Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20873
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.7  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.7  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1

Query: 576 STDSLSQSFILAPIIKSSLKAFHW 505
           S DSL    +L  II  SLK   W
Sbjct: 82  SLDSLILLMVLVSIILGSLKTKEW 105


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -2

Query: 683 LNLVIWISCTITKNYLT 633
           L L IW   TI  NYLT
Sbjct: 175 LMLEIWRRFTILNNYLT 191


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +3

Query: 291 VVQLFNAVRNQQKSIEK 341
           ++QLFN++R  + ++E+
Sbjct: 303 LIQLFNSLRQMKNNLER 319


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +3

Query: 291 VVQLFNAVRNQQKSIEK 341
           ++QLFN++R  + ++E+
Sbjct: 303 LIQLFNSLRQMKNNLER 319


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +3

Query: 291 VVQLFNAVRNQQKSIEK 341
           ++QLFN++R  + ++E+
Sbjct: 303 LIQLFNSLRQMKNNLER 319


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -2

Query: 683 LNLVIWISCTITKNYLT 633
           L L IW   TI  NYLT
Sbjct: 171 LMLEIWRRFTILNNYLT 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,322
Number of Sequences: 336
Number of extensions: 2977
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)