Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20750
(777 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 155 2e-38
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 85 5e-17
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 83 2e-16
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 77 1e-14
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 73 2e-13
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 69 3e-12
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 64 7e-11
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 55 5e-08
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 52 4e-07
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 52 4e-07
At5g18820.1 68418.m02236 chaperonin, putative similar to SWISS-P... 36 0.030
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 34 0.091
At1g26230.1 68414.m03200 chaperonin, putative similar to SWISS-P... 34 0.091
At3g13860.1 68416.m01751 chaperonin, putative similar to SWISS-P... 34 0.12
At2g33210.1 68415.m04069 chaperonin, putative similar to SWISS-P... 34 0.12
At5g56500.1 68418.m07051 chaperonin, putative similar to SWISS-P... 33 0.16
At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to... 33 0.16
At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta su... 33 0.28
At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta su... 33 0.28
At3g13470.1 68416.m01695 chaperonin, putative similar SWISS-PROT... 32 0.37
At1g78950.1 68414.m09204 beta-amyrin synthase, putative similar ... 32 0.37
At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit, pu... 30 1.5
At4g02860.1 68417.m00386 phenazine biosynthesis PhzC/PhzF family... 30 2.0
At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-contain... 29 4.5
At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-contain... 29 4.5
At4g16530.1 68417.m02502 expressed protein contains Pfam profile... 29 4.5
At1g16560.3 68414.m01985 Per1-like family protein contains Pfam ... 28 6.0
At1g16560.2 68414.m01984 Per1-like family protein contains Pfam ... 28 6.0
At1g16560.1 68414.m01983 Per1-like family protein contains Pfam ... 28 6.0
At3g21770.1 68416.m02746 peroxidase 30 (PER30) (P30) (PRXR9) ide... 28 7.9
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 155 bits (377), Expect = 2e-38
Identities = 87/169 (51%), Positives = 111/169 (65%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSP 435
EVGDGTT+VV+LA E LK KPF+E+GVH + LIR+ RTAS LAI K+KE AV I+ KS
Sbjct: 92 EVGDGTTTVVLLAAEFLKEAKPFIEDGVHAQNLIRSYRTASTLAIAKVKELAVSIEGKSV 151
Query: 436 EEQRDLLLKCASTAMSSKLIHQQKATSXXXXXXXXXXXXXHFCLST*LESKRFPVELLKT 615
EE++ LL KCA+T +SSKLI +K L+ + K+ P ++
Sbjct: 152 EEKKGLLAKCAATTLSSKLIGGEKEFFATMVVDAVMAIGNDDRLNL-IGIKKVPGGNMRD 210
Query: 616 RSWYLVWAFKKTFSYAGFEMQPKTYKDCKIALLNIELELKAERDNAEVR 762
AFKKTFSYAGFE QPK + + KI LLNIELELK+E++NAE+R
Sbjct: 211 SFLVDGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIR 259
Score = 139 bits (336), Expect = 2e-33
Identities = 67/87 (77%), Positives = 73/87 (83%)
Frame = +2
Query: 2 PQILLLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGA 181
PQI+LL+EGTD +QGK QLVSNINAC V D VRTTLGPRGMDKLI D G ISNDGA
Sbjct: 7 PQIILLKEGTDTSQGKAQLVSNINACTAVGDVVRTTLGPRGMDKLIHDDKGSVTISNDGA 66
Query: 182 TIMKLLDIIHPAAKTLVDIAKSQDARL 262
TIMKLLDI+HPAAK LVDIAKSQD+ +
Sbjct: 67 TIMKLLDIVHPAAKILVDIAKSQDSEV 93
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +3
Query: 513 FSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFLVPGVGFQENF 653
F+ +VVDAV+++ L++IGIKKVPGG + DSFLV GV F++ F
Sbjct: 178 FATMVVDAVMAIGNDDR-LNLIGIKKVPGGNMRDSFLVDGVAFKKTF 223
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 85.0 bits (201), Expect = 5e-17
Identities = 36/65 (55%), Positives = 54/65 (83%)
