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLD 163
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L +GS D+T++ WDL + V S+ F D R + G D ++K+++
Sbjct: 198 LLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCG-LDDSLKVYS 253
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +2
Query: 500 SCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
S + ++++ +K+W + K+ GH + V P G ASG D
Sbjct: 68 SAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSD 121
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L L+G+ ++LWDL K R F H + +V F + SGS D +++W+T
Sbjct: 21 LVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRK 80
Query: 432 E-CKYTIQDDGHSDWVSCVRFSPN 500
+ C T + GH+ +S + FSP+
Sbjct: 81 KGCIQTYK--GHTRGISTIEFSPD 102
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
SGS D LR+WD + ++ HT+ + ++ FS D R +VSG D +K+W+ A
Sbjct: 66 SGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 122
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 107 VSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWD 161
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 497
HT V SVAF+ + +++G+ IKLW+ L E K GH S V F P
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWD-LEESKMVRAFTGHRSNCSAVEFHP 59
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+VS G D VKVW LT KL H G + ++ P L A+G D
Sbjct: 106 VVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSAD 154
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 533 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
D ++VW + GH+ ++T+ SPDG SGG D
Sbjct: 70 DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLD 112
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 401
L +GS D+T++ WDL + V ++AF D + + G D
Sbjct: 147 LLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDD 196
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 542 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+K+W L K+ GH + V P G ASG D
Sbjct: 31 IKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSD 70
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TL 428
LA S D R+WDL G++ F+ H K V SV FS + + SG D ++W+ +
Sbjct: 395 LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRM 454
Query: 429 AECKYTIQDDGHSDWVSCVRFSP 497
+ Y I H++ VS V++ P
Sbjct: 455 RKSLYII--PAHANLVSQVKYEP 475
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/78 (34%), Positives = 37/78 (47%)
Frame = +3
Query: 267 SWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 446
S+DKT RLWD+ G E H++ V +AF D S D ++W+ L +
Sbjct: 358 SYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWD-LRTGRSI 416
Query: 447 IQDDGHSDWVSCVRFSPN 500
+ GH V V FSPN
Sbjct: 417 LVFQGHIKPVFSVNFSPN 434
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
+ S D+T +LW G + FE H + VAF + + + S DKT +LW+ +
Sbjct: 315 TASADRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAE 373
Query: 441 YTIQDDGHSDWVSCVRFSPNHA 506
+Q +GHS V + F + A
Sbjct: 374 LLLQ-EGHSRSVYGIAFQQDGA 394
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 285 RLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 461
+LW++ T +DH + V FS + + + S D+T KLW T T +G
Sbjct: 280 KLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTF--EG 337
Query: 462 HSDWVSCVRFSPN 500
H D ++ V F P+
Sbjct: 338 HLDRLARVAFHPS 350
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+ SCG D +VW L + + GH + +V SP+G ASGG+D
Sbjct: 395 LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGED 444
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
+ S+D + +W + H V S+ + D+ I + S D+TIKLW +
Sbjct: 483 TASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTS 537
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 530 WDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+D+T ++W + T +L + GHS + + DG+L AS G D
Sbjct: 359 YDKTWRLWDINTGAELLLQE-GHSRSVYGIAFQQDGALAASCGLD 402
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/81 (30%), Positives = 41/81 (50%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+SG D +++WDL AGK F+ H + S+ F + +GS DKT+K W+ L
Sbjct: 252 VSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWD-LETF 310
Query: 438 KYTIQDDGHSDWVSCVRFSPN 500
+ + V C+ F+P+
Sbjct: 311 ELIGSGGTETTGVRCLTFNPD 331
Score = 50.8 bits (116), Expect = 9e-07
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L +G+ T++LWDL K R H + +SV F SGS D +K+W+
Sbjct: 166 LVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 225
Query: 432 E-CKYTIQDDGHSDWVSCVRFSPN 500
+ C +T + GH+ V+ +RF+P+
Sbjct: 226 KGCIHTYK--GHTRGVNVLRFTPD 247
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
SGS D L++WD+ ++ HT+ V + F+ D R IVSG D +K+W+ L K
Sbjct: 211 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWD-LTAGK 269
Query: 441 YTIQDDGHSDWVSCVRFSPN 500
+ H + + F P+
Sbjct: 270 LLHEFKSHEGKIQSLDFHPH 289
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 126 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD-LEEA 184
Query: 438 KYTIQDDGHSDWVSCVRFSP 497
K GH V F P
Sbjct: 185 KVVRTLTGHRSNCVSVNFHP 204
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
IVS G D VKVW LT KL H G + ++ P L A+G D
Sbjct: 251 IVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSAD 299
Score = 31.5 bits (68), Expect = 0.62
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 533 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
D +K+W + + GH+ +N + +PDG SGG+D
Sbjct: 215 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGED 257
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L +GS DKT++ WDL + T V + F+ D + ++ G ++ ++K+++
Sbjct: 292 LLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQE-SLKIFS 347
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 476 VMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 652
V C + + ++V+ G D V +W + ++ GHS +++VT L A+G
Sbjct: 112 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAG 170
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 539 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
T+K+W L K+ GH +V P G ASG D
Sbjct: 175 TIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLD 215
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L S + D T LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 386
++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 68 ITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
++ SC D T +W N + + GH+G + VS D S +G D
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSAD 73
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L S + D T LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 386
++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 68 ITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
++ SC D T +W N + + GH+G + VS D S +G D
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSAD 73
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 590 GHSGYLNTVTVSPDGSLCASGGKD 661
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L S + D T LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 386
++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 68 ITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
++ SC D T +W N + + GH+G + VS D S +G D
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSAD 73
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 590 GHSGYLNTVTVSPDGSLCASGGKD 661
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 50.8 bits (116), Expect = 9e-07
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L +G+ T++LWDL K R H + +SV F SGS D +K+W+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 432 E-CKYTIQDDGHSDWVSCVRFSPN 500
+ C +T + GH+ V+ +RF+P+
Sbjct: 133 KGCIHTYK--GHTRGVNVLRFTPD 154
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
SGS D L++WD+ ++ HT+ V + F+ D R +VSG D +K+W+ L K
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD-LTAGK 176
Query: 441 YTIQDDGHSDWVSCVRFSPN 500
+ H + + F P+
Sbjct: 177 LLTEFKSHEGQIQSLDFHPH 196
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+ L
Sbjct: 159 VSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD-LETF 217
Query: 438 KYTIQDDGHSDWVSCVRFSPN 500
+ + V C+ F+P+
Sbjct: 218 ELIGSGGPETAGVRCLSFNPD 238
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+VS G D VKVW LT KL H G + ++ P L A+G D
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSAD 206
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 438 KYTIQDDGHSDWVSCVRFSP 497
K GH V F P
Sbjct: 92 KIVRTLTGHRSNCISVDFHP 111
Score = 31.5 bits (68), Expect = 0.62
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 533 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
D +K+W + + GH+ +N + +PDG SGG+D
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGED 164
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 491 LTQSCQPIIVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+T ++V+ G T+K+W L K+ GH +V P G ASG D
Sbjct: 65 VTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L +GS D+T++ WDL + T V ++F+ D + ++ G ++ ++K+++
Sbjct: 199 LLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFS 254
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 476 VMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 652
V C + + ++V+ G D V +W + ++ GHS +++VT L A+G
Sbjct: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAG 77
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 50.8 bits (116), Expect = 9e-07
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L +G+ T++LWDL K R H + +SV F SGS D +K+W+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 432 E-CKYTIQDDGHSDWVSCVRFSPN 500
+ C +T + GH+ V+ +RF+P+
Sbjct: 133 KGCIHTYK--GHTRGVNVLRFTPD 154
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
SGS D L++WD+ ++ HT+ V + F+ D R +VSG D +K+W+ L K
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD-LTAGK 176
Query: 441 YTIQDDGHSDWVSCVRFSPN 500
+ H + + F P+
Sbjct: 177 LLTEFKSHEGQIQSLDFHPH 196
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+ L
Sbjct: 159 VSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD-LETF 217
Query: 438 KYTIQDDGHSDWVSCVRFSPN 500
+ + V C+ F+P+
Sbjct: 218 ELIGSGGPETAGVRCLSFNPD 238
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+VS G D VKVW LT KL H G + ++ P L A+G D
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSAD 206
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 438 KYTIQDDGHSDWVSCVRFSP 497
K GH V F P
Sbjct: 92 KIVRTLTGHRSNCISVDFHP 111
Score = 31.5 bits (68), Expect = 0.62
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 533 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
D +K+W + + GH+ +N + +PDG SGG+D
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGED 164
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 491 LTQSCQPIIVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+T ++V+ G T+K+W L K+ GH +V P G ASG D
Sbjct: 65 VTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L +GS D+T++ WDL + T V ++F+ D + ++ G ++ ++K+++
Sbjct: 199 LLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFS 254
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 476 VMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 652
V C + + ++V+ G D V +W + ++ GHS +++VT L A+G
Sbjct: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAG 77
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 509
HT DVL +A+S D+ ++S S+DKT++LW T C + H+++V+CV F+P + N
Sbjct: 271 HTGDVLDLAWS-DSNLLLSASKDKTVRLWRT--GCDQCLHVFHHNNYVTCVEFNPVNKN 326
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTL 428
L LS S DKT+RLW + F H V V F+ V+ SGS D ++W L
Sbjct: 285 LLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNNFASGSIDGKARIWG-L 342
Query: 429 AECKYTIQDDGHSDWVSCVRFSPN 500
+E + D D +S + + PN
Sbjct: 343 SEERVVAWTDVR-DSISAISYQPN 365
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 575 KINHLGHSGYLNTVTVSPDGSLCASGGKD 661
KIN GH G + T+ SPDG A+GG+D
Sbjct: 193 KIN--GHKGKIWTLKFSPDGKYLATGGED 219
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 171
L GH G V +A + +++LS+S+DKT+ +W+ D+
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQ 304
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/58 (37%), Positives = 40/58 (68%)
Frame = +3
Query: 324 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 497
F+ H DVL +A+S ++ ++S S DKT++LWN ++ ++ HSD+V+C++F+P
Sbjct: 509 FQGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQT--CLKVFSHSDYVTCIQFNP 563
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 422
LS S DKT+RLW+L++ +T + H+ V + F+ VD+R +SGS D +++W+
Sbjct: 528 LSSSMDKTVRLWNLSS-QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWS 582
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMK 667
++S D+TV++W+L++ + + HS Y+ + +P D SG D K
Sbjct: 527 LLSSSMDKTVRLWNLSS-QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAK 577
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLA 431
LS S D ++LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L
Sbjct: 115 LSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN-LG 173
Query: 432 ECKYTIQDDGHSDWVSCVRFSPNHANPLSYPVVGTE 539
D H V+CV + P Y + G++
Sbjct: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKP--YLITGSD 207
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
++GS D T ++WD + E HT +V +V F + I++GS D T+++W+
Sbjct: 203 ITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 61 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 240
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ V
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 241 SDGN*PFPVLGT 276
+ G+ P+ + G+
Sbjct: 195 TGGDKPYLITGS 206
Score = 35.9 bits (79), Expect = 0.029
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
L+ + TL +W+ + FE V S F + +V+G+ D I+++N
Sbjct: 31 LASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNTMD 90
Query: 438 KYTIQDDGHSDWVSCVRFSP 497
K + + HSD++ CV P
Sbjct: 91 KVKVFE-AHSDYIRCVAVHP 109
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 509 PIIVSCGWDRTVKVWHLTNCKLK 577
PII++ D TV++WH T +L+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLE 264
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLA 431
LS S D ++LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L
Sbjct: 115 LSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN-LG 173
Query: 432 ECKYTIQDDGHSDWVSCVRFSPNHANPLSYPVVGTE 539
D H V+CV + P Y + G++
Sbjct: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKP--YLITGSD 207
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
++GS D T ++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 203 ITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 61 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 240
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ V
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 241 SDGN*PFPVLGT 276
+ G+ P+ + G+
Sbjct: 195 TGGDKPYLITGS 206
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
L+ + T+ +W+ T+ FE V S F + +V+G+ D I+++N
Sbjct: 31 LASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMD 90
Query: 438 KYTIQDDGHSDWVSCVRFSP 497
K + + HSD++ CV P
Sbjct: 91 KVKVFE-AHSDYIRCVAVHP 109
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 509 PIIVSCGWDRTVKVWHLTNCKLK 577
PII++ D TV++WH T +L+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLE 264
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLA 431
LS S D ++LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L
Sbjct: 115 LSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN-LG 173
Query: 432 ECKYTIQDDGHSDWVSCVRFSPNHANPLSYPVVGTE 539
D H V+CV + P Y + G++
Sbjct: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKP--YLITGSD 207
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
++GS D T ++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 203 ITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 61 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 240
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ V
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 241 SDGN*PFPVLGT 276
+ G+ P+ + G+
Sbjct: 195 TGGDKPYLITGS 206
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
L+ + T+ +W+ T+ FE V S F + +V+G+ D I+++N
Sbjct: 31 LASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMD 90
Query: 438 KYTIQDDGHSDWVSCVRFSP 497
K + + HSD++ CV P
Sbjct: 91 KVKVFE-AHSDYIRCVAVHP 109
