Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20868
(852 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 26 0.33
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 26 0.33
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 26 0.33
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 26 0.33
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 26 0.33
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 26 0.33
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 26 0.33
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 26 0.33
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 23 3.1
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 23 3.1
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 22 5.4
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 9.4
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.33
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 359 QVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQ 457
QVAP P+ A GH L T+ Q +PQ
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQ 79
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.33
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 359 QVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQ 457
QVAP P+ A GH L T+ Q +PQ
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQ 79
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 26.2 bits (55), Expect = 0.33
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 359 QVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQ 457
QVAP P+ A GH L T+ Q +PQ
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQ 79
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.33
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 359 QVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQ 457
QVAP P+ A GH L T+ Q +PQ
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQ 79
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 26.2 bits (55), Expect = 0.33
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 359 QVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQ 457
QVAP P+ A GH L T+ Q +PQ
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQ 79
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.33
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 359 QVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQ 457
QVAP P+ A GH L T+ Q +PQ
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQ 79
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 26.2 bits (55), Expect = 0.33
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 359 QVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQ 457
QVAP P+ A GH L T+ Q +PQ
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQ 79
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.33
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 359 QVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQ 457
QVAP P+ A GH L T+ Q +PQ
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQ 79
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 440 RQAEPQADHDQRPARGEVGG 499
+ A P ++D+R +RGEV G
Sbjct: 322 QNATPANNNDKRKSRGEVDG 341
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 440 RQAEPQADHDQRPARGEVGG 499
+ A P ++D+R +RGEV G
Sbjct: 322 QNATPANNNDKRKSRGEVDG 341
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 22.2 bits (45), Expect = 5.4
Identities = 14/53 (26%), Positives = 19/53 (35%)
Frame = +2
Query: 305 HAAQAGRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQAD 463
H Q+G H H A + S G ++ + HH QA P D
Sbjct: 14 HHHQSGSVAGHHHEQSAAAAAAYRSFPLSLGMSP-YASSQHHHHHLQARPPQD 65
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.4 bits (43), Expect = 9.4
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -3
Query: 787 DVSQKLIF*FYTALENNQFFFSIPEHFTFSEMCPFRNCVF 668
D+SQ+ FY +L N+ +HF+ FR +F
Sbjct: 292 DISQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF 331
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,509
Number of Sequences: 336
Number of extensions: 3398
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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