Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20860
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    27   0.73 
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    24   3.9  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   5.1  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     23   6.8  

>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -2

Query: 393 LEPGLCXPTVCHGPQRGLRG*TRSQRCP*CVATVSRGLDCCPGGLXCFAH 244
           L+P L   T+C G   G+    ++Q C  C A V  GL+C       FA+
Sbjct: 4   LKPILSYVTLC-GEVTGVSYRGQAQTCRNCAAPVHHGLNCVQNRQNRFAN 52


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 18/85 (21%), Positives = 33/85 (38%)
 Frame = +1

Query: 277 IQPSRNCCHTSRATLASCSPAETSLRSVTNCWXTKSRLQLVPVPLPHCQSSFPPTTPASV 456
           +Q   N  H  +  L   S A ++  +        +       P P   +S PP+T  + 
Sbjct: 39  LQAQLNLVHQQQLALEQQSAAISTNTAAPGTAGPNAATVTAATPQPPA-ASMPPSTTTNT 97

Query: 457 QRKPLSSKLFPSLPKFQRYY*NHQR 531
           Q   + S    +  + Q+++  HQR
Sbjct: 98  QIPSMVSAAGSTQQQHQQHHHQHQR 122


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -3

Query: 308 DVWQQFLEGWIVVQVVFXALRIIVFFPMST 219
           D++ Q  E W  V +V   L++ +FF ++T
Sbjct: 461 DLYIQTREDWKYVAMVIDRLQLYIFFIVTT 490


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 437 GGNDD*QWGNGTGTSWSLDFVXQQFV-TDLNEVSAGEH 327
           GGND  +W +  G +W L    + FV  D ++   G++
Sbjct: 287 GGNDALRWLSNFGEAWRLLASREAFVFVDNHDNQRGDY 324


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,169
Number of Sequences: 2352
Number of extensions: 15695
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)