Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20867
(704 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28360.1 68416.m03544 ABC transporter family protein similar ... 36 0.020
At5g09930.1 68418.m01148 ABC transporter family protein 35 0.060
At5g64840.1 68418.m08157 ABC transporter family protein 34 0.11
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 33 0.14
At3g28415.1 68416.m03551 P-glycoprotein, putative contains ATP-b... 33 0.18
At3g28380.1 68416.m03546 P-glycoprotein, putative similar to P-g... 33 0.18
At3g28345.1 68416.m03541 ABC transporter family protein similar ... 33 0.18
At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein, pu... 33 0.18
At4g33460.1 68417.m04753 ABC transporter family protein ABC-type... 33 0.24
At3g28390.1 68416.m03547 P-glycoprotein, putative similar to P-g... 33 0.24
At4g01820.1 68417.m00239 multidrug resistance P-glycoprotein, pu... 32 0.43
At4g18050.1 68417.m02686 ABC transporter family protein contains... 31 0.56
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 31 0.56
At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein, pu... 31 0.74
At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein, pu... 31 0.74
At5g61740.1 68418.m07747 ABC transporter family protein ABC fami... 31 0.98
At5g14100.1 68418.m01649 ABC transporter family protein contains... 30 1.3
At1g35110.1 68414.m04352 Ulp1 protease family protein similar to... 30 1.3
At5g55080.1 68418.m06866 Ras-related GTP-binding protein, putati... 30 1.7
At3g47770.1 68416.m05204 ABC transporter family protein AbcA, Di... 30 1.7
At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transport... 30 1.7
At5g03910.1 68418.m00371 ABC transporter family protein ABC-type... 29 2.3
At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transport... 29 2.3
At3g47780.1 68416.m05205 ABC transporter family protein transpor... 29 2.3
At5g46540.1 68418.m05730 ABC transporter family protein contains... 29 3.0
At1g77410.1 68414.m09015 beta-galactosidase, putative / lactase,... 29 3.0
At5g44110.1 68418.m05397 ABC transporter family protein 29 4.0
At4g19210.1 68417.m02834 RNase L inhibitor protein, putative sim... 29 4.0
At1g03905.1 68414.m00375 ABC transporter family protein similar ... 29 4.0
At5g54840.2 68418.m06831 GTP-binding family protein similar to S... 28 5.2
At5g54840.1 68418.m06830 GTP-binding family protein similar to S... 28 5.2
At5g52210.2 68418.m06481 ADP-ribosylation factor, putative simil... 28 5.2
At5g52210.1 68418.m06480 ADP-ribosylation factor, putative simil... 28 5.2
At4g30300.1 68417.m04306 ABC transporter family protein ribonucl... 28 5.2
At3g55320.1 68416.m06144 ABC transporter family protein similar ... 28 5.2
At3g47760.1 68416.m05203 ABC transporter family protein probable... 28 5.2
At3g13640.1 68416.m01718 RNase L inhibitor protein, putative sim... 28 5.2
At2g39480.1 68415.m04845 ABC transporter family protein related ... 28 5.2
At2g07680.1 68415.m00992 ABC transporter family protein 28 5.2
At1g28010.1 68414.m03430 multidrug resistance P-glycoprotein, pu... 28 5.2
At1g27940.1 68414.m03423 multidrug resistance P-glycoprotein, pu... 28 5.2
At3g60160.1 68416.m06717 ABC transporter family protein similar ... 28 6.9
At1g20640.2 68414.m02584 RWP-RK domain-containing protein simila... 28 6.9
At1g20640.1 68414.m02583 RWP-RK domain-containing protein simila... 28 6.9
At5g59920.1 68418.m07514 DC1 domain-containing protein contains ... 27 9.2
At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3) ... 27 9.2
At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein... 27 9.2
At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein... 27 9.2
At3g47740.1 68416.m05201 ABC transporter family protein ATP bind... 27 9.2
At3g21700.3 68416.m02737 expressed protein 27 9.2