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 509 PIIVSCGWDRTVKVWHLTNCKLK 577
PII++ D TV++WH T +L+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLE 264
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLA 431
LS S D ++LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L
Sbjct: 115 LSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN-LG 173
Query: 432 ECKYTIQDDGHSDWVSCVRFSPNHANPLSYPVVGTE 539
D H V+CV + P Y + G++
Sbjct: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKP--YLITGSD 207
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
++GS D T ++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 203 ITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 61 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 240
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ V
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 241 SDGN*PFPVLGT 276
+ G+ P+ + G+
Sbjct: 195 TGGDKPYLITGS 206
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
L+ + T+ +W+ T+ FE V S F + +V+G+ D I+++N
Sbjct: 31 LASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMD 90
Query: 438 KYTIQDDGHSDWVSCVRFSP 497
K + + HSD++ CV P
Sbjct: 91 KVKVFE-AHSDYIRCVAVHP 109
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 509 PIIVSCGWDRTVKVWHLTNCKLK 577
PII++ D TV++WH T +L+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLE 264
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/78 (33%), Positives = 46/78 (58%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
SGS D +++W + G RRF+ H++ V S++FS D Q++S S D+T ++ + L K
Sbjct: 280 SGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI-HGLKSGK 338
Query: 441 YTIQDDGHSDWVSCVRFS 494
+ GH+ +V+ F+
Sbjct: 339 LLKEFRGHTSYVNHAIFT 356
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAE 434
LS S+D+T R+ L +GK + F HT V F+ D +I++ S D T+K+W++ +
Sbjct: 321 LSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTD 380
Query: 435 CKYTIQ 452
C T +
Sbjct: 381 CLQTFK 386
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTR--------RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 416
S S D + +WD +GK + F H VL + FS D+ + SGS+D IK+
Sbjct: 230 SSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKI 289
Query: 417 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPLS 518
W + + D HS V+ + FS + + LS
Sbjct: 290 WR-IRTGVCIRRFDAHSQGVTSLSFSRDGSQLLS 322
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
++S +D+T ++ L + KL GH+ Y+N + DGS + D
Sbjct: 320 LLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSD 368
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
DK L ++ +G H KDV+ + + + S D T+KLW
Sbjct: 461 DKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLATYSEDCTMKLW 509
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 282 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 458
++LWD G RF++H V V F VSG D IK+WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLL-- 90
Query: 459 GHSDWVSCVRFSPNHANP 512
GH D++ V+F +H NP
Sbjct: 91 GHLDYIRTVQF--HHENP 106
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/82 (29%), Positives = 41/82 (50%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L +SG D +++W+ + H + +V F +N IVS S D+TI++WN +
Sbjct: 65 LFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQS 124
Query: 432 ECKYTIQDDGHSDWVSCVRFSP 497
++ GH+ +V C F P
Sbjct: 125 RTCISVL-TGHNHYVMCASFHP 145
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L +SG+ D+ ++LW + K H +V SV F IVS S DK+I++W+
Sbjct: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 34.7 bits (76), Expect = 0.066
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+S S D+T+R+W+ + H V+ +F +VS S D+T+++W+
Sbjct: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 506 QPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
QP+ VS G D +KVW+ + LGH Y+ TV + S D
Sbjct: 63 QPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDD 114
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 22 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 165
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 231
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDL 188
Score = 28.3 bits (60), Expect(2) = 0.043
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 327 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRF 491
E H + V +F IVSG+ D+ +KLW + E K D GH + VS V F
Sbjct: 201 EGHDRGVNWASFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMF 256
Score = 25.8 bits (54), Expect(2) = 0.043
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGK 311
L +S S D+T+R+WD+ A K
Sbjct: 149 LVVSASLDQTVRVWDIGALK 168
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAEC 437
S +D R+WDL + F+ H K VLSV FS + + SG D ++W+ + +
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKL 206
Query: 438 KYTIQDDGHSDWVSCVRFSP 497
Y I H + VS V++ P
Sbjct: 207 LYII--PAHVNLVSQVKYEP 224
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 506 QPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
Q S G+D +VW L + + GH + +V SP+G ASGG+D
Sbjct: 142 QTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGED 193
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 333 HTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 425
H + V V FS VD+ + + S D+T K+W T
Sbjct: 105 HKEHVTDVVFSSVDDECLATASTDRTEKIWKT 136
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 48.8 bits (111), Expect = 4e-06
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLA 431
LS S D ++LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L
Sbjct: 115 LSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN-LG 173
Query: 432 ECKYTIQDDGHSDWVSCVRFSPNHANPLSYPVVGTE 539
D H V+CV + P Y + G++
Sbjct: 174 SPDPNFTLDAHLKGVNCVDYFTGGDKP--YLITGSD 207
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
++GS D T ++WD + E HT +V +V+F + I++GS D T+++W+
Sbjct: 203 ITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 61 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 240
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ V
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHLKGVNCVDYF 194
Query: 241 SDGN*PFPVLGT 276
+ G+ P+ + G+
Sbjct: 195 TGGDKPYLITGS 206
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 509 PIIVSCGWDRTVKVWHLTNCKLK 577
PII++ D TV++WH T +L+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLE 264
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 47.6 bits (108), Expect = 9e-06
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAE 434
LS S DKT+RLWDL++ KT + H+ V + F+ VD+ +SGS D +++W ++ +
Sbjct: 483 LSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIW-SIPD 540
Query: 435 CKYTIQDDGHSDWVSCVRFSPNHANPLSYPVVGT 536
+ +D H + V+ ++P+ L GT
Sbjct: 541 HQVVDWNDLH-EMVTAACYTPDGQGALVGSYKGT 573
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = +3
Query: 324 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 497
F H DVL +++S ++ ++S S DKT++LW+ K ++ HSD+V+C++F+P
Sbjct: 464 FVGHLDDVLDLSWS-KSQHLLSSSMDKTVRLWD--LSSKTCLKVFSHSDYVTCIQFNP 518
Score = 31.9 bits (69), Expect = 0.47
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKGDVVGSER 691
++S D+TV++W L++ K + HS Y+ + +P D + SG D K +
Sbjct: 482 LLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI----- 535
Query: 692 WQTPPH 709
W P H
Sbjct: 536 WSIPDH 541
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L SGSWDKTL++W L+ K + H + +VA D+ + +GS D T+K+W
Sbjct: 263 LLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDD-LLFTGSADGTLKVWKREL 321
Query: 432 ECKYT 446
+ K T
Sbjct: 322 QGKGT 326
Score = 34.3 bits (75), Expect = 0.088
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
++ S WD+T+KVW L++ K + H +NTV D L +G D
Sbjct: 263 LLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFD-DLLFTGSAD 311
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 47.6 bits (108), Expect = 9e-06
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-- 434
+G D T L+D +G+ H+K V SV F D+ +++ S DKT+++W +
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 298
Query: 435 --CKYTIQDDGHSDWVSCVRFSPNHANPLSYPVVGT 536
C YT+ D HS V V P + +S + GT
Sbjct: 299 YACGYTLND--HSAEVRAVTVHPTNKYFVSASLDGT 332
Score = 35.5 bits (78), Expect = 0.038
Identities = 12/54 (22%), Positives = 33/54 (61%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+G+ +++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 370 TGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 34.3 bits (75), Expect = 0.088
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +3
Query: 252 LALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 413
L L+ S DKT+R+W + A G T DH+ +V +V N+ VS S D T
Sbjct: 278 LVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVTVHPTNKYFVSASLDGTWC 334
Query: 414 LWN-TLAECKYTIQDDGHSDWVSCVRFSPN 500
++ + C + DD + + F P+
Sbjct: 335 FYDLSSGSCLAQVSDDSKNVDYTAAAFHPD 364
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 40 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 174
++ TL GH+ VT + D++L++S DKT+ +W+ D N
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGDGN 298
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 47.6 bits (108), Expect = 9e-06
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-- 434
+G D T L+D +G+ H+K V SV F D+ +++ S DKT+++W +
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 298
Query: 435 --CKYTIQDDGHSDWVSCVRFSPNHANPLSYPVVGT 536
C YT+ D HS V V P + +S + GT
Sbjct: 299 YACGYTLND--HSAEVRAVTVHPTNKYFVSASLDGT 332
Score = 35.5 bits (78), Expect = 0.038
Identities = 12/54 (22%), Positives = 33/54 (61%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+G+ +++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 370 TGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 34.3 bits (75), Expect = 0.088
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +3
Query: 252 LALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 413
L L+ S DKT+R+W + A G T DH+ +V +V N+ VS S D T
Sbjct: 278 LVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVTVHPTNKYFVSASLDGTWC 334
Query: 414 LWN-TLAECKYTIQDDGHSDWVSCVRFSPN 500
++ + C + DD + + F P+
Sbjct: 335 FYDLSSGSCLAQVSDDSKNVDYTAAAFHPD 364
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 40 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 174
++ TL GH+ VT + D++L++S DKT+ +W+ D N
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGDGN 298
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
L SGSWDKTL++W L+ K E H V +V D+ + +GS D T+K+W
Sbjct: 259 LLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDD-LVFTGSADGTLKVW 313
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
++ S WD+T+KVW L++ K + H +NTV VS L +G D
Sbjct: 259 LLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV-VSGFDDLVFTGSAD 307
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 485
H V ++ + D + SGS DKT+K+W L++ K + H D V+ V
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWR-LSDSKCLESIEAHDDAVNTV 293
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
+ L+G DK + WD+ G+ T+ ++ H V ++ F +NR+ V+ S DK++++W
Sbjct: 384 ILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 439
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
L LS D +++WD+ +GK R + H K V + FS D + ++ DK IK W+T
Sbjct: 297 LLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDT 355
Score = 35.1 bits (77), Expect = 0.050
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +1
Query: 40 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 219
+L T GH V+ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 220 ISDVVLSSDGN 252
+ D+ S+DG+
Sbjct: 329 VRDICFSNDGS 339
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLA 431
L+ +DK ++ WD G+ F + D++Q +++G DK I W+ +
Sbjct: 342 LTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD-IN 400
Query: 432 ECKYTIQDDGHSDWVSCVRFSPNH 503
+ T + D H V+ + F N+
Sbjct: 401 TGEVTQEYDQHLGAVNTITFVDNN 424
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +3
Query: 246 R*LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKL 416
R + SGS DK +++WD+A GK E H K V +VA++ ++ +SGSRD+T+ L
Sbjct: 227 RNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +3
Query: 354 VAFSVDNRQIV-SGSRDKTIKLWN-TLAECKYTIQ 452
+ F+ +NR IV SGS DK +K+W+ +CK T++
Sbjct: 220 LTFNWENRNIVASGSEDKKVKVWDVATGKCKVTME 254
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/83 (31%), Positives = 47/83 (56%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L +SGS D T +LWD+ + F D + + +V+FS +I +G D +K+W+ L
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWD-LR 210
Query: 432 ECKYTIQDDGHSDWVSCVRFSPN 500
+ + T+ +GH D ++ + SP+
Sbjct: 211 KGEATMTLEGHQDTITGMSLSPD 233
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 422
+S S DKT+R WD+ GK ++ +H+ V S + I+SGS D T KLW+
Sbjct: 112 VSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L SGS D+ + LW + K + H +L + ++ D QIVS S DKT++ W+
Sbjct: 67 LIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWD 124
Score = 36.7 bits (81), Expect = 0.016
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+G D +++WDL G+ T E H + ++ S D +++ D + +W+
Sbjct: 197 TGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 667
I + G D VKVW L + + GH + +++SPDGS + G D K
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNK 245
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 470
H V ++ F+ I SGS D+ I LW +CK + GH +
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKN 97
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 416
+GS D+ + +WD + +T + HT V F I S S DK I L
Sbjct: 289 AGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAEC 437
S ++ + +WD+ ++ +E+H K SV FS + +VSGS D +K+W T E
Sbjct: 438 SSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEA 497
Query: 438 KYTIQDDGHSDWVSCVRFSPNHAN 509
I D ++ + CV+++P +N
Sbjct: 498 S-VINIDMKAN-ICCVKYNPGSSN 519
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
S S D TLRLWD+ R F HT + V +V++ + GS + +++
Sbjct: 565 SASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYH 618
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/82 (28%), Positives = 44/82 (53%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 452
D LR++D K + + +L ++S+D + I++G D +++W+ + + K
Sbjct: 324 DGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQVWS-MEDRKVVAW 382
Query: 453 DDGHSDWVSCVRFSPNHANPLS 518
+GH+ WVS V F N ++P S
Sbjct: 383 GEGHNSWVSGVAFDSNWSSPNS 404
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/57 (31%), Positives = 35/57 (61%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 428
+ G + LW++A GK +++ H + V + FS D+ +VSGS+D +I++W+ +
Sbjct: 94 VGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLI 150
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 503 CQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 667
C +I+S DRT KVW L+ KL + ++ +N + + P G + +G +D K
Sbjct: 186 CNAVIISSSEDRTCKVWSLSRGKL-LKNIIFPSVINALALDPGGCVFYAGARDSK 239
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 13/70 (18%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAA---------GKTT--RRFEDHTKDVLSVAFSVD--NRQIVSG 392
L +SGS D ++R+W L G T F +HT V + N I+S
Sbjct: 134 LLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISS 193
Query: 393 SRDKTIKLWN 422
S D+T K+W+
Sbjct: 194 SEDRTCKVWS 203
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 422
L LS S DKT+RLWD+ KT + H V + FS VD +SGS D I++W+
Sbjct: 519 LLLSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWS 575
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 509
H +L +++S ++ ++S S DKT++LW+ E K ++ H+D+V+C++FSP N
Sbjct: 505 HLDAILDLSWS-KSQLLLSSSMDKTVRLWDI--ETKTCLKLFAHNDYVTCIQFSPVDEN 560
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 491 LTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMK 667
L+ S +++S D+TV++W + K + H+ Y+ + SP D + SG D K
Sbjct: 512 LSWSKSQLLLSSSMDKTVRLWDI-ETKTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAK 570
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/65 (36%), Positives = 32/65 (49%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L S SWD+T+++W +A K H V SV S + SGS D T+K W
Sbjct: 220 LLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV-STTEAIVFSGSADGTVKAWKRDQ 278
Query: 432 ECKYT 446
+ KYT
Sbjct: 279 QGKYT 283
