Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20800
         (627 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g74030.1 68414.m08573 enolase, putative similar to Swiss-Prot...    97   8e-21
At2g36530.1 68415.m04481 enolase identical to SWISS-PROT:P25696 ...    74   7e-14
At2g29560.1 68415.m03590 enolase, putative similar to enolase [S...    73   1e-13
At3g55110.1 68416.m06120 ABC transporter family protein ATP-bind...    30   1.1  
At3g45940.1 68416.m04971 alpha-xylosidase, putative strong simil...    29   2.5  
At1g64050.1 68414.m07255 expressed protein                             28   4.4  

>At1g74030.1 68414.m08573 enolase, putative similar to
           Swiss-Prot:P15007 enolase (EC 4.2.1.11)
           (2-phosphoglycerate dehydratase)(2-phospho-D- glycerate
           hydro-lyase) [Drosophila melanogaster]
          Length = 477

 Score = 97.1 bits (231), Expect = 8e-21
 Identities = 50/83 (60%), Positives = 59/83 (71%)
 Frame = +3

Query: 258 KSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILG 437
           KS Y GKGVL AIKNINEL+AP+L    ++V  Q ++D LML+LDGT NKSKLGANAILG
Sbjct: 101 KSVYGGKGVLQAIKNINELVAPKLI--GVDVRNQADVDALMLELDGTPNKSKLGANAILG 158

Query: 438 VSLXXXXXXXXXXNVPLYKHLAD 506
           VSL           VPLYKH+ +
Sbjct: 159 VSLSVCRAGAGAKGVPLYKHIQE 181



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 37/49 (75%), Positives = 45/49 (91%)
 Frame = +1

Query: 106 IKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRD 252
           +K +KARQI DSRGNPTVEVDL+T+  L+R+AVPSGASTG++EALELRD
Sbjct: 51  VKGVKARQIIDSRGNPTVEVDLITD-DLYRSAVPSGASTGIYEALELRD 98



 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = +2

Query: 509 AGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGAS 625
           +G  ++V+PVPAFNVINGGSHAGN LAMQEFMI P GA+
Sbjct: 183 SGTKELVMPVPAFNVINGGSHAGNSLAMQEFMILPVGAT 221


>At2g36530.1 68415.m04481 enolase identical to SWISS-PROT:P25696
           enolase (EC 4.2.1.11) (2-phosphoglycerate
           dehydratase)(2-phospho-D- glycerate hydro-lyase)
           [Arabidopsis thaliana]
          Length = 444

 Score = 74.1 bits (174), Expect = 7e-14
 Identities = 34/39 (87%), Positives = 35/39 (89%)
 Frame = +2

Query: 509 AGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGAS 625
           AGN  IVLPVPAFNVINGGSHAGNKLAMQEFMI P GA+
Sbjct: 143 AGNPKIVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAA 181



 Score = 73.7 bits (173), Expect = 9e-14
 Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
 Frame = +1

Query: 106 IKSIKARQIFDSRGNPTVEVDLVTELGL-FRAAVPSGASTGVHEALELRD 252
           I  +KARQIFDSRGNPTVEVD+ T  G+   AAVPSGASTG++EALELRD
Sbjct: 4   ITVVKARQIFDSRGNPTVEVDIHTSNGIKVTAAVPSGASTGIYEALELRD 53



 Score = 70.9 bits (166), Expect = 6e-13
 Identities = 42/89 (47%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
 Frame = +3

Query: 261 SEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELML-KLDGTEN-----KSKLGA 422
           S+Y GKGV  A+ N+N +I P L     + TQQ  ID  M+ +LDGT+N     K KLGA
Sbjct: 56  SDYLGKGVSKAVGNVNNIIGPALI--GKDPTQQTAIDNFMVHELDGTQNEWGWCKQKLGA 113

Query: 423 NAILGVSLXXXXXXXXXXNVPLYKHLADL 509
           NAIL VSL           +PLYKH+A+L
Sbjct: 114 NAILAVSLAVCKAGAVVSGIPLYKHIANL 142


>At2g29560.1 68415.m03590 enolase, putative similar to enolase
           [Spinacia oleracea] gi|8919731|emb|CAB96173
          Length = 475

 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 35/50 (70%), Positives = 41/50 (82%)
 Frame = +1

Query: 103 VIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRD 252
           VI  +KARQI DSRG PTVEVDL T  G+FRA+VPSG S+G +EA+ELRD
Sbjct: 46  VITKVKARQILDSRGIPTVEVDLHTNKGVFRASVPSGDSSGTYEAIELRD 95



 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 39/84 (46%), Positives = 49/84 (58%)
 Frame = +3

Query: 258 KSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILG 437
           K  Y G  V  A+KNINE I+  L    ++   Q +ID+ M+ LD TE KS+LGANAIL 
Sbjct: 98  KGMYLGNSVAKAVKNINEKISEALI--GMDPKLQGQIDQAMIDLDKTEKKSELGANAILA 155

Query: 438 VSLXXXXXXXXXXNVPLYKHLADL 509
           VS+           VPL KHL+DL
Sbjct: 156 VSIAACKAGAAEKEVPLCKHLSDL 179



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 25/60 (41%), Positives = 36/60 (60%)
 Frame = +2

Query: 446 SCC*GWCCQEKCSAVQALG*FAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGAS 625
           + C     +++    + L   +G  ++VLPVPAF V++GG HA N  A+QE MI P GAS
Sbjct: 159 AACKAGAAEKEVPLCKHLSDLSGRANMVLPVPAFTVLSGGKHASNTFAIQEIMILPIGAS 218


>At3g55110.1 68416.m06120 ABC transporter family protein ATP-binding
           cassette-sub-family G-member 2, Mus musculus,
           EMBL:AF140218
          Length = 708

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +1

Query: 133 FDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDKSRVNIMAREF*PQSKISM 309
           F S G P  E + +TE  L       G+S G  + +E  +K + N  AR    QS++S+
Sbjct: 308 FSSFGRPIPEKENITEFALDVIRELEGSSEGTRDLVEFNEKWQQNQTARAT-TQSRVSL 365


>At3g45940.1 68416.m04971 alpha-xylosidase, putative strong
           similarity to alpha-xylosidase precursor GI:4163997 from
           [Arabidopsis thaliana]
          Length = 868

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 530 LPVPAFNVINGGSHAGNKLAMQEFMIFPTGAS 625
           LP P FNV+N   +    L MQ+ + FP GAS
Sbjct: 690 LPAP-FNVVNVHLYQNAILPMQQVVAFPAGAS 720


>At1g64050.1 68414.m07255 expressed protein
          Length = 668

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 227 TPVEAPEGTAARNKPSSVTRSTSTVGLPRESKI 129
           +P+ +PE   +  K   ++RS+S  G PR +K+
Sbjct: 107 SPIASPESAESPRKRGKLSRSSSGNGTPRRTKL 139


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,839,659
Number of Sequences: 28952
Number of extensions: 238499
Number of successful extensions: 571
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)