At2g16690.1 68415.m01915 hypothetical protein similar to zinc fi... 27 9.2
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 27 9.2
>At3g28360.1 68416.m03544 ABC transporter family protein similar to
P-glycoprotein homologue GI:2292907 from [Hordeum
vulgare subsp. vulgare]
Length = 1158
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 68 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
K+PS K V ++G + +GK+T+++ LQ DP +G L
Sbjct: 300 KIPSGKTVALVGGSGSGKSTVISLLQRFYDPNEGDIL 336
>At5g09930.1 68418.m01148 ABC transporter family protein
Length = 678
Score = 34.7 bits (76), Expect = 0.060
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 53 NQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
N+ N + + V ++G N GK+TL+ + G+E P +G +
Sbjct: 427 NKANLAIERGEKVAIIGPNGCGKSTLLKLIMGLEKPMRGEVI 468
>At5g64840.1 68418.m08157 ABC transporter family protein
Length = 692
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 56 QGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+ N + + + +LG N GK+TL+ + G+E P KG +
Sbjct: 442 KANLSIERGEKIAILGPNGCGKSTLLKLIMGLEKPVKGEVI 482
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 62 NTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
N PS K V V+G + +GK+T+V+ ++ DP G L
Sbjct: 387 NIFFPSGKTVAVVGGSGSGKSTVVSLIERFYDPNSGQIL 425
>At3g28415.1 68416.m03551 P-glycoprotein, putative contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1221
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +2
Query: 68 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
++PS K+V ++G + +GK+T+++ LQ DP G L
Sbjct: 362 RIPSGKSVALVGGSGSGKSTVISLLQRFYDPIVGEIL 398
>At3g28380.1 68416.m03546 P-glycoprotein, putative similar to
P-glycoprotein homologue GI:2292907 from [Hordeum
vulgare subsp. vulgare]
Length = 1240
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 68 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
K+P+ K V ++G + +GK+T+++ LQ DP G L
Sbjct: 383 KIPAGKTVALVGGSGSGKSTVISLLQRFYDPIAGEIL 419
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 68 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVRDEYRDDHTR 229
++ K+ ++G + +GK+T++ ++ DP KG+ ID RD R H R
Sbjct: 1019 EIDEGKSTAIVGTSGSGKSTIIGLIERFYDPLKGT----VKIDGRD-IRSYHLR 1067
>At3g28345.1 68416.m03541 ABC transporter family protein similar to
P-glycoprotein [Arabidopsis thaliana] GI:3849833;
contains Pfam profiles PF00005: ABC transporter,
PF00664: ABC transporter transmembrane region
Length = 1240
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 68 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
++PS K V ++G + +GK+T+++ LQ DP G L
Sbjct: 383 RVPSGKTVALVGGSGSGKSTVISLLQRFYDPLAGEIL 419
>At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1278
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +2
Query: 41 EEVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
EE+ + + +PS ++G++ +GK+T+++ ++ DPK G+ L
Sbjct: 396 EEIFDGFSLFIPSGATAALVGESGSGKSTVISLIERFYDPKSGAVL 441
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 77 SNKNVLVLGDNETGKTTLVAKLQGVEDPKKG 169
+ K V ++G++ +GK+T+++ LQ DP G
Sbjct: 1059 AGKTVALVGESGSGKSTVISLLQRFYDPDSG 1089
>At4g33460.1 68417.m04753 ABC transporter family protein ABC-type
transport protein sll1623 -Synechocystis,PIR2:S74812
Length = 271
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 68 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGS 172
++PS + ++LG N GK+TL+ L GV +P G+
Sbjct: 66 RIPSGQLWMILGPNGCGKSTLLKILAGVVNPSSGT 100
>At3g28390.1 68416.m03547 P-glycoprotein, putative similar to
P-glycoprotein homologue GI:2292907 from [Hordeum
vulgare subsp. vulgare]
Length = 1225
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 68 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
++PS K V ++G + +GK+T+++ LQ DP G L
Sbjct: 371 RVPSGKTVALVGGSGSGKSTVISLLQRFYDPIAGEIL 407