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 476 VMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 655
V C L Q ++ S WDRT+KVW + + K + H +N+V VS ++ SG
Sbjct: 209 VSCLSLNDE-QGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV-VSTTEAIVFSGS 266
Query: 656 KD 661
D
Sbjct: 267 AD 268
Score = 28.3 bits (60), Expect = 5.8
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 11/97 (11%)
Frame = +3
Query: 162 QRRKQLRYTSKAFIRSFALHF*CCAV**R*LALSGSWDKTLRLWDLAAGKTT--RRFEDH 335
+R KQL Y ++ L C V L SGS DKT+ +W T H
Sbjct: 323 EREKQLNYGG--ILKGHKLAVLCLEVAGS-LVFSGSADKTICVWKRDGNIHTCLSVLTGH 379
Query: 336 TKDVLSVAFSVDNRQ---------IVSGSRDKTIKLW 419
T V +A D + SGS DK++K+W
Sbjct: 380 TGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVW 416
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
+GS D+T+++WD+A G H + V +A S + + S DK +K W+ L + K
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWD-LEQNK 251
Query: 441 YTIQDDGHSDWVSCVRFSP 497
GH V C+ P
Sbjct: 252 VIRSYHGHLSGVYCLALHP 270
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L+G D R+WD+ H V SV + Q+V+GS D TIK W+
Sbjct: 276 LTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWD 330
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 413
++GS D T++ WDL GKT H K V ++ S S D T K
Sbjct: 318 VTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK 369
Score = 35.5 bits (78), Expect = 0.038
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +3
Query: 300 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVS 479
A K R + H V SVAF N +GS D+TIK+W+ +A + GH + V
Sbjct: 164 APWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD-VATGVLKLTLTGHIEQVR 222
Query: 480 CVRFSPNH 503
+ S H
Sbjct: 223 GLAVSNRH 230
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +2
Query: 479 MCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGK 658
+C + T+ P +V+ D T+K W L K H + +T+ P + AS
Sbjct: 305 VCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASA 364
Query: 659 D 661
D
Sbjct: 365 D 365
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 234
++GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 172 IQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLA 225
Query: 235 LSS 243
+S+
Sbjct: 226 VSN 228
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 533 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
DRT+K+W + LK+ GH + + VS + S G D
Sbjct: 197 DRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDD 239
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 521 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
S G D+ VK W L K+ ++ GH + + + P + +GG+D
Sbjct: 235 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRD 281
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/81 (30%), Positives = 42/81 (51%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+S ++D+T++LWDL G T T + ++ S+D + SG D ++LW+ +
Sbjct: 332 VSAAYDRTIKLWDLHKGYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRLWD-IQTG 389
Query: 438 KYTIQDDGHSDWVSCVRFSPN 500
K + GHS V+ V S N
Sbjct: 390 KLLSEVAGHSSAVTSVSLSRN 410
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAEC 437
SG D LRLWD+ GK H+ V SV+ S + +I++ RD +++T E
Sbjct: 374 SGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEI 433
Query: 438 KYTIQDDGH---SDWV-SCV 485
T++ G+ S+W SC+
Sbjct: 434 CGTLRASGNRLASNWSRSCI 453
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAEC 437
+G D+ +++WD +G + ++L +A + DN+ +++ + + +W+ +
Sbjct: 248 TGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRV 307
Query: 438 KYTIQDDGHSDWVSCV---RFSPNHANPLSY 521
++T+ GH+D V V +FS H +Y
Sbjct: 308 RHTL--TGHTDKVCAVDVSKFSSRHVVSAAY 336
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 422
++ + L +WD+++G+ HT V +V S +R +VS + D+TIKLW+
Sbjct: 289 IAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWD 344
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 482 CQILTQSCQPIIVSCG-WDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGK 658
C + S + V G D +++W + KL GHS + +V++S +G+ + G+
Sbjct: 360 CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGR 419
Query: 659 D 661
D
Sbjct: 420 D 420
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+VS +DRT+K+W L + N + + N + +S DG SG D
Sbjct: 331 VVSAAYDRTIKLWDL-HKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMD 378
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTL 428
L LS S DKT+RLWD+ + F H V V F+ +D +SGS D I++WN
Sbjct: 532 LLLSSSMDKTVRLWDIETQSCLKLFA-HNDYVTCVQFNPLDEDYFISGSLDAKIRIWN-- 588
Query: 429 AECKYTIQDDGHSDWVSCVRFSPN 500
+ ++ + + V+ V ++P+
Sbjct: 589 ISNRQVVEWNDLKEMVTAVCYTPD 612
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 491 LTQSCQPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDM 664
L+ S +++S D+TV++W + T LK+ H+ Y+ V +P D SG D
Sbjct: 525 LSWSRSQLLLSSSMDKTVRLWDIETQSCLKL--FAHNDYVTCVQFNPLDEDYFISGSLDA 582
Query: 665 K 667
K
Sbjct: 583 K 583
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 162
L HN +VT + NP D +S S D + +W ++
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS 590
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-L 428
+ +SG +K LR+WD G + + HT +V + R +SGS D I+LW+
Sbjct: 227 MLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQ 286
Query: 429 AECKYTIQDDGHSDWVSCVRFSPNH 503
C +T S W S +H
Sbjct: 287 QRCLHTYAVHTDSVWALACNPSFSH 311
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Frame = +3
Query: 261 SGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 434
+GS D TL+ W D A + FE H V A + ++ +VS S D T+K W+ L++
Sbjct: 57 TGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTTVKTWDGLSD 115
Query: 435 --CKYTIQDDGHSDWVSCVRFSPNHANPLSYPVVGTEL 542
C T++ HSD+V+C+ + + N ++ +G E+
Sbjct: 116 GVCTRTLRQ--HSDYVTCLAVAAKNNNVVASGGLGGEV 151
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 416
LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 342 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVS 479
DVL + S D + +GSRD T+K W + + + + H DWV+
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVN 88
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
++VS G ++ ++VW + GH+ + + + G C SG D
Sbjct: 227 MLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSD 276
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +3
Query: 306 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 470
G T + H + V ++A + +VSG +K +++W+ K +++ GH+D
Sbjct: 203 GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTD 256
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-L 428
+ +SG +K LR+WD G + + HT +V + R +SGS D I+LW+
Sbjct: 227 MLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQ 286
Query: 429 AECKYTIQDDGHSDWVSCVRFSPNH 503
C +T S W S +H
Sbjct: 287 QRCLHTYAVHTDSVWALACNPSFSH 311
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Frame = +3
Query: 261 SGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 434
+GS D TL+ W D A + FE H V A + ++ +VS S D T+K W+ L++
Sbjct: 57 TGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTTVKTWDGLSD 115
Query: 435 --CKYTIQDDGHSDWVSCVRFSPNHANPLSYPVVGTEL 542
C T++ HSD+V+C+ + + N ++ +G E+
Sbjct: 116 GVCTRTLRQ--HSDYVTCLAVAAKNNNVVASGGLGGEV 151
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 416
LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 342 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVS 479
DVL + S D + +GSRD T+K W + + + + H DWV+
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVN 88
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
++VS G ++ ++VW + GH+ + + + G C SG D
Sbjct: 227 MLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSD 276
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +3
Query: 306 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 470
G T + H + V ++A + +VSG +K +++W+ K +++ GH+D
Sbjct: 203 GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTD 256
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 282 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 458
++LWD G RF++H V V F VSG D IK+WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLL-- 90
Query: 459 GHSDWVSCVRF 491
GH D++ V+F
Sbjct: 91 GHLDYIRTVQF 101
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L +SG D +++W+ + H + +V F + IVS S D+TI++WN +
Sbjct: 65 LFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
Query: 432 ECKYTIQDDGHSDWVSCVRFSP 497
++ GH+ +V C F P
Sbjct: 125 RTCVSVL-TGHNHYVMCASFHP 145
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L +SG+ D+ ++LW + K H +V SV F IVS S DK+I++W+
Sbjct: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+S S D+T+R+W+ + H V+ +F +VS S D+T+++W+ A
Sbjct: 109 VSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
Query: 438 KYTI 449
K T+
Sbjct: 169 KKTV 172
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 506 QPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 616
QP+ VS G D +KVW+ N + LGH Y+ TV
Sbjct: 63 QPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTV 99
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 22 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 165
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 159
L GHN +V + +PK D+++S+S D+T+ VW +
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDI 164
Score = 29.5 bits (63), Expect(2) = 0.025
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 327 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRF 491
E H + V AF IVSG+ D+ +KLW + E K D GH + VS V F
Sbjct: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMF 256
Score = 25.4 bits (53), Expect(2) = 0.025
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAA 305
L +S S D+T+R+WD+ A
Sbjct: 149 LVVSASLDQTVRVWDIGA 166
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+SG D +R+WD GK ++ ++ H + + S+ + D+ ++GS DKT KLW+
Sbjct: 191 VSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWD 248
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L S + D T +W G+ + H+ V S D+ ++++GS D+T KLW+
Sbjct: 51 LLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWD 107
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
++ SC D T VW N + + GHSG + +S D S +G D
Sbjct: 51 LLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSAD 100
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 590 GHSGYLNTVTVSPDGSLCASGGKD 661
GH G +N + SPDG +SGG+D
Sbjct: 315 GHFGPINALAFSPDGKSFSSGGED 338
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 386
++GS D+T +LWD+ +GK F+ SV FSV + V
Sbjct: 95 ITGSADQTAKLWDVKSGKELFTFK-FGAPARSVDFSVGDHLAV 136
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/82 (26%), Positives = 44/82 (53%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 452
D LR++D + K + + +L A+S+D + +++G D +++W+ + + K
Sbjct: 324 DGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWS-MEDRKVVAW 382
Query: 453 DDGHSDWVSCVRFSPNHANPLS 518
+GH+ WVS V F ++P S
Sbjct: 383 GEGHNSWVSGVAFDSYWSSPNS 404
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
+ S DKT+++W++ K + H + V FSVD +V+ S D T +LW+ A +
Sbjct: 228 TASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKE 287
Query: 441 YTIQDDGHSDWVSC 482
+ H V C
Sbjct: 288 VKVYQGHHKATVCC 301
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAG--KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L+ + + +RL+D+ + + ++ HT +V++V F D + + SGS D T+K+W+ A
Sbjct: 50 LAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRA 109
Score = 36.3 bits (80), Expect = 0.022
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Frame = +3
Query: 279 TLRLWDLAAGKTT-------RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
T +W L GK T + + H +L S N+ + + S DKT+K+WN +
Sbjct: 185 TCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWN-VDGF 243
Query: 438 KYTIQDDGHSDWV-SCV 485
K GH WV CV
Sbjct: 244 KLEKVLTGHQRWVWDCV 260
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
SGS D T+++WDL A + +E V +V + +++SG ++ I++W+ A
Sbjct: 95 SGSEDGTVKIWDLRAPGCQKEYES-VAAVNTVVLHPNQTELISGDQNGNIRVWDLRA 150
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 234
L+ HNG + + +P + +SS DKT+ +W + + + + +K L GH ++ D V
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASS-DKTVKIWNV----DGFKL-EKVLTGHQRWVWDCV 260
Query: 235 LSSDG 249
S DG
Sbjct: 261 FSVDG 265
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +2
Query: 473 GVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 652
G + + L + + D+TVK+W++ KL+ GH ++ S DG +
Sbjct: 212 GHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTA 271
Query: 653 GKDM 664
DM
Sbjct: 272 SSDM 275
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 359
++ S D T RLW + AGK + ++ H K + A
Sbjct: 269 VTASSDMTARLWSMPAGKEVKVYQGHHKATVCCA 302
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/84 (28%), Positives = 45/84 (53%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L +SG D+ ++LWD +G+ H VLSV ++ + +++ S+D+ IKL++ +
Sbjct: 282 LLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYD-IR 340
Query: 432 ECKYTIQDDGHSDWVSCVRFSPNH 503
K GH+ V+ + + P H
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCH 364
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 500
H DV SV + +VSG +D+ +KLW+T + + GH + V V+++ N
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSG-RELCSLHGHKNIVLSVKWNQN 321
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 34 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 189
T+K + RGH VT +A +P + + +S S D ++ W + + IP
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIP 392
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 452
D +RL+D+ K R F HT + + FS D + ++S S D ++++W+ + +
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQI--- 592
Query: 453 DDGHSDW-VSCVRFSPN 500
D H D ++ + SPN
Sbjct: 593 DGVHVDVPITALSLSPN 609
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
+GS D+T+++WD+A G H V +A S + + S DK +K W+ L + K
Sbjct: 187 TGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWD-LEQNK 245
Query: 441 YTIQDDGHSDWVSCVRFSP 497
GH V C+ P
Sbjct: 246 VIRSYHGHLHGVYCLALHP 264
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+ L+G D R+WD+ K H DV SV + Q+++GS D TIK W+
Sbjct: 268 VVLTGGRDSVCRVWDIRT-KMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWD 323
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 413
++GS D T++ WDL GK+ +H K V ++A VS S D K
Sbjct: 311 ITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKK 362
Score = 34.3 bits (75), Expect = 0.088
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 300 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
A K R + H V SVAF N +GS D+TIK+W+
Sbjct: 158 APWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 198
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 533 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
DRT+K+W + LK+ GH G + + VS + S G D
Sbjct: 191 DRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDD 233
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 234
L+GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 166 LQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIGQVRGLA 219
Query: 235 LSS 243
+S+
Sbjct: 220 VSN 222
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +2
Query: 461 TQRLGVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 640
T +G + + + + S G D+ VK W L K+ ++ GH + + + P +
Sbjct: 209 TGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDV 268
Query: 641 CASGGKD 661
+GG+D
Sbjct: 269 VLTGGRD 275
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAE 434
LS S D+T+RLW + + R F H V VAF+ VD+ +SGS D +++W+ +
Sbjct: 337 LSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTR 394
Query: 435 CKYTIQDDGHSDWVSCVRFSPN 500
C+ D D V+ V + P+
Sbjct: 395 CRVVDYTD-IRDIVTAVCYRPD 415
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 64 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 165
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAE 434
LS S D+T+RLW + + R F H V VAF+ VD+ +SGS D +++W+ +
Sbjct: 337 LSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTR 394
Query: 435 CKYTIQDDGHSDWVSCVRFSPN 500
C+ D D V+ V + P+
Sbjct: 395 CRVVDYTD-IRDIVTAVCYRPD 415
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 64 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 165
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
+G D+ + +WD+ + + F H V + F ++ SGS D+T+K+WN + +
Sbjct: 239 TGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWN-VEDKA 297
