Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20817
         (796 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.40 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.8  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    23   2.8  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   3.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.9  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   6.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 594 YGSFQLFNKILLLM*RTGYCIYFHALLVCSLLHFCYYI 707
           Y +F LF   LLL+    Y  Y H L  C+ + F  ++
Sbjct: 242 YYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHL 279


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 606  QLFNKILLLM*RTGYCIYFHALLVCSLLH 692
            +L  K +++M  +G  I+   + +CSL+H
Sbjct: 1151 KLVIKAIIIMILSGCIIFTEGIWICSLIH 1179


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 88  TCENFRALCTGEK 126
           T ++FR LCTG K
Sbjct: 408 TLDDFRGLCTGNK 420


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +1

Query: 172 FMLQGGDFTNHNGTGGKSIYGNKF-EDENSPLSTLD 276
           F + GGDF    G+G   +YG  +   EN  L T++
Sbjct: 78  FWIHGGDFV--TGSGTSEMYGPDYLMSENVVLVTIN 111


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 185 EGTSPTITALGESPSTAISLKTRIHP*AHWTWR 283
           E T  + T+   SPST   L T   P  H+T++
Sbjct: 122 ESTVSSSTSSIPSPSTTDDLSTNPTPPPHYTYQ 154


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 262 LSTLDLASSPWLMPV 306
           +ST+DL SS W +P+
Sbjct: 391 MSTIDLRSSYWQIPL 405


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -2

Query: 120 ASAQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDVE-EY 10
           A   G    ++L + + S   + FSQWG    D++ EY
Sbjct: 110 AILNGIVASSKLRASLISSCLSFFSQWGYDGIDIDWEY 147


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 196 TNHNGTGGKSIYGNKFEDENSPLSTLDLA 282
           T+H G    S+  N + D +S  S LD++
Sbjct: 174 THHGGIKSDSVTSNAWWDVHSTGSWLDMS 202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,212
Number of Sequences: 336
Number of extensions: 4633
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)