>At4g01820.1 68417.m00239 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1229
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +2
Query: 38 LEEVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+EEV + +PS ++G++ +GK+++++ ++ DP GS L
Sbjct: 362 MEEVFGGFSLLIPSGATAALVGESGSGKSSVISLIERFYDPSSGSVL 408
>At4g18050.1 68417.m02686 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter; similar to
multidrug-resistant protein CjMDR1 GI:14715462 from
[Coptis japonica]
Length = 1281
Score = 31.5 bits (68), Expect = 0.56
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+P+ K V ++G + +GK+T+++ ++ DP+ G L
Sbjct: 380 VPNGKTVALVGQSGSGKSTVISLIERFYDPESGQVL 415
Score = 31.1 bits (67), Expect = 0.74
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+PS K V ++G++ +GK+T+++ ++ +P G L
Sbjct: 1018 IPSGKTVALVGESGSGKSTVISMIERFYNPDSGKIL 1053
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 44 EVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
++ N +P+ K + ++G + +GK+T+V+ ++ DP G L
Sbjct: 384 KILNNFCLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVL 428
>At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein,
putative similar to multidrug resistant P-glycoprotein
GI:4204793 from [Solanum tuberosum]
Length = 1230
Score = 31.1 bits (67), Expect = 0.74
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 41 EEVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
EEV + +PS ++G++ +GK+T+++ ++ DP G L
Sbjct: 368 EEVFGGFSLLIPSGTTTALVGESGSGKSTVISLIERFYDPNSGQVL 413
>At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1273
Score = 31.1 bits (67), Expect = 0.74
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 41 EEVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
EE+ + + +PS ++G++ +GK+T++ ++ DPK G L
Sbjct: 383 EEIFDGFSLFIPSGATAALVGESGSGKSTVINLIERFYDPKAGEVL 428
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 77 SNKNVLVLGDNETGKTTLVAKLQGVEDPKKG 169
+ K V ++G++ +GK+T+++ LQ DP G
Sbjct: 1054 AGKTVALVGESGSGKSTVISLLQRFYDPDSG 1084
>At5g61740.1 68418.m07747 ABC transporter family protein ABC family
transporter, Entamoeba histolytica, TREMBL:EH058
Length = 848
Score = 30.7 bits (66), Expect = 0.98
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVRDEYRDDHTRLSV---- 238
+PS + +LG N GKT+ + + G+ P G+AL +D+ + +T + V
Sbjct: 554 VPSGECFGMLGPNGAGKTSFINMMTGLLKPTSGTALVQG-LDICKDMNKVYTSMGVCPQH 612
Query: 239 ---W-VLDGVQVTLIYSSLRSVR 295
W L G + L Y L++++
Sbjct: 613 DLLWGTLTGREHLLFYGRLKNIK 635
>At5g14100.1 68418.m01649 ABC transporter family protein contains
similarity to ABC transporter, ATP-binding protein
Length = 278
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 47 VQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYID 196
+ N N L L+ G + +GKTTL+ L G+ P GS Y D
Sbjct: 67 ILNGVNFSLREKSFGLIFGKSGSGKTTLLQLLAGLNKPTSGSICIQGYGD 116
>At1g35110.1 68414.m04352 Ulp1 protease family protein similar to
At5g28170, At1g44880, At3g42530, At4g19320, At5g36020,
At4g03970, At3g43010, At2g10350 ; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1311
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 110 ETGKTTLVAKLQGVEDPKKGSALEYAYIDVRDEYRDDHTRLSVWVLDGVQVTL 268
E+ T+ +L +DP +G+A ++ ++ + E D + + V +QVTL
Sbjct: 861 ESAATSHSVELPQPDDPMEGNAASHSLLETQPEVNSDGDSMKLHVYINIQVTL 913
>At5g55080.1 68418.m06866 Ras-related GTP-binding protein, putative
similar to GTP-binding protein atran3 GI:2058280 from
[Arabidopsis thaliana]
Length = 222
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 53 NQGNTKLPSNKNVLVLGDNETGKTTLVAK 139
NQ N LP+ K +L++GD TGKTT + +
Sbjct: 5 NQQNVDLPTFK-LLIVGDGGTGKTTFLKR 32
>At3g47770.1 68416.m05204 ABC transporter family protein AbcA,
Dictyostelium discoideum, U66526
Length = 900
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVRDEYRDDHTRLSV---- 238
+PS + +LG N GKT+ + + G+ P GSA +D+ + + + V