Query: 441 YTIQDDGH 464
+ ++ GH
Sbjct: 298 FITENHGH 305
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
SGS+D+T+++W++ H ++L++ R + G RD+T+ L++ + E
Sbjct: 281 SGSFDRTVKVWNVEDKAFITENHGHQGEILAIDALRKERALTVG-RDRTM-LYHKVPEST 338
Query: 441 YTIQDDGHSDWVSCVRFSPN 500
I S SC S N
Sbjct: 339 RMIYRAPASSLESCCFISDN 358
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
H + V+SVA S D+ + S S+D TI W+
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWD 189
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
SGS D + + D A GKT HT VLSV S D I +GS D+T++LW+ +
Sbjct: 218 SGSDDGHVNMHD-AEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWD--LKM 274
Query: 438 KYTIQD-DGHSDWVSCVRFSP 497
+ IQ H+D V V F P
Sbjct: 275 RAAIQTMSNHNDQVWSVAFRP 295
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 28 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 159
+E L G++ GH WV + +P I + S D+T+ +W L
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 494 TQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
T+ ++++ D TVK+W L + GHS + + P G + AS D
Sbjct: 26 TEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSID 81
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAEC 437
S S D TLR+WD+ +T H ++LS ++ D+ + + S DKT+K+W+ +
Sbjct: 167 SASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYR 226
Query: 438 KYTIQDDGHSDWVSCVRFSPN 500
+GH V V+FSP+
Sbjct: 227 VPLAVLNGHGYAVRKVKFSPH 247
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWN 422
L+ SWD T++LW + + R F++H V ++ + + S S D T+++W+
Sbjct: 123 LTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWD 178
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 52 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 189
T + H V Q NPK+ D+ S+S D TL +W + + IP
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP 189
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDM 664
I+ + D+TVKVW + + ++ + L GY + V SP SL AS DM
Sbjct: 207 ILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDM 259
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
+SGS D + +W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 87 VSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +1
Query: 40 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 219
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 220 I 222
+
Sbjct: 69 V 69
Score = 34.7 bits (76), Expect = 0.066
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+S S D+TL+ W G+ ++ H + +V + + ++VSGS D ++KLW +
Sbjct: 127 VSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKLW----KG 179
Query: 438 KYTIQD-DGHSDWVSCVRFSPN 500
K ++Q GH+D V + P+
Sbjct: 180 KTSLQTLSGHTDTVRGLAVMPD 201
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
+SGS D + +W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 87 VSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +1
Query: 40 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 219
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 220 I 222
+
Sbjct: 69 V 69
Score = 34.7 bits (76), Expect = 0.066
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+S S D+TL+ W G+ ++ H + +V + + ++VSGS D ++KLW +
Sbjct: 127 VSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKLW----KG 179
Query: 438 KYTIQD-DGHSDWVSCVRFSPN 500
K ++Q GH+D V + P+
Sbjct: 180 KTSLQTLSGHTDTVRGLAVMPD 201
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAEC 437
S +D +++WD G+ ++ +H K SV FS D + VSGS D ++KLW ++ E
Sbjct: 783 STDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLW-SINE- 840
Query: 438 KYTIQDDGHSDWVSCVRFSPNHANPL 515
K ++ V CV+FS +++N L
Sbjct: 841 KRSLGTIWSPANVCCVQFS-SYSNHL 865
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
GS D + +DL KT H K V V F +D+ IVS S D ++KLWN
Sbjct: 869 GSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKF-MDSETIVSASTDNSLKLWN 921
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 270 WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYT 446
WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+ E C+
Sbjct: 98 WDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGL 157
Query: 447 IQDDG 461
++ G
Sbjct: 158 LRVQG 162
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 270 WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYT 446
WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+ E C+
Sbjct: 95 WDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGL 154
Query: 447 IQDDG 461
++ G
Sbjct: 155 LRVQG 159
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 309 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCV 485
K F HT +VL +++S DN ++S S DKT++LW + +C H+ +V+ V
Sbjct: 319 KPLYEFRGHTGEVLDISWSKDN-YLLSASMDKTVRLWKVGSNDCLGVF---AHNSYVTSV 374
Query: 486 RFSPNHAN 509
+F+P + N
Sbjct: 375 QFNPVNEN 382
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAE 434
LS S DKT+RLW + + F H V SV F+ V+ +SGS D +++WN ++
Sbjct: 343 LSASMDKTVRLWKVGSNDCLGVFA-HNSYVTSVQFNPVNENYFMSGSIDGKVRIWN-ISG 400
Query: 435 CKYTIQDDGHSDWVSCVRFSPN 500
C D D +S V + P+
Sbjct: 401 CSVVDWAD-LKDIISAVCYRPD 421
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 58 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 159
RGH G V I+ + + +LS+S DKT+ +WK+
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKV 356
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
L S SWD+TL++W K F + D ++ +N I +GS D+ IK+W
Sbjct: 179 LLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIYTGSSDQRIKVW 234
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 458 WTQRLGVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDG 634
W + + + ++ S WDRT+K+W T+ K L+ H +N V +S +G
Sbjct: 161 WVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENG 220
Query: 635 SLCASGGKDMK 667
+ +G D +
Sbjct: 221 DI-YTGSSDQR 230
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGK---TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
SG D ++ +W+ G HT+ VL +A D + SGS DKT++LW A
Sbjct: 277 SGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDI--LCSGSADKTVRLWKCSA 334
Query: 432 -ECKYTIQDDGHSDWVSCV 485
+ +GH V C+
Sbjct: 335 KDYSCLAMLEGHLGPVKCL 353
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPN 500
H V +A S D + S S D+T+K+W T +C + + H D ++ V S N
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESF-TNAHDDAINAVALSEN 219
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
++GS D+ +++W + H D+ +A S +N I S S D I++W
Sbjct: 261 ITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGL 320
Query: 438 KYTIQDDGHSDWVSCVRFSPNHANP 512
++ GH+ V+ + FSP +P
Sbjct: 321 PVSVLR-GHTGAVTAIAFSPRPGSP 344
Score = 34.7 bits (76), Expect = 0.066
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 467 RLGVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 646
R V C IL +S + +I DR VKVW + + GH G + + VS + A
Sbjct: 245 RNAVYCAILDRSGRYVITGSD-DRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIA 303
Query: 647 SGGKD 661
S D
Sbjct: 304 SASND 308
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVW 153
LRGH G VT IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV---DNRQIVSGSRDKTIKLWN 422
S S D +R+W L G HT V ++AFS Q++S S D T ++W+
Sbjct: 304 SASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWD 360
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +3
Query: 282 LRLWDLAAG-KTTRRFEDH--TKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTI 449
+ LWDLA K +F H +K V+ F +D+ I SGS D + +WN L K
Sbjct: 421 IHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWN-LKNTKPLE 479
Query: 450 QDDGHSDWVSCVRFSPNHANPLS 518
GHS V+CV ++P + L+
Sbjct: 480 VLSGHSMTVNCVSWNPKNPRMLA 502
Score = 35.1 bits (77), Expect = 0.050
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLW 419
SGS D + +W+L K H+ V V+++ N R + S S D+TI++W
Sbjct: 460 SGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 34.3 bits (75), Expect = 0.088
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 153
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+W+
Sbjct: 522 LLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 581
Query: 432 ECKYTIQDDGHSDWVSCVRFSP 497
+ GH+ V + F P
Sbjct: 582 PGYFLRTISGHAAPVMSIDFHP 603
Score = 31.1 bits (67), Expect = 0.82
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 473 GVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCAS 649
G Q+ Q ++ + TV ++ + N ++N GHS +++V SP+G L AS
Sbjct: 633 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 692
Query: 650 GGKD 661
+D
Sbjct: 693 VSED 696
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 452
+ ++LW L++G + SV F ++ + I+LWNT+ T+
Sbjct: 695 EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA 754
Query: 453 DDGHSDWVSCVRFSPN 500
GH +S + SP+
Sbjct: 755 --GHECVISALAQSPS 768
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+W+
Sbjct: 524 LLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 583
Query: 432 ECKYTIQDDGHSDWVSCVRFSP 497
+ GH+ V + F P
Sbjct: 584 PGYFLRTISGHAAPVMSIDFHP 605
Score = 31.1 bits (67), Expect = 0.82
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 473 GVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCAS 649
G Q+ Q ++ + TV ++ + N ++N GHS +++V SP+G L AS
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 650 GGKD 661
+D
Sbjct: 695 VSED 698
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 452
+ ++LW L++G + SV F ++ + I+LWNT+ T+
Sbjct: 697 EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA 756
Query: 453 DDGHSDWVSCVRFSPN 500
GH +S + SP+
Sbjct: 757 --GHECVISALAQSPS 770
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+W+
Sbjct: 524 LLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 583
Query: 432 ECKYTIQDDGHSDWVSCVRFSP 497
+ GH+ V + F P
Sbjct: 584 PGYFLRTISGHAAPVMSIDFHP 605
Score = 31.1 bits (67), Expect = 0.82
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 473 GVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCAS 649
G Q+ Q ++ + TV ++ + N ++N GHS +++V SP+G L AS
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 650 GGKD 661
+D
Sbjct: 695 VSED 698
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 452
+ ++LW L++G + SV F ++ + I+LWNT+ T+
Sbjct: 697 EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA 756
Query: 453 DDGHSDWVSCVRFSPN 500
GH +S + SP+
Sbjct: 757 --GHECVISALAQSPS 770
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+W+
Sbjct: 524 LLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 583
Query: 432 ECKYTIQDDGHSDWVSCVRFSP 497
+ GH+ V + F P
Sbjct: 584 PGYFLRTISGHAAPVMSIDFHP 605
Score = 31.1 bits (67), Expect = 0.82
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 473 GVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCAS 649
G Q+ Q ++ + TV ++ + N ++N GHS +++V SP+G L AS
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 650 GGKD 661
+D
Sbjct: 695 VSED 698
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 452
+ ++LW L++G + SV F ++ + I+LWNT+ T+
Sbjct: 697 EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA 756
Query: 453 DDGHSDWVSCVRFSPN 500
GH +S + SP+
Sbjct: 757 --GHECVISALAQSPS 770
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+W+
Sbjct: 524 LLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASD 583
Query: 432 ECKYTIQDDGHSDWVSCVRFSP 497
+ GH+ V + F P
Sbjct: 584 PGYFLRTISGHAAPVMSIDFHP 605
Score = 31.1 bits (67), Expect = 0.82
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 473 GVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCAS 649
G Q+ Q ++ + TV ++ + N ++N GHS +++V SP+G L AS
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 650 GGKD 661
+D
Sbjct: 695 VSED 698
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 452
+ ++LW L++G + SV F ++ + I+LWNT+ T+
Sbjct: 697 EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA 756
Query: 453 DDGHSDWVSCVRFSPN 500
GH +S + SP+
Sbjct: 757 --GHECVISALAQSPS 770
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
+G D T L+D +G+ H+K V S+ F D +++ S DKT+++W +
Sbjct: 239 TGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGN 298
Query: 441 YT 446
YT
Sbjct: 299 YT 300
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAA-GKTTRR--FEDHTKDVLSVAFSVDNRQIVSGSRDKT 407
L L+ S DKT+R+W + G T R +DH+ +V +V N+ VS S D T
Sbjct: 278 LVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDST 332
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 40 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 174
++ TL GH+ VT I D++L++S DKT+ +W + D N
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSEDGN 298
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +3
Query: 315 TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD---DGHSDWVSCV 485
+R ++ H K V SVA++ + ++ SGS D+T ++WN +D GH+D V +
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 486 RFSPNHAN 509
+ P H++
Sbjct: 73 CWDPKHSD 80
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 416
L + S DK++RLWD +GK T++ E +++ ++ + D + G+RD + +
Sbjct: 81 LVATASGDKSVRLWDARSGKCTQQVELSGENI-NITYKPDGTHVAVGNRDDELTI 134
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 153
L+GH V Q+ +PK+ D++ ++S DK++ +W
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLW 94
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTR----RFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNT 425
SGS D+T R+W++ ++ + HT V + + + +V + S DK+++LW+
Sbjct: 37 SGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDA 96
Query: 426 LA-ECKYTIQDDGHS 467
+ +C ++ G +
Sbjct: 97 RSGKCTQQVELSGEN 111
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 422
LS S D+T+RLW + + R H V VAF+ VD+ +SGS D +++W+
Sbjct: 378 LSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWD 433
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L S SWD T+++W +A K H + SV D+ + +GS D T+K+W
Sbjct: 249 LLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDD-LVFTGSADGTVKVWKREL 307
Query: 432 ECKYT 446
+ K T
Sbjct: 308 QGKGT 312
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
++ S WD T+KVW + + K + H +N+V +S L +G D
Sbjct: 249 LLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV-MSGFDDLVFTGSAD 297
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 41.5 bits (93), Expect = 6e-04
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Frame = +3
Query: 123 FLSRQNSHRVEADQR----RKQLRYTSKAFIRSFALHF*CC--AV**R*LALSGSWDKTL 284
FLS+++ + +A R K +T +R+ CC + + LA +G DK
Sbjct: 617 FLSQEDGDQRDAVTRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGH-DKKA 675
Query: 285 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQD-D 458
LW K E+HT + + FS ++ + S DKT+++W+ A+ K Y+++
Sbjct: 676 VLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWD--ADNKGYSLRTFM 733
Query: 459 GHSDWVSCVRFSP 497
GHS V+ + F P
Sbjct: 734 GHSSMVTSLDFHP 746
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L SGSWDKT ++W ++ + H +D ++ S + + +GS D T+K+W
Sbjct: 225 LLYSGSWDKTFKVWRVSDLRCVESVNAH-EDAVNAVVSGFDGLVFTGSADGTVKVWRRED 283
Query: 432 ECKYT 446
+ K T
Sbjct: 284 QAKDT 288
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 485
H + +A S D R + SGS DKT K+W +++ + + H D V+ V
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWR-VSDLRCVESVNAHEDAVNAV 259
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 476 VMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 655
+ C L++ + ++ S WD+T KVW +++ + + H +N V DG L +G
Sbjct: 214 ISCLALSED-KRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDG-LVFTGS 271
Query: 656 KD 661
D
Sbjct: 272 AD 273
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
+ S DKT+++W+L K + H + V FS+D +V+ S D T +LW+ A
Sbjct: 234 TASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRA 290
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +3
Query: 282 LRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECK 440
+RL+DL + R F HTK+V++V F + SGS D ++K+W+ + EC+
Sbjct: 63 IRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQ 119
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 434
SGS D ++++WDL + R F V +V + +++SG ++ I++W+ A+
Sbjct: 101 SGSEDGSVKIWDLRVRECQREFRS-VSPVNTVVLHPNQTELISGDQNGNIRVWDLRAD 157
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 321 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 494
+ + H +L S N+ + + S DKT+K+WN L K GH WV FS
Sbjct: 212 KLQAHNSHILKCLLSPGNKYLATASSDKTVKIWN-LDGFKLEKVLTGHERWVWDCDFS 268