Sbjct: 612 VPSGECFGMLGPNGAGKTSFINMMTGLVKPSSGSAFVQG-LDICKDMDKVYISMGVCPQH 670
Query: 239 ---W-VLDGVQVTLIYSSLRSVRKH 301
W L G + L Y L++++ H
Sbjct: 671 DLLWETLTGKEHLLFYGRLKNLKGH 695
>At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transporter,
putative similar to multidrug-resistant protein CjMDR1
[Coptis japonica] GI:14715462, MDR-like p-glycoprotein
[Arabidopsis thaliana] GI:24324262; contains Pfam
profiles PF00005: ABC transporter, PF00664: ABC
transporter transmembrane region
Length = 1286
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 77 SNKNVLVLGDNETGKTTLVAKLQGVEDPKKG 169
+ K V ++G++ +GK+T++A LQ DP G
Sbjct: 1069 AGKTVALVGESGSGKSTVIALLQRFYDPDSG 1099
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+ S V ++G + +GK+T+V+ ++ DP+ G L
Sbjct: 409 ISSGTTVALVGQSGSGKSTVVSLIERFYDPQAGDVL 444
>At5g03910.1 68418.m00371 ABC transporter family protein ABC-type
transport protein sll1276, Synechocystis sp., PIR:S77239
Length = 634
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 62 NTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVRD 205
N + + + V ++G + GKTTL+ L + +P GS + ID++D
Sbjct: 417 NLHIKAGETVALVGPSGGGKTTLIKLLLRLYEPSSGSII-IDKIDIKD 463
>At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transporter,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]; contains Pfam
profiles PF00005: ABC transporter, PF00664: ABC
transporter transmembrane region
Length = 1292
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 77 SNKNVLVLGDNETGKTTLVAKLQGVEDPKKG 169
+ K + ++G++ +GK+T++A LQ DP G
Sbjct: 1075 AGKTIALVGESGSGKSTVIALLQRFYDPDSG 1105
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +2
Query: 41 EEVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKG 169
E++ + + S V ++G + +GK+T+V+ ++ DP+ G
Sbjct: 418 EQIFRGFSLSISSGSTVALVGQSGSGKSTVVSLIERFYDPQSG 460
>At3g47780.1 68416.m05205 ABC transporter family protein transport
protein ABC-C, Homo sapiens, PIR2:S71363
Length = 935
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVRDEYRDDHTRLSV---- 238
+PS + +LG N GKT+ + + G+ P G+AL +D+ ++ +T + V
Sbjct: 641 VPSGECFGMLGPNGAGKTSFINMMTGLLKPTSGTALVQG-LDICNDMDRVYTSMGVCPQH 699
Query: 239 ---W-VLDGVQVTLIYSSLRSVR 295
W L G + L Y L++++
Sbjct: 700 DLLWETLTGREHLLFYGRLKNLK 722
>At5g46540.1 68418.m05730 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter; similar to
multidrug-resistant protein CjMDR1 GI:14715462 from
[Coptis japonica]
Length = 1248
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+P+ V ++G + +GK+T+++ ++ DP+ G L
Sbjct: 382 VPNGMTVALVGQSGSGKSTVISLIERFYDPESGEVL 417
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+ S + V ++G++ +GK+T+++ L+ DP G L
Sbjct: 1030 ISSGQTVALVGESGSGKSTVISLLERFYDPDSGKIL 1065
>At1g77410.1 68414.m09015 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase SP:P45582 from
[Asparagus officinalis]
Length = 815
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1
Query: 350 PHGVVMATVSITRVCGNVSS 291
P G+ + TVS+T VCG+VS+
Sbjct: 687 PLGITIDTVSVTEVCGHVSN 706
>At5g44110.1 68418.m05397 ABC transporter family protein
Length = 282
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 62 NTKLPSNKNVLVLGDNETGKTTLVAKLQG 148
N LP+ L++G N +GKTTL+ L G
Sbjct: 33 NLDLPAGSRCLLVGANGSGKTTLLKILAG 61
>At4g19210.1 68417.m02834 RNase L inhibitor protein, putative
similar to 68 kDa protein HP68 GI:16755057 from
[Triticum aestivum]
Length = 605
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 89 VLVLGDNETGKTTLVAKLQGVEDP 160
+++LG+N TGKTT + L G+ P
Sbjct: 377 IVMLGENGTGKTTFIRMLAGLLKP 400
>At1g03905.1 68414.m00375 ABC transporter family protein similar to
NBD-like protein GB:AAD20643
Length = 290
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 62 NTKLPSNKNVLVLGDNETGKTTLVAKLQG 148
N LP+ L++G N +GKTTL+ L G
Sbjct: 34 NLDLPAGSRCLLVGANGSGKTTLLKILAG 62