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 533 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
D+TVK+W+L KL+ GH ++ S DG + D
Sbjct: 238 DKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSD 280
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
D+ + WD++ G+ R+F H +V +V F+ + +VS D+++++W+
Sbjct: 81 DRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/80 (26%), Positives = 42/80 (52%)
Frame = +3
Query: 255 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 434
AL+ D+T+RLW+ G + ++ H ++V V + DN + S D+ + W+ ++
Sbjct: 33 ALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWD-VST 91
Query: 435 CKYTIQDDGHSDWVSCVRFS 494
+ + GH V+ V+F+
Sbjct: 92 GRVIRKFRGHDGEVNAVKFN 111
Score = 34.3 bits (75), Expect = 0.088
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 521 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
SCG DR V W ++ ++ GH G +N V + S+ S G D
Sbjct: 77 SCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFD 123
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 40 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 156
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 518 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGG 655
++CG DRT+++W+ L + H + V V+ D + C+ GG
Sbjct: 34 LTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGG 80
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 309 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
K + H VL+ F+ D ++ +D+TI+LWN
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +3
Query: 246 R*LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 416
R + S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+ L
Sbjct: 246 RNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVL 303
Score = 35.5 bits (78), Expect = 0.038
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLWN 422
L +GS D+T++LWDL+ + + + + +AFS DN +++ G +KLW+
Sbjct: 384 LLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWD 443
Query: 423 TLAE 434
TL++
Sbjct: 444 TLSD 447
Score = 34.7 bits (76), Expect = 0.066
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +1
Query: 52 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 171
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNE 403
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 533 DRTVKVWHLTNCKLK--INHLGHSGYLNTVTVSPDGS-LCASGG 655
DRTVK+W L+N + H ++G L + SPD L A GG
Sbjct: 391 DRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGG 434
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
SGS D + LWD+ R H V + F +++VS S+DK +++W+ +
Sbjct: 123 SGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHC 182
Query: 441 YTIQDDGHSD 470
I HS+
Sbjct: 183 MQIVSGHHSE 192
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L G D ++R+WD G F H V ++ ++ + SGS+D I LW+ +
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVG 137
Query: 432 ECKYTIQDDGHSDWVSCVRF 491
E + GH D V+ + F
Sbjct: 138 E-SGLFRLRGHRDQVTDLVF 156
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTI 449
D T++++ + + K H V+ + S D IV+GS+DK +K+W +C +I
Sbjct: 561 DSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSI 620
Query: 450 QDDGHSDWVSCVRFSPN 500
H D V V+F N
Sbjct: 621 --FAHGDSVMGVKFVRN 635
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +2
Query: 515 IVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD---MKGDVVG 682
+V+ G+ D ++++W ++N H G + + + GS+ ASG KD + DVVG
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVG 137
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 533 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
D TVKV+++ + K ++ GH + + +S DG L +G +D
Sbjct: 561 DSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQD 603
Score = 31.9 bits (69), Expect = 0.47
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 64 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 243
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFLD 158
Query: 244 DG 249
G
Sbjct: 159 GG 160
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 434
D+ ++ WD + E H ++ +A S +V+GS D++++ W+ E
Sbjct: 645 DRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSEE 698
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 342 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 494
DVL+VA S D + I D T+K++ + K+ + GH V C+ S
Sbjct: 542 DVLAVAISPDAKHIAVALLDSTVKVF-YMDSLKFYLSLYGHKLPVMCIDIS 591
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
SGS D T+ +W++ G T H V V + I S S DKT+ +W T ++
Sbjct: 135 SGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRT-SDWG 193
Query: 441 YTIQDDGH 464
+ DGH
Sbjct: 194 MAHRTDGH 201
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 294 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 473
D+ K HT DV+ + +S D+ + SGS D T+ +WN T+ GH
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVL-RGHLSL 162
Query: 474 VSCVRFSP 497
V V + P
Sbjct: 163 VKGVTWDP 170
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 156
LRGH V + +P I S S DKT+I+W+
Sbjct: 156 LRGHLSLVKGVTWDP-IGSFIASQSDDKTVIIWR 188
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 246 R*LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTI 410
R + S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+
Sbjct: 278 RNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTV 333
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLWN 422
L +GS DK+++LWDL+ + + + + V S++F+VDN +++ G + +W+
Sbjct: 419 LLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGELHVWD 478
Query: 423 TLAE 434
TL +
Sbjct: 479 TLLD 482
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
SGS DK++ D+ + + + H ++ + +S DNR++ SG D + +WN
Sbjct: 266 SGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQ-HST 324
Query: 438 KYTIQDDGHSDWVSCVRFSPNH 503
+ ++ H+ V + +SP+H
Sbjct: 325 QPVLRFCEHAAAVKAIAWSPHH 346
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/80 (26%), Positives = 42/80 (52%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 443
G+ T+++WD+ K R E H V ++A+S + + SGSRDK+I + + +
Sbjct: 227 GTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDIRTQEDH 284
Query: 444 TIQDDGHSDWVSCVRFSPNH 503
+ GH + +++S ++
Sbjct: 285 VSKLKGHKSEICGLKWSSDN 304
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 421 HSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 456
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLWN 422
++GS D ++ ++DL A + + R HT DV +V F+ ++ I+SGS D K+W+
Sbjct: 245 VAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWD 300
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +3
Query: 252 LALSGSWDKTLRLWD----LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
L LSGS D ++WD + K H + V + D R +S +D+TIKLW
Sbjct: 286 LILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLW 345
Query: 420 N 422
+
Sbjct: 346 D 346
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 318 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFS 494
++ H+KDV FS +N+ I S S DKTI++W + C I G S C+RF
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIY--GISPQY-CIRFH 266
Query: 495 PNHANPLSYPVVGTELS 545
P + N LS EL+
Sbjct: 267 PVNNNFLSAGNANKELT 283
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
S S DKT+R+W+L+ G R + V+N + +G+ +K + ++N
Sbjct: 233 SSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVNNNFLSAGNANKELTVFN 286
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +1
Query: 55 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTR 165
L GH+ VT ++N +Y I SSS DKT+ VW+L+R
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR 247
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 422
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
GS D + +DL K H K V V F VD+ +VS S D T+KLW+
Sbjct: 637 GSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLWD 689
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 422
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
GS D + +DL K H K V V F VD+ +VS S D T+KLW+
Sbjct: 637 GSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLWD 689
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
SGSWDKTL++W L+ K + H D ++ + D R + S S D +K+W
Sbjct: 189 SGSWDKTLKVWRLSDLKCLESIKAH-DDAINGLVAGDGR-VYSASADGKVKIW 239
Score = 34.7 bits (76), Expect = 0.066
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKGDVVGSER 691
II S WD+T+KVW L++ K + H +N + V+ DG + S D K + G E+
Sbjct: 186 IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGL-VAGDGRV-YSASADGKVKIWGKEK 243
Score = 34.7 bits (76), Expect = 0.066
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 324 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN---TLAECKYTIQDDGHSDWVSCVRFS 494
FE ++ + V + SGS DK+I LW T CK+ + GH V C++ S
Sbjct: 312 FETRGHNMAVLCMCVVGEMVCSGSADKSIGLWRREVTGMLCKFGV-IHGHEGPVKCLQAS 370
Query: 495 PNH 503
PN+
Sbjct: 371 PNN 373
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 422
L+ S D+T+++WD+ K T HT V S+ N +VSGSRD LW+
Sbjct: 144 LTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 31 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 159
E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKD 661
+++ D+T+KVW + K +GH+G + ++ P S L SG +D
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRD 192
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TL 428
LA +G D +WD+ +GK + + HTK + S+ D +++GS D T ++W+ +
Sbjct: 995 LAAAGR-DTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSR 1051
Query: 429 AECKYTIQDDGHSDWVSCVRFSP 497
C + H+ V V +SP
Sbjct: 1052 GSCDAVLA--CHAGPVQSVEYSP 1072
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 258 LSGSWDKTLRLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
+SGS D +++WD L + + HT V ++ S D +IVSGS D ++ +W+
Sbjct: 871 ISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDK-Q 927
Query: 432 ECKYTIQDDGHSDWVSCVR 488
+ + GH VSCV+
Sbjct: 928 TTQLLEELKGHDSQVSCVK 946
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 40 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 153
+LR TL+GH G V I+++ I+S S D ++IVW
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW 924
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Frame = +3
Query: 273 DKTLRLWDL---AAGKTTRRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLWN--TLAE 434
D+ L +WDL +A K + H+ +V +AF+ N +V+ GS DKT+KL++ L+
Sbjct: 249 DQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLST 308
Query: 435 CKYTIQDDGHSDWVSCVRFSPNHANPLSYPVVGTEL 542
+T D H + V V ++P + L+ +G L
Sbjct: 309 ALHTF--DSHKEEVFQVGWNPKNETILASCCLGRRL 342
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 52 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 165
T H V Q+ NPK ++ S + L+VW L+R
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = +3
Query: 309 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 488
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 489 FSP 497
F+P
Sbjct: 404 FNP 406
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAE 434
LS S D ++RLW + F H V SV F+ VD+ +SGS D +++W+ ++
Sbjct: 371 LSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSA-SQ 428
Query: 435 CKYTIQDDGHSDWVSCVRFSPN 500
C+ D V+ V + P+
Sbjct: 429 CQVVDWADARG-IVTAVCYQPD 449
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 64 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 165
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = +3
Query: 309 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 488
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 489 FSP 497
F+P
Sbjct: 404 FNP 406
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAE 434
LS S D ++RLW + F H V SV F+ VD+ +SGS D +++W+ ++
Sbjct: 371 LSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSA-SQ 428
Query: 435 CKYTIQDDGHSDWVSCVRFSPN 500
C+ D V+ V + P+
Sbjct: 429 CQVVDWADARG-IVTAVCYQPD 449
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 64 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 165
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
SGS DKT+++WDL + + HT V S+ ++ ++S S D TIK+W
Sbjct: 273 SGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLL--CWDKCLISSSLDGTIKVW 323
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3
Query: 327 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQ 452
E H+ +V F+V + + SGS DKTIK+W NTL +C T++
Sbjct: 255 EGHSGEV--TCFAVGGQMLYSGSVDKTIKMWDLNTL-QCIMTLK 295
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 28 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 159
S+ K +L GH+G VT A + M+ S S DKT+ +W L
Sbjct: 245 SDPFKYLTSLEGHSGEVTCFAVGGQ---MLYSGSVDKTIKMWDL 285
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
S SWDKTL++W + + + H V ++A S N + +GS D+ I++W
Sbjct: 210 SVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVST-NGTVYTGSADRRIRVW 261
Score = 36.3 bits (80), Expect = 0.022
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 640
I S WD+T+K+W ++ + K + H +N + VS +G++
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTV 249
Score = 33.1 bits (72), Expect = 0.20
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFE---DHTKDVLSVAFSVDNR-----QIVSGSRDKT 407
L LSGS D+T+R+W + E HTK V S+A + I+SGS D
Sbjct: 338 LLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGE 397
Query: 408 IKLW 419
+K W
Sbjct: 398 VKCW 401
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Frame = +3
Query: 261 SGSWDKTLRLW---DLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 428
SGS D+++ +W D + R H K +LS+ F+V + ++SGS D+T+++W
Sbjct: 297 SGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FNVSDL-LLSGSADRTVRIWRRG 354
Query: 429 AECKYTIQD--DGHS 467
+ Y+ + GH+
Sbjct: 355 PDSSYSCLEVLSGHT 369
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
+GS D+ +R+W G+ E H V ++A + D + SGS D++I +W
Sbjct: 251 TGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVW 307
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 28 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 174
S + +RG LRGH+ + + D++LS S D+T+ +W+ D +
Sbjct: 313 SNYMAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGPDSS 358
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 357 AFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPN 500
A +V + I S S DKT+K+W CK +I+ H D V+ + S N
Sbjct: 200 ALAVSDGFIYSVSWDKTLKIWRASDLRCKESIK--AHDDAVNAIAVSTN 246
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSGSRDKTIKLW 419
++ S D +RL+D + K R + H K +V S F+ D R ++S +D T+KLW
Sbjct: 190 ITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLW 245
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSGSRDKTIKLW 419
++ S D +RL+D + K R + H K +V S F+ D R ++S +D T+KLW
Sbjct: 282 ITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLW 337
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
SGS DK++ D+ + + H +V + +S DNR++ SG D + +WN
Sbjct: 309 SGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQ-HST 367
Query: 438 KYTIQDDGHSDWVSCVRFSPN 500
+ ++ H+ V + +SP+
Sbjct: 368 QPVLKYSEHTAAVKAIAWSPH 388
Score = 34.3 bits (75), Expect = 0.088
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
HT VL +A S D + IV+G+ D+T++ WN K
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 499
Score = 31.5 bits (68), Expect = 0.62
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
LA+ S K +++WD + K TR E H V ++A+ + + SGSRDK+I +
Sbjct: 267 LAVGTSTGK-VQIWDASRCKRTRTMEGHRLRVGALAWG--SSVLSSGSRDKSILQRDIRC 323
Query: 432 ECKYTIQDDGHSDWVSCVRFS 494
+ + + GH V +++S
Sbjct: 324 QEDHVSKLAGHKSEVCGLKWS 344
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKGDVVGSERW 694
IV+CG D V + K K++ HS ++N V +PDGS + D KG + +
Sbjct: 160 IVTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTC 219
Query: 695 QTPPHLRPQ*YHHGLV 742
+ L H G +
Sbjct: 220 EILGELSSDDGHKGSI 235
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 288 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGH 464
+WD +G F+ H++ VLS A +IV+ D + + K+ + H
Sbjct: 130 MWD--SGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEG-PPFKFKLSSREH 186
Query: 465 SDWVSCVRFSPN 500
S++V+CVRF+P+
Sbjct: 187 SNFVNCVRFAPD 198
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +3
Query: 327 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+ H + +V++S D +Q+++ S DK+ K+W+
Sbjct: 229 DGHKGSIYAVSWSPDGKQVLTVSADKSAKIWD 260
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 512 IIVSCGWDRTVKVWHLTNCKLKI-NHLGHSGYLNTVTVSPDGSLCASGGKD 661
+ S +R VW + ++K+ N L HS +N + SP+ ++ A+G D
Sbjct: 505 MFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLD 555
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
G D +++L KT H V +A S DN +V+GSRD T+ LW
Sbjct: 2644 GHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 28 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 159
S+ K T GH VT +A +P + +++ SRD T+++W++
Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRI 2697
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 288 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTL---AECKYTIQD 455
+WDL AGK+ +E H + + S+ F+ N ++ + S D T LW+ A+ T+
Sbjct: 332 VWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLST 391
Query: 456 DGHSDWVSCVRFSPN 500
HS V FSP+
Sbjct: 392 VNHSRAVHSAYFSPS 406
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +2
Query: 476 VMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 655
V C L + Q ++ S WDRTVKVW + + K + H +N+VT + SL +G
Sbjct: 138 VSCLSLAED-QGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAE--SLVFTGS 194
Query: 656 KD 661
D
Sbjct: 195 AD 196
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
L S SWD+T+++W + K + H V SV + + +GS D T+K+W
Sbjct: 149 LLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV--TTAESLVFTGSADGTVKVW 202
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L S SWD++ ++W + K E D ++ + + +GS DK IK+WN
Sbjct: 206 LLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKVWN 262
Score = 36.7 bits (81), Expect = 0.016
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 13/70 (18%)
Frame = +3
Query: 252 LALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNR--------QIVSG 392
L LSGS DK+LR+W + E HTK V S+A SV + + SG
Sbjct: 340 LVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDSDSNSDYSCMVYSG 399
Query: 393 SRDKTIKLWN 422
S D ++K+WN
Sbjct: 400 SLDLSLKVWN 409
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +2
Query: 458 WTQRLGVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDG 634
W + + + ++ S WDR+ K+W ++ K L H +N + VS DG
Sbjct: 188 WVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDG 247
Query: 635 SLCASGGKDMK 667
+G D K
Sbjct: 248 -FVYTGSADKK 257
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 49 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 228
G LRGH + +A D++LS S DK+L VW+ E L GH+ +
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKS 378
Query: 229 VVLS---SDGN 252
+ +S SD N
Sbjct: 379 LAVSVSDSDSN 389
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 446
D T+ LWD + G T+ ++ V S+ ++ D R + G + ++LW++ + +
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 218
Query: 447 IQDDGHSDWVSCVRFSPNH 503
GH V + ++ NH
Sbjct: 219 TLKGGHQSRVGSLAWN-NH 236
Score = 34.7 bits (76), Expect = 0.066
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Frame = +3
Query: 261 SGSWDKTLRLWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVS---GSRDKTIK 413
SG D + +WD ++ TT+ R E+HT V ++A+ +++ G D+TIK
Sbjct: 283 SGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIK 342
Query: 414 LWNT 425
WNT
Sbjct: 343 FWNT 346
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L+ G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 374 LSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 430
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +3
Query: 324 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVR 488
+ HT++V + +S +Q+ SG D + +W+ ++A T Q + H+ V +
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALA 321
Query: 489 FSPNHANPLS 518
+ P AN L+
Sbjct: 322 WCPFQANLLA 331
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 446
D T+ LWD + G T+ ++ V S+ ++ D R + G + ++LW++ + +
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 208
Query: 447 IQDDGHSDWVSCVRFSPNH 503
GH V + ++ NH
Sbjct: 209 TLKGGHQSRVGSLAWN-NH 226
Score = 34.7 bits (76), Expect = 0.066
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Frame = +3
Query: 261 SGSWDKTLRLWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVS---GSRDKTIK 413
SG D + +WD ++ TT+ R E+HT V ++A+ +++ G D+TIK
Sbjct: 273 SGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIK 332
Query: 414 LWNT 425
WNT
Sbjct: 333 FWNT 336
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L+ G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 364 LSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 420
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +3
Query: 324 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVR 488
+ HT++V + +S +Q+ SG D + +W+ ++A T Q + H+ V +
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALA 311
Query: 489 FSPNHANPLS 518
+ P AN L+
Sbjct: 312 WCPFQANLLA 321
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
G D ++++W L G +R + HT D+ SV FS D R ++S S D ++K+W+
Sbjct: 345 GVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWD 401
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
SGS DKT+++WDL + + H V S+ ++ ++S S D TIKLW
Sbjct: 327 SGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLL--CWDKCLISSSLDGTIKLW 377
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 360 FSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQ 452
F V + SGS DKTIK+W NTL +C+ T++
Sbjct: 318 FVVGGEVLYSGSVDKTIKVWDLNTL-QCRMTLK 349
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L+ G L LW + HT VL +A S D + S + D+T++LWN
Sbjct: 344 LSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFG 403
Query: 432 E 434
E
Sbjct: 404 E 404
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 452
HT++V + +S +++ SG D + +W+ +LA T Q
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQ 275
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/77 (20%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 279 TLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 452
T+ LWD ++ T++ +D V S+ ++ D + G + +++W+ ++
Sbjct: 131 TVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTL 190
Query: 453 DDGHSDWVSCVRFSPNH 503
GH V + ++ NH
Sbjct: 191 RGGHESRVGSLAWN-NH 206
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDH---TKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L +GS D +L +W+ ++ + H T+ + + + ++ +SGS+D ++ + N
Sbjct: 211 LICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVN 270
Query: 423 TLAECKYTIQDDGHSDWVSCVRFSPNHAN-PLS 518
+ K + H+D V CV+FSP+ A PL+
Sbjct: 271 IVTG-KVVSSLNSHTDSVECVKFSPSSATIPLA 302
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI---VSGSRDKTIKLWN 422
LA+SGS D ++ + ++ GK HT V V FS + I +G DK + +W+
Sbjct: 256 LAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWD 315
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L +G D LW + G H V +AFS D + + SG D +++++ +
Sbjct: 85 LVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASS 144
Query: 432 ECKYTIQDDGHSDWVSCVRFSP 497
+ DG + VR+ P
Sbjct: 145 GTLKCVL-DGPGAGIEWVRWHP 165
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +2
Query: 485 QILTQSCQP----IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 652
++ +C P ++ + G D +W + N GH ++ + S DG L ASG
Sbjct: 72 ELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASG 131
Query: 653 GKD 661
G D
Sbjct: 132 GLD 134
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
+G + T+ +WD G + H V +++ S + IVS S D T +++ +
Sbjct: 345 TGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFES 399
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = +1
Query: 52 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 231
T GH G + +A +P ++ + D +WK+ + +P GH +S +
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-----GHKDSVSCL 119
Query: 232 VLSSDG 249
S DG
Sbjct: 120 AFSYDG 125
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L+ G L LW + HT VL +A S D + S + D+T++LWN
Sbjct: 327 LSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFG 386
Query: 432 E 434
E
Sbjct: 387 E 387
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 279 TLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 452
T+ LWD ++G T + ++ V S+ ++ D + G + ++LW+ ++ +
Sbjct: 113 TVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTL 172
Query: 453 DDGHSDWVSCVRFSPNH 503
GH V + ++ NH
Sbjct: 173 RGGHESRVGSLAWN-NH 188
Score = 27.9 bits (59), Expect = 7.6
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
HT++V + +S +++ SG D + +W+
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWD 246
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +3
Query: 273 DKTLRLWDLAAG-KTTRRFEDHTKD---VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
++ +RLW++ K R++ H + + S I SGS D + +W+ + K
Sbjct: 464 NQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHR-STGK 522
Query: 441 YTIQDDGHSDWVSCVRFSPNHANPLS 518
++ GH+ V+CV +SP + + L+
Sbjct: 523 LIVELPGHAGAVNCVSWSPTNLHMLA 548
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAG---KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-L 428
S S D+T +W+++A H K V+++ +S D+RQ+++ ++ I+ W+
Sbjct: 291 SSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDS 350
Query: 429 AECKYTIQDDGHSDWVSC 482
+C + + G S +SC
Sbjct: 351 GDCVHMYEKGGISP-ISC 367
Score = 35.1 bits (77), Expect = 0.050
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 309 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSC 482
+T + E HT +V + FS + + + S S+D+T +W A+ +++ GH V
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 483 VRFSPNHANPLS 518
+ +SP+ L+
Sbjct: 325 ILWSPDDRQVLT 336
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 506 QPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKGDVVG 682
Q I S D V +WH + KL + GH+G +N V+ SP + AS D + G
Sbjct: 501 QAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWG 560
Query: 683 SER 691
+R
Sbjct: 561 LDR 563
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLW 419
SGS D + +W + GK H V V++S N + S S D TI++W
Sbjct: 506 SGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 31.1 bits (67), Expect = 0.82
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 73 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 168
W Q + N KY + SSS+D+T I+W+++ D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISAD 306
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = +1
Query: 34 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 213
T KL L GH G V ++ +P M+ S+S D T+ +W L R N +K + G S
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR-INQQNQKKKLVQGSS 578
Query: 214 HFISDVVLSSDGN 252
+ V+ +GN
Sbjct: 579 S--NGVIHRCNGN 589
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 452
D + L+D A T R + + S + S DN+ I+ ++ I+LWN + K +
Sbjct: 424 DSVISLFDREA--TVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSR 481
Query: 453 DDGH 464
GH
Sbjct: 482 YKGH 485
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
S S D T+R WD + + R + + +++ S ++ +++G + + LW+
Sbjct: 104 SCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSK 163
Query: 438 KYTIQDDGHSDWVSCVRFSPNHANPL 515
+ ++ H D V+ V F PN N L
Sbjct: 164 QVACLEESHMDDVTQVHFVPNKPNKL 189
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
SG DK ++W L +G H + ++A+ + +GS DKT+K W+T
Sbjct: 89 SGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDT 143
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDL-----AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 416
+ ++ SWD +R W++ + + H + VL A+ D + SG DK K+
Sbjct: 39 ILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKM 98
Query: 417 WNTLA 431
W L+
Sbjct: 99 WPLLS 103
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF--SVDNRQIVSGSRDKTIKLWN 422
L +GSWDKTL+ WD T ++ HT+ + + SV + +V G+ D+ + ++N
Sbjct: 128 LLATGSWDKTLKYWD-----TRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFN 181
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 36.3 bits (80), Expect = 0.022
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +3
Query: 246 R*LALSGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSGSRDKT 407
R L SG+ L +W L +T + ++ H KDVL + +S D+ ++SGS D +
Sbjct: 17 RELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNS 76
Query: 408 IKLWNTLAECKYTIQDDGHSDWVSCVRFSP 497
+W+ + I D H +V V + P
Sbjct: 77 CIIWDVNKGSVHQIL-DAHCHYVQGVAWDP 105
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+SGS D + +WD+ G + + H V VA+ + + S S D+T +++ +
Sbjct: 69 ISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKPQT 128
Query: 438 K 440
K
Sbjct: 129 K 129
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
SGS DKT+++W L + + DH+ V+S+ ++ ++S S D T+K+W
Sbjct: 289 SGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLI--CWDQFLLSCSLDNTVKIW 339
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTT 317
+GS D+TLR+WD A+G+ T
Sbjct: 168 TGSKDETLRVWDCASGQCT 186
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAG----KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
L +G+ D ++ W A + + HT V V V ++ SGS DKTIK+W
Sbjct: 242 LLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAV--VTLYVGANRLYSGSMDKTIKVW 299
Query: 420 N-TLAECKYTIQD 455
+ +C T+ D
Sbjct: 300 SLDNLQCIQTLTD 312
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 31 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 153
E+ L L GH V+ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
++G D +RL+D GK + H V V F+ SGS D TI++W T
Sbjct: 244 VAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIWQT 299
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 282 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 669 AMLWDLNDGKHLHTLDHNDIITALCFS 749
A LWD G LH+ +H I+ A FS
Sbjct: 85 AKLWDALTGDVLHSFEHKHIVRACAFS 111
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 35.9 bits (79), Expect = 0.029
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSGSRDKTIK 413
L SG+ L +W L +T + ++ H KDVL + +S D+ ++SGS D +
Sbjct: 78 LLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCI 137
Query: 414 LWNTLAECKYTIQDDGHSDWVSCVRFSP 497
+W+ + I D H +V V + P
Sbjct: 138 IWDVNKGSVHQIL-DAHCHYVQGVAWDP 164
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+SGS D + +WD+ G + + H V VA+ + + S S D+T +++ +
Sbjct: 128 ISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKPQT 187
Query: 438 K 440
K
Sbjct: 188 K 188
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 35.9 bits (79), Expect = 0.029
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSGSRDKTIK 413
L SG+ L +W L +T + ++ H KDVL + +S D+ ++SGS D +
Sbjct: 78 LLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCI 137
Query: 414 LWNTLAECKYTIQDDGHSDWVSCVRFSP 497
+W+ + I D H +V V + P
Sbjct: 138 IWDVNKGSVHQIL-DAHCHYVQGVAWDP 164
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+SGS D + +WD+ G + + H V VA+ + + S S D+T +++ +
Sbjct: 128 ISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKPQT 187
Query: 438 K 440
K
Sbjct: 188 K 188
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 282 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
+ LW + H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 410 IMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVK 462
Score = 35.5 bits (78), Expect = 0.038
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
SGS D+ + D+ + H +V + +S D+R++ SG D + +WN ++
Sbjct: 272 SGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQ- 330
Query: 438 KYTIQDDGHSDWVSCVRFSPNHANPLS 518
+ ++ H+ V + +SP+ ++ L+
Sbjct: 331 QPILKLTEHTAAVKAITWSPHQSSLLA 357
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +3
Query: 318 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 497
+ E H V ++A++ + ++SGS D I +WN + D GH+ + C +F P
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Query: 498 NHANPL 515
++ L
Sbjct: 104 ETSDEL 109
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAF--SVDNRQIVSGSRDKTIKLWN 422
L +SGS D + +W+ ++ K + HT ++ F + +VSG+ D ++L+N
Sbjct: 64 LLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDAEVRLFN 123
Query: 423 T 425
T
Sbjct: 124 T 124
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKD---VLSVAFSVDNRQIVSGSRDKTIKLWNTL 428
++GS+D+++R++ G + + HTK V V +S D ++SGS D ++LW
Sbjct: 295 VTGSYDRSVRIFPYNGGHSREIY--HTKRMQRVFCVKYSCDATYVISGSDDTNLRLWKAK 352
Query: 429 A 431
A
Sbjct: 353 A 353
Score = 35.5 bits (78), Expect = 0.038
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 467 RLGVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 646