>At5g54840.2 68418.m06831 GTP-binding family protein similar to
SP|P87027 Septum-promoting GTP-binding protein 1 (GTPase
spg1)(Sid3 protein) {Schizosaccharomyces pombe}
Length = 215
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 89 VLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVRDE--YRDDHT-RLSVWVLDG 253
+ +LGD +TGKTT V K G E+ S LE +++ D+ Y T S+W + G
Sbjct: 104 ISLLGDCQTGKTTFVVKYVGDENQ---SFLEMTGLNLMDKTFYVQGVTISFSIWDVGG 158
>At5g54840.1 68418.m06830 GTP-binding family protein similar to
SP|P87027 Septum-promoting GTP-binding protein 1 (GTPase
spg1)(Sid3 protein) {Schizosaccharomyces pombe}
Length = 288
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 89 VLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVRDE--YRDDHT-RLSVWVLDG 253
+ +LGD +TGKTT V K G E+ S LE +++ D+ Y T S+W + G
Sbjct: 104 ISLLGDCQTGKTTFVVKYVGDENQ---SFLEMTGLNLMDKTFYVQGVTISFSIWDVGG 158
>At5g52210.2 68418.m06481 ADP-ribosylation factor, putative similar
to arf-related protein (ARP) (SP:Q63055){Rattus
norvegicus}; contains Pfam domain PF00025:
ADP-ribosylation factor family
Length = 205
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 86 NVLVLGDNETGKTTLVAKLQGVEDPKKG 169
NVL+LG ++ GKTT + KL+ + +G
Sbjct: 19 NVLILGIDKAGKTTFLEKLKTIYSISEG 46
>At5g52210.1 68418.m06480 ADP-ribosylation factor, putative similar
to arf-related protein (ARP) (SP:Q63055){Rattus
norvegicus}; contains Pfam domain PF00025:
ADP-ribosylation factor family
Length = 205
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 86 NVLVLGDNETGKTTLVAKLQGVEDPKKG 169
NVL+LG ++ GKTT + KL+ + +G
Sbjct: 19 NVLILGIDKAGKTTFLEKLKTIYSISEG 46
>At4g30300.1 68417.m04306 ABC transporter family protein
ribonuclease L inhibitor - Mus musculus,PIR2:JC6555
Length = 181
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 53 NQGNTKLPSNKNVLVLGDNETGKTTLVAKLQG 148
NQG + ++ +++LG+N TGKTT + L G
Sbjct: 13 NQG--EFTDSQIIVMLGENGTGKTTFIKMLAG 42
>At3g55320.1 68416.m06144 ABC transporter family protein similar to
multidrug resistant P-glycoprotein pmdr1 GI:4204793 from
[Solanum tuberosum]
Length = 1408
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+P+ K V ++G N +GK++++ ++ DP G L
Sbjct: 439 VPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVL 474
>At3g47760.1 68416.m05203 ABC transporter family protein probable
transport protein ABC-C, Homo sapiens, PIR2:S71363
Length = 872
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVRDEYRDDHTRLSV---- 238
+PS + +LG N GKT+ + + G+ P G+A + +D+ + +T + V
Sbjct: 578 VPSGECFGMLGPNGAGKTSFINMMTGLMKPTSGAAFVHG-LDICKDMDIVYTSIGVCPQH 636
Query: 239 ---W-VLDGVQVTLIYSSLRSVR 295
W L G + L Y L++++
Sbjct: 637 DLLWETLTGREHLLFYGRLKNLK 659
>At3g13640.1 68416.m01718 RNase L inhibitor protein, putative
similar to 68 kDa protein HP68 GI:16755057 from
[Triticum aestivum]
Length = 603
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 89 VLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDV 199
+++LG+N TGKTT + L G ++G E +V
Sbjct: 377 IVMLGENGTGKTTFIRMLAGAFPREEGVQSEIPEFNV 413
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+P+ K V ++G N +GK++++ ++ DP G L
Sbjct: 437 VPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVL 472
>At2g07680.1 68415.m00992 ABC transporter family protein
Length = 1194
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 26 WSAILEEVQN----QGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
WS+ +EE N Q + ++P V V+G+ +GKT+L+ L G GS L
Sbjct: 357 WSSNVEEDYNLTIKQVSLRVPKGSFVAVIGEVGSGKTSLLNSLLGEMRCVHGSIL 411
>At1g28010.1 68414.m03430 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]
Length = 1247
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +2
Query: 62 NTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGS 172
N ++ + K++ V+G + +GK+T++ + DP G+
Sbjct: 1028 NLRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDPSNGN 1064