R GV C + I S D +++W +++ + GH G + +T S DG++
Sbjct: 56 RDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLV 115
Query: 647 SGGKD 661
S G D
Sbjct: 116 SCGTD 120
Score = 34.7 bits (76), Expect = 0.066
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 49 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 228
G + GH V+ +A NP Y I S+S D + +W ++ P GH +
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP-----GHQGAVRG 104
Query: 229 VVLSSDGN 252
+ S+DGN
Sbjct: 105 LTASTDGN 112
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 35.5 bits (78), Expect = 0.038
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 321 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 500
+ + H V + FS ++ QI++ S+D +I++WN +Y + +D + V + +
Sbjct: 284 QLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN--INVRYHLDEDPKTLKVFPIPLCDS 341
Query: 501 HANPLSY 521
NPL Y
Sbjct: 342 GGNPLHY 348
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 35.5 bits (78), Expect = 0.038
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +2
Query: 467 RLGVMCQILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 646
R V C I +S + +I DR VK+W + + GH G + + VS + +L A
Sbjct: 305 RNAVYCAIFDRSGRYVITGSD-DRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVA 363
Query: 647 SGGKD 661
S D
Sbjct: 364 SASND 368
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS---VDNRQIVSGSRDKTIKLWN 422
L S S D +R+W L G HT V ++AFS Q++S S D T ++W+
Sbjct: 361 LVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVW 153
LRGH G VT IA +P+ + +LSSS D T +W
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIW 419
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 35.5 bits (78), Expect = 0.038
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKGDVVGSERW 694
I +CG D V + K +H HS ++N + SPDG+ + D KG + +
Sbjct: 24 IATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTG 83
Query: 695 QTPPHLRPQ*YHHGLV 742
L + H G +
Sbjct: 84 DKVGELASEDGHKGSI 99
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 324 FEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 500
F+ H++ VLS AF +I + D + ++ K+ HS++V+C+R+SP+
Sbjct: 4 FDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDG-PPFKFHSSHREHSNFVNCIRYSPD 62
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/31 (29%), Positives = 22/31 (70%)
Frame = +3
Query: 327 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
+ H + +V++S D++++++ S DK+ K+W
Sbjct: 93 DGHKGSIYAVSWSPDSKRVLTVSADKSAKVW 123
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 35.5 bits (78), Expect = 0.038
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+GS D T++ W L G H K V+S V N + SGS D T++LW+
Sbjct: 602 TGSGDNTIKAWSLQDGSLLCTMSGH-KSVVSTLVVV-NGVLYSGSWDGTVRLWS 653
Score = 32.7 bits (71), Expect = 0.27
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 16/81 (19%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVS----------G 392
SGSWD T+RLW L+ + T D L + + N I+S G
Sbjct: 642 SGSWDGTVRLWSLSDNSLLTVLGEETPGIIWRDDTLMKSMKIQNGAILSIAVNGKWLFTG 701
Query: 393 SRDKTIKLWNTLAECKYTIQD 455
DKTI + L K +QD
Sbjct: 702 GWDKTINVQGNLGRLKRNVQD 722
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 419
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
G D T++++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 895 GMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Frame = +3
Query: 282 LRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-Y 443
++L+ G+ R+ + H V ++FS N+Q +++ DKTIK+W+ K +
Sbjct: 441 VQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRH 500
Query: 444 TIQDDGHSDWVSCVRFSPN 500
T + + C + N
Sbjct: 501 TFEGHEAPVYSVCPHYKEN 519
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 419
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
G D T++++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 895 GMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Frame = +3
Query: 282 LRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-Y 443
++L+ G+ R+ + H V ++FS N+Q +++ DKTIK+W+ K +
Sbjct: 441 VQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRH 500
Query: 444 TIQDDGHSDWVSCVRFSPN 500
T + + C + N
Sbjct: 501 TFEGHEAPVYSVCPHYKEN 519
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 35.1 bits (77), Expect = 0.050
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
D WD+ +GK F+ H+ + +V QI++GS D T ++W+
Sbjct: 180 DSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWD 229
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+ + D W + + K+K+ GHS YL+TV S +G +D
Sbjct: 174 VFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSED 222
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 34.7 bits (76), Expect = 0.066
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL--A 431
S SWD ++R WD+ GK + F + + V + I +G D +++W+
Sbjct: 288 SSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPG 346
Query: 432 ECKYTIQDDGHSDWVSCVRF 491
Q HS W+S ++
Sbjct: 347 TSAPVFQFSSHSSWISACKW 366
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 34.7 bits (76), Expect = 0.066
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL--A 431
S SWD ++R WD+ GK + F + + V + I +G D +++W+
Sbjct: 288 SSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPG 346
Query: 432 ECKYTIQDDGHSDWVSCVRF 491
Q HS W+S ++
Sbjct: 347 TSAPVFQFSSHSSWISACKW 366
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
LS S+D + LWDL + H VLS + +VSG D +++ + +A
Sbjct: 375 LSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGESVVSGGADSNLRISSGIA 431
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 267 SWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
S ++LR + + R F+ H V+S+ S N +SGS D++++LW+
Sbjct: 91 STGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWD 142
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 348 LSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHA 506
+ F+ D + ++SGS D T+ WN + + + + VSC++++P A
Sbjct: 248 IEATFTPDGKYVLSGSGDGTLHAWN-IENPSEVARWENNIGVVSCLKWAPRRA 299
>At3g59850.1 68416.m06679 polygalacturonase, putative / pectinase,
putative similar to SP|P48979 Polygalacturonase
precursor (EC 3.2.1.15) (PG) (Pectinase) {Prunus
persica}; contains PF00295: Glycosyl hydrolases family
28 (polygalacturonases)
Length = 388
Score = 34.7 bits (76), Expect = 0.066
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Frame = +2
Query: 146 SCGS*PETKTTTVYLKSVYTVIRTSFLMLCCLVTVISPF-RFLGQDFAFVGSRCRQDYQT 322
S G+ P+ KT + +TV+ VT++ P RFL + F GS+C++ T
Sbjct: 27 SYGAKPDGKTDST---KAFTVLWAKACASVKPVTILVPKGRFLLRSIIFDGSKCKRKSVT 83
Query: 323 IRGPY*GCTLGSLLS*QPSDSVWFSRQDYQTL-EHPCGVQVYHPR*WTQRLGV-MCQILT 496
R G+L++ PSD +++Y L +H G+ VY Q + C+
Sbjct: 84 FR------IQGTLVA--PSDYRVIGKENYWILFQHLDGISVYGGVLDAQGASLWSCKKSG 135
Query: 497 QSCQPIIVSCGW--DRTVKVWHLTNCKLKINHLGHSGYLNT----VTVSPDGS 637
++C S G+ R V + LT+ ++ H+ +G N V VS DG+
Sbjct: 136 KNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGN 188
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 34.7 bits (76), Expect = 0.066
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 419
DKT+++WD G FE H V SV +N Q I S + D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTL 428
H +V +AFS N+Q +V+ DKTIK+W+ +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAV 496
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 905 GMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 34.7 bits (76), Expect = 0.066
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 419
DKT+++WD G FE H V SV +N Q I S + D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTL 428
H +V +AFS N+Q +V+ DKTIK+W+ +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAV 496
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 905 GMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
L SG D ++R+W++ T ++ +H V + S ++SGS DKTI++W
Sbjct: 865 LLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVW 922
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKD 344
LSGS DKT+R+W + GK TKD
Sbjct: 911 LSGSADKTIRVWQIVKGKLECAEVIKTKD 939
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 34.3 bits (75), Expect = 0.088
Identities = 24/93 (25%), Positives = 39/93 (41%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L+ G L LW + HT VL +A S + + S + D+ ++LWN
Sbjct: 358 LSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFG 417
Query: 432 ECKYTIQDDGHSDWVSCVRFSPNHANPLSYPVV 530
E T + +++ FS H N L + +V
Sbjct: 418 EPPKTTKKAASKNYLEL--FS--HVNSLRWCLV 446
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 34.3 bits (75), Expect = 0.088
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 321 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 497
+ H V +V F+ +VSGS D+ I LWN L+ + GH + V +F P
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIP 108
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 43 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 192
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 43 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 192
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 34.3 bits (75), Expect = 0.088
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 52 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 156
TL GH G V Q+A +PK+ ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK 86
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +3
Query: 378 QIVSGSRDKTIKLW-----NTLAECKYTIQDDGHSDWVSCVRFSPNHANPLSYPVVGTE 539
++ SG D T+K+W + +C + H+DWV V ++PN P S G+E
Sbjct: 178 KLASGGCDSTVKVWKFSNGSWKMDCFPALNK--HTDWVRDVAWAPNLGLPKSTIASGSE 234
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 419
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
G D T++++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 884 GMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 419
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
G D T++++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 884 GMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 34.3 bits (75), Expect = 0.088
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
D +R D AGK H K V V +S Q+++GS DKTIK W+
Sbjct: 77 DTKVRRIDFNAGKEDV-LGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWD 125
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRR 323
++GSWDKT++ WD T R
Sbjct: 113 ITGSWDKTIKCWDPRGASGTER 134
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 52 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 156
TL GH G V ++A +PKY ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWK 86
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +3
Query: 378 QIVSGSRDKTIKLWNTL-----AECKYTIQDDGHSDWVSCVRFSPNHANPLSYPVVGTE 539
++ SG D T+K+W +C +Q H+DWV V ++PN P S G++
Sbjct: 178 KLASGGCDNTVKVWKLANGSWKMDCFPALQK--HTDWVRDVAWAPNLGLPKSTIASGSQ 234
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
L + S+D T +W + E H +V SV+++ + + SRDK++ +W
Sbjct: 88 LLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEV 147
Query: 426 LAECKYTIQD--DGHSDWVSCVRFSP 497
L +Y GH+ V V++ P
Sbjct: 148 LEGNEYDCAAVLTGHTQDVKMVQWHP 173
Score = 33.5 bits (73), Expect = 0.15
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Frame = +3
Query: 261 SGSWDKTLRLWD---LAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
S S D T+R+W+ L+ T + E HT+ V S A+S + + + S D T +W
Sbjct: 44 SCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKN 103
Query: 426 LA---ECKYTIQDDGHSDWVSCVRFS 494
EC T+ +GH + V V ++
Sbjct: 104 YGSEFECISTL--EGHENEVKSVSWN 127
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = +2
Query: 509 PIIVSCGWDRTVKVWHLTN------CKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
PI+ SC D TV++W ++ CK + H+ + + SP G L A+ D
Sbjct: 40 PILASCSGDNTVRIWEQSSLSRSWTCKTVLEET-HTRTVRSCAWSPSGQLLATASFD 95
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Frame = +3
Query: 267 SWDKTLRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW-----N 422
S DK++ +W++ G HT+DV V + + S S D TIK+W +
Sbjct: 137 SRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDD 196
Query: 423 TLAECKYTI--QDDGHSDWVSCVRFS 494
+C T+ ++GHS V + F+
Sbjct: 197 GEYQCVQTLGESNNGHSSTVWSISFN 222
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
H+ V S++F+ ++V+ S D T+K+W T
Sbjct: 212 HSSTVWSISFNAAGDKMVTCSDDLTLKIWGT 242
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 431
L+ G L LW + HT VL +A S + + S + D+ ++LWN
Sbjct: 360 LSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFG 419
Query: 432 E 434
E
Sbjct: 420 E 420
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 452
HT++V + +S + SG D + +W+ +LA K T Q
Sbjct: 251 HTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQ 291
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 440
SGSWD ++R+WD ++ K + H+ V +A SGS + +W+ +E
Sbjct: 272 SGSWDMSVRIWDRSSMKCVKTLR-HSDWVWGLAPHETTLASTSGS---DVYIWDVSSETP 327
Query: 441 YTIQDDGH 464
I D H
Sbjct: 328 LAIIPDAH 335
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +3
Query: 267 SWDKTLRLWDLAA---GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAE 434
S D L+DL KT R H + S+A +D I SGS D ++++W+ + +
Sbjct: 231 SLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLA--LDMTSIFSGSWDMSVRIWDRSSMK 288
Query: 435 CKYTIQDDGHSDWV 476
C T++ HSDWV
Sbjct: 289 CVKTLR---HSDWV 299
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 318 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFS 494
++ E H V +V+F+ + ++SGS D+ + LW+ L K + GH++ V +F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFH-SGHANNVFQAKFM 111
Query: 495 P 497
P
Sbjct: 112 P 112
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAE 434
+SG D ++ WD+A H V S V++ +V+GS D T+K+W+
Sbjct: 152 VSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVH 211
Query: 435 CKYTIQDDGHSDWVSCVRFSPN 500
I + H V V + P+
Sbjct: 212 TSNWIAEINHGLPVEDVVYLPS 233
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 282 LRLWDLAAGKTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD 458
++++D+ R H+ V + V D +VSG D +K W+ T+ D
Sbjct: 117 VQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGA---TVISD 173
Query: 459 --GHSDWVSCVRFSP 497
GH D+V C SP
Sbjct: 174 LLGHKDYVRCGDCSP 188
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/80 (20%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 428
+ ++GS+D T+++WD + E +H V V + + + +++ + ++K+W+ +
Sbjct: 193 MLVTGSYDHTVKVWDARVHTSNWIAEINHGLPVEDVVY-LPSGGLIATAGGNSVKVWDLI 251
Query: 429 AECKYTIQDDGHSDWVSCVR 488
K + H+ V+ +R
Sbjct: 252 GGGKMVCSMESHNKTVTSLR 271
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Frame = +2
Query: 503 CQPI----IVSCGWDRTVKVW----HLTNCKLKINHLGHSGYLNTVTVSPDGSLCA-SGG 655
C P+ +V+ +D TVKVW H +N +IN H + V P G L A +GG
Sbjct: 186 CSPVNDSMLVTGSYDHTVKVWDARVHTSNWIAEIN---HGLPVEDVVYLPSGGLIATAGG 242
Query: 656 KDMK-GDVVG 682
+K D++G
Sbjct: 243 NSVKVWDLIG 252
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKD 661
+VS G D VK W + + + LGH Y+ SP + S+ +G D
Sbjct: 151 LVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYD 200
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 395
LSG +LRLWD+ A K + +L V F +Q +S S
Sbjct: 263 LSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSS 308
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWN-TLAEC 437
D T+++ D G + H + V F + +IV SGS D ++LWN T +EC
Sbjct: 127 DHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTTTSEC 183
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 339 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHA 506
+ ++ AFS D R + S D T+K+ + C + + WV VRF P+H+
Sbjct: 107 RSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWV--VRFHPHHS 161
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 165
+ H G V Q+ +P + ++ SS D+ L+VW L R
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNR 336
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKL 416
LSGS D+ + LWD++A + +E H + V++ + N + S D + +
Sbjct: 185 LSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVI 244
Query: 417 WNTLAECKYTIQDDGHSDWVSCVRFSP 497
W+T + Q H V+ + F+P
Sbjct: 245 WDTRTN-QMQHQVKVHEREVNYLSFNP 270
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 153
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 153
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSGSRD 401