>At1g27940.1 68414.m03423 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein atpgp1
GI:3849833 from [Arabidopsis thaliana]
Length = 1245
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +2
Query: 62 NTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGS 172
N ++ + K++ V+G + +GK+T++ + DP G+
Sbjct: 1026 NLRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDPSNGN 1062
>At3g60160.1 68416.m06717 ABC transporter family protein similar to
ATP-binding cassette transporter MRP8 GI:18031899 from
[Arabidopsis thaliana]
Length = 1490
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 68 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGS 172
+ P K + V+G +GK+TL+ L + +P +G+
Sbjct: 1262 EFPGGKKIGVVGRTGSGKSTLIQALFRIVEPSQGT 1296
>At1g20640.2 68414.m02584 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 844
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 26 WSAILEEVQNQGNTKLPSNKNVLVLGDNE 112
W+A LEE+Q NT P N ++ G ++
Sbjct: 486 WNASLEEIQRSNNTSNPQNLGLVFDGGDK 514
>At1g20640.1 68414.m02583 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 844
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 26 WSAILEEVQNQGNTKLPSNKNVLVLGDNE 112
W+A LEE+Q NT P N ++ G ++
Sbjct: 486 WNASLEEIQRSNNTSNPQNLGLVFDGGDK 514
>At5g59920.1 68418.m07514 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 479 GSVYLCHFWTCCFLLCNLCSGV 414
GS+Y+C CCF+L C+ +
Sbjct: 402 GSIYVCEEEECCFVLHEKCANL 423
>At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3)
identical to atran3 [Arabidopsis thaliana] GI:2058280
Length = 221
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +2
Query: 53 NQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKK 166
NQ PS K V+V GD TGKTT V + E KK
Sbjct: 5 NQQTVDYPSFKLVIV-GDGGTGKTTFVKRHLTGEFEKK 41
>At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein
(RAN-2) identical to GTP-binding nuclear protein RAN-2
SP:P41917 from [Arabidopsis thaliana]
Length = 221
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +2
Query: 53 NQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKK 166
NQ PS K V+V GD TGKTT V + E KK
Sbjct: 5 NQQTVDYPSFKLVIV-GDGGTGKTTFVKRHLTGEFEKK 41
>At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein
(RAN-1) identical to GTP-binding nuclear protein RAN-1
SP:P41916 from [Arabidopsis thaliana]
Length = 221
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +2
Query: 53 NQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKK 166
NQ PS K V+V GD TGKTT V + E KK
Sbjct: 5 NQQTVDYPSFKLVIV-GDGGTGKTTFVKRHLTGEFEKK 41
>At3g47740.1 68416.m05201 ABC transporter family protein ATP binding
cassette transporter ABC1, Homo sapiens, PIR2:A54774
Length = 947
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSA 175
+PS + +LG N GKT+ + + G+ P G+A
Sbjct: 653 VPSGECFGMLGPNGAGKTSFINMMTGLVKPTSGAA 687
>At3g21700.3 68416.m02737 expressed protein
Length = 292
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 89 VLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVRDE--YRDD-HTRLSVWVLDGVQ 259
+ +LGD E GKT+ +AK G E + LE I+ D+ Y S+W L+G +
Sbjct: 109 ISLLGDPEIGKTSFLAKYVGEEKEVEMRELEKG-INCTDKTLYMGGARISYSIWELEGAE 167
>At2g16690.1 68415.m01915 hypothetical protein similar to zinc
finger protein [Arabidopsis thaliana] GI:976277
Length = 240
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 221 HTRLSVWVLDGVQVTLIYSSLRSV 292
H R+S W+LD ++ IYS +R V
Sbjct: 47 HQRMSNWILDMPRIWRIYSRVRGV 70
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 80 NKNVLVLGDNETGKTTLVAKL 142
N+ VL++G+ TGKTTLV L
Sbjct: 667 NEPVLLVGETGTGKTTLVQNL 687
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,713,930
Number of Sequences: 28952
Number of extensions: 307392
Number of successful extensions: 1125
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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