L +S S DKTLR+WDL T + F + H V FS+ + ++S SR+
Sbjct: 467 LLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGV--SGFSIWGKDVISISRN 516
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 58 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 165
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +3
Query: 318 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 497
++ + H V +V+F+ D ++SGS D+ + LW+ D GH + + +F P
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS--VDNRQIVSGSRDKTIK 413
+ LSGS D+ + LWD F+ H ++ F D+R IV+ + DK ++
Sbjct: 69 ILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQVR 125
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +1
Query: 28 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 159
SET+ +L GH V +I T P P +++++S+D+++ +W +
Sbjct: 117 SETI--HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKT 407
S ++D +++WD+A + ++H K V S+ S D + SGS D T
Sbjct: 601 SSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT 650
Score = 31.5 bits (68), Expect = 0.62
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
GS D + +DL K H+K V V F VD+ +VS S D T+KLW+
Sbjct: 679 GSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLWD 731
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTV-SPDGSLCASGGKDMKGDVVGS 685
I S +D V++W + +L H + ++ + S D +L ASG D G +G+
Sbjct: 599 IASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGTGVSIGT 656
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
++G D +R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 244 VAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 282 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 669 AMLWDLNDGKHLHTLDHNDIITALCFS 749
A LWD G LH+ +H I+ A FS
Sbjct: 85 AKLWDALTGDVLHSFEHKHIVRACAFS 111
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
++G D +R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 244 VAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 282 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 669 AMLWDLNDGKHLHTLDHNDIITALCFS 749
A LWD G LH+ +H I+ A FS
Sbjct: 85 AKLWDALTGDVLHSFEHKHIVRACAFS 111
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 165
L H G V Q+ +P + ++ SS D+ L+VW + R
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINR 337
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKL 416
LSGS D+ + LWD++A T + +E H + VA+ + N I S D + +
Sbjct: 186 LSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVI 245
Query: 417 WNTLAECKYTIQDDGHSDWVSCVRFSP 497
W+ L + Q H ++ + F+P
Sbjct: 246 WD-LRTNQMQHQVKVHEREINYLSFNP 271
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 31.9 bits (69), Expect = 0.47
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Frame = +3
Query: 273 DKTLRLWDLAAGKT--TRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKY 443
D L LWD G T+ + H D+ V ++ D+ I++GS D T++L++
Sbjct: 314 DSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTAN 373
Query: 444 TIQD-----DGHSDWVSCVRFSPNHAN 509
+ +GH V CV++SP+ ++
Sbjct: 374 GVGSPIYKFEGHKAAVLCVQWSPDKSS 400
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 28 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 153
S T+ RG GH V +A +P S D LI+W
Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILW 320
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 288 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
LW++ K R + H+ V + FS D+ ++S SRD+ +++
Sbjct: 631 LWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFS 675
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +1
Query: 55 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 159
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 309 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
K + E H + + + +++ Q + SRDKT+K+W+
Sbjct: 687 KLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWS 724
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 55 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 156
L GH V +A NP +I S S DKT+ +W+
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/77 (24%), Positives = 41/77 (53%)
Frame = +1
Query: 4 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 183
+++ F+ SE++ + LRGH V ++ N ++ + RDK++ +W++ +E++
Sbjct: 74 VWENFATDSESVSV---LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDDEF 129
Query: 184 IPQKRLYGHSHFISDVV 234
L GHS + V+
Sbjct: 130 DTIAVLTGHSEDVKMVL 146
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/53 (28%), Positives = 31/53 (58%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
SG+ D ++++W L + + +HT V+S+ ++ ++S S D T+K+W
Sbjct: 282 SGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLI--CWDQFLLSCSLDNTVKIW 332
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 31.5 bits (68), Expect = 0.62
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 333 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
H K V V +S Q+++GS DKT+K W+
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
Score = 27.9 bits (59), Expect = 7.6
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +3
Query: 258 LSGSWDKTLRLWD 296
++GSWDKT++ WD
Sbjct: 114 ITGSWDKTVKCWD 126
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 324 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPN 500
++ HT V S++ I SGS D ++++W C Q D + + CV ++P
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFD---EAIMCVAWNPL 475
Query: 501 HANPLSYPVVGTEL 542
P+ +G +L
Sbjct: 476 SRLPVLAVAMGRDL 489
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 333 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 470
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 247 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 294
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 333 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 470
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 273 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 320
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 31.1 bits (67), Expect = 0.82
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 365
+SGS D T+R+WDL +G H V + S
Sbjct: 553 ISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILS 588
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 31.1 bits (67), Expect = 0.82
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +3
Query: 276 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWS 427
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 339 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHA 506
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P H+
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHS 158
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+ SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 160 IVASGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 339 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHA 506
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P H+
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHS 158
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
+ SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 160 IVASGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQIVSGSRDKTIK 413
L + S+DK ++LWDL + + TK + V FS D+R +++ + D ++
Sbjct: 598 LFATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVR 652
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
SGS+D TL +W+ H ++LS+ ++ +++S RD+T++L+
Sbjct: 280 SGSYDGTLSIWNAEHRTYIESCFGHQSELLSID-ALGRERVLSVGRDRTMQLY 331
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3
Query: 282 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
LR+ DL + R H V VA S D+ + S S+D TI W+
Sbjct: 127 LRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWD 173
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 324 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
F H V S+ F ++ SGS D T+ +WN
Sbjct: 259 FTGHCGIVSSLCFREGTAELFSGSYDGTLSIWN 291
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+G+ DKT R+WD ++ + + V S+ F+ D R + + +++T +
Sbjct: 336 TGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGY 395
Query: 438 KYTIQDDGHSDWVSCVRFSPN 500
K + D + +S + FSP+
Sbjct: 396 KKEQEIDFFGE-ISGISFSPD 415
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 288 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 467
L D + G+T + H + A+ + +G++DKT ++W+T + G+
Sbjct: 303 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNL 362
Query: 468 DWVSCVRFS 494
V +RF+
Sbjct: 363 GAVRSIRFT 371
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 437
+G+ DKT R+WD ++ + + V S+ F+ D R + + +++T +
Sbjct: 330 TGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGY 389
Query: 438 KYTIQDDGHSDWVSCVRFSPN 500
K + D + +S + FSP+
Sbjct: 390 KKEQEIDFFGE-ISGISFSPD 409
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 288 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 467
L D + G+T + H + A+ + +G++DKT ++W+T + G+
Sbjct: 297 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNL 356
Query: 468 DWVSCVRFS 494
V +RF+
Sbjct: 357 GAVRSIRFT 365
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
G D T+ ++++ + + + H K + +AFS +VS D I W+
Sbjct: 880 GMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWS 932
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 306 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 425
G ++H V +A S D+ VS S D T+K+W++
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDS 1110
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 43 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 207
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 261 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 413
+G DK ++W L +G H +A+ +V+GS DKT+K
Sbjct: 90 TGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTLK 140
>At1g26580.1 68414.m03238 expressed protein similar to putative MYB
family transcription factor GB:AAD17429 GI:4335752 from
[Arabidopsis thaliana]
Length = 493
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 593 HSGYLNTVTVSPDGSLCAS-GGKDMKGDVVGSE 688
H+G+ TV +G+LC S GG+ +GD+ E
Sbjct: 39 HAGFQKTVATVNEGNLCKSQGGESSEGDMFDEE 71
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +1
Query: 4 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 183
L+ P S S + L H G V + N K P+ + S + D T+ +W L N
Sbjct: 94 LWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLA----NPS 149
Query: 184 IPQKRLYGHSHFISDVVLSSDGN 252
P L G ++ + S N
Sbjct: 150 KPSHYLKGTGSYMQSEISSLSWN 172
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRR-FED---HTKDVLSVAFSV-DNRQIVSGSRDKTIKL 416
L +GS D WD+ R F++ HT V ++ + D I +GS D+T+++
Sbjct: 178 LVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRV 237
Query: 417 WNT 425
W+T
Sbjct: 238 WDT 240
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains
Pfam profile PF00730: HhH-GPD superfamily base excision
DNA repair protein
Length = 1729
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 410
D+T R+W+L GK + D KD + + R++ G D I
Sbjct: 702 DETTRIWNLLMGKGDEKEGDEEKDKKKEKWWEEERRVFRGRADSFI 747
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +1
Query: 28 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQ 192
S L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369
Query: 193 KRLY 204
+Y
Sbjct: 3370 TVVY 3373
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 273 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 446
D ++ + L++ K + E H + + +AFS +VS D + LW+T + K T
Sbjct: 490 DGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKLT 547
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +3
Query: 276 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS 427
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 488 ILTQSCQPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 661
+L+ C ++VS TV+ W + L H H G +NT+ +P + S G D
Sbjct: 254 LLSLRCS-VLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGAD 310
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 539 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 667
TV +W T+ + H G +++V P+G L A+ GK+ K
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERK 304
>At2g36370.1 68415.m04463 F-box family protein (FBL11) contains
similarity to leucine-rich repeats containing F-box
protein FBL3 GI:5919219 from [Homo sapiens]
Length = 785
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 476 VMCQILTQSCQPIIVSCGWDRTVKVWHLTNC 568
V C LT CQPII S GW + + HL C
Sbjct: 641 VGCLHLTSDCQPII-SAGWPGMISL-HLEEC 669
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 479 MCQILTQSCQP-IIVSCGWDRTVKVWHLTNC--KLKINHLGHSGYLNTVTVSP 628
+C + QP +++SCG D ++W + K ++ L H +N+ SP
Sbjct: 315 VCGLDCNPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSP 367
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 506 QPIIVSCGWDRTVKVWHLTNCKL 574
Q +V+CG D+ +KVW L+ KL
Sbjct: 467 QMCVVTCGDDKLIKVWDLSGKKL 489
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 515 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKGD 673
I S D +K W N ++++ + T+ S DGS S G +GD
Sbjct: 513 IFSTALDGKIKAWLYDNVGSRVDYDAPGQWCTTMLYSADGSRLFSCGTSKEGD 565
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/52 (21%), Positives = 24/52 (46%)
Frame = +3
Query: 264 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
G D ++ ++++ + + + H K + +AFS +VS D + W
Sbjct: 891 GMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFW 942
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 288 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
L D +GK E H S A+ + + + +G++D T +LW+
Sbjct: 303 LADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWD 347
>At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 884
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 678 WDLNDGKHLHTLDHNDIIT 734
WDLN K L TL+H +I+T
Sbjct: 652 WDLNTVKELETLEHLEILT 670
>At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 893
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 678 WDLNDGKHLHTLDHNDIIT 734
WDLN K L TL+H +I+T
Sbjct: 654 WDLNTVKELETLEHLEILT 672
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAG 308
+SGS D T+RLWD+ +G
Sbjct: 223 MSGSGDSTVRLWDITSG 239
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 130 RDKTLIVWKLTRDENNYGIPQKRLYGHSH 216
R+ ++++KL R+E +Y + + LYG H
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCH 299
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 336 TKDVLSVAFSVDNRQIVSGSRDKTIKLWN 422
T LSV +S D ++I SGS D I+ W+
Sbjct: 198 TGRALSVTWSADAQRIFSGSSDGLIRCWD 226
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +3
Query: 258 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 428
+S S D L + G FE H V S + + + S S D T K+WN L
Sbjct: 30 ISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNAL 86
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = +3
Query: 252 LALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 422
+ SGS D T+++WD G T + SV F I G D+ +++
Sbjct: 182 IGASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYD 241
Query: 423 TLAECKYTIQDDGHSDWVSCVRFSPNH 503
I DGH+ V+ RF +H
Sbjct: 242 IRRLVDPLIVLDGHTKTVTYARFMDSH 268
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 690 RSDPTTSPFMSLPPDAHKEPSGDTVTVF 607
R DP T ++PP A+ P G V +F
Sbjct: 265 RKDPGTFVGYTMPPSAYSSPQGSDVVLF 292
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 321 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 321 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 419
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 4 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 171
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + +
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQK 206
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 4 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 171
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + +
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQK 206
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,092,472
Number of Sequences: 28952
Number of extensions: 398447
Number of successful extensions: 2366
Number of sequences better than 10.0: 214
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2244
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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