Frame = +2
Query: 62 SNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIA 241
+NIN+ + V DAVRT+LGP+GMDK+I NG+ +I+NDGATI+ ++++ PAAK LV+++
Sbjct: 32 ANINSARAVSDAVRTSLGPKGMDKMISTANGEVIITNDGATILNKMEVLQPAAKMLVELS 91
Query: 242 KSQDA 256
KSQD+
Sbjct: 92 KSQDS 96
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/80 (37%), Positives = 50/80 (62%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 441
GDGTT+VV++AG +LK + + G+HP V+ ++ A AI+ + AV ++
Sbjct: 99 GDGTTTVVVIAGALLKECQSLLTNGIHPTVISDSLHKACGKAIDILTAMAVPVE----LT 154
Query: 442 QRDLLLKCASTAMSSKLIHQ 501
RD L+K AST+++SK++ Q
Sbjct: 155 DRDSLVKSASTSLNSKVVSQ 174
>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
TCP-1-alpha / chaperonin (CCT1) identical to
SWISS-PROT:P28769- T-complex protein 1, alpha subunit
(TCP-1-alpha) [Arabidopsis thaliana]
Length = 545
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/74 (48%), Positives = 54/74 (72%)
Frame = +2
Query: 32 DQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIH 211
D+ G+ N+ ACQ V + V+T+LGP G+DK++VD G I+NDGATI+++L++ H
Sbjct: 13 DRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEH 72
Query: 212 PAAKTLVDIAKSQD 253
PAAK LV++A+ QD
Sbjct: 73 PAAKVLVELAELQD 86
Score = 64.5 bits (150), Expect = 7e-11
Identities = 37/80 (46%), Positives = 49/80 (61%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSP 435
EVGDGTTSVVI+A E+LKR V +HP +I R A R + + I+E K+ K
Sbjct: 88 EVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEE---KLVTKVE 144
Query: 436 EEQRDLLLKCASTAMSSKLI 495
+ + L+ CA T+MSSKLI
Sbjct: 145 KLGKVPLINCAKTSMSSKLI 164
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/82 (40%), Positives = 55/82 (67%)
Frame = +2
Query: 8 ILLLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATI 187
+L+L + + G NI A + V D +RTTLGPR M K+++D G V++NDG I
Sbjct: 5 VLVLSDSLKRESGSKVHHGNIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTNDGNAI 64
Query: 188 MKLLDIIHPAAKTLVDIAKSQD 253
++ LD+ HPAAK++++++++QD
Sbjct: 65 LRELDVAHPAAKSMIELSRTQD 86
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/78 (38%), Positives = 45/78 (57%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSP 435
EVGDGTTSV++LAGE+L + F+E+ HP V+ RA A +I + + A+ ID
Sbjct: 88 EVGDGTTSVIVLAGEMLHVAEAFLEKNYHPTVICRAYIKALEDSIAVLDKIAMSIDINDR 147
Query: 436 EEQRDLLLKCASTAMSSK 489
+ L+ C T +S+
Sbjct: 148 SQVLGLVKSCIGTKFTSQ 165
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 576 IGIKKVPGGALEDSFLVPGVGFQEN 650
I ++KVPGG EDS ++ GV F ++
Sbjct: 198 IKVEKVPGGQFEDSEVLKGVMFNKD 222
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +2
Query: 14 LLREGTDQTQGKPQ-LVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIM 190
+L+EG G + ++ NI AC+ + RT+LGP GM+K++++H K ++ND ATI+
Sbjct: 14 MLKEGYRHLSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 73
Query: 191 KLLDIIHPAAKTLVDIAKSQDARL 262
L+I HPAAK LV AK+Q +
Sbjct: 74 NELEIQHPAAKLLVLAAKAQQEEI 97
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +1
Query: 241 KVSRCEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKI 420
K + E+GDG + AGE+L+ + + G+HP +I A A+E I EQ V+
Sbjct: 91 KAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEIISGYTKAVSKAVE-ILEQLVET 149
Query: 421 DNKSPE-EQRDLLLKCASTAMSSKLIHQQK 507
+++ + +D ++ A++SK Q++
Sbjct: 150 GSETMDVRNKDEVISRMRAAVASKQFGQEE 179
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 68.9 bits (161), Expect = 3e-12
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +1
Query: 241 KVSRCEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKI 420
KV EVGDGTTSVV+LAGE+L+ + V +HP +I R AS A + ++ I
Sbjct: 84 KVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGYRMASECARNALLKRV--I 141
Query: 421 DNK-SPEEQRDLLLKCASTAMSSKLIHQQK 507
DNK + E+ R LLK A T + SK++ Q K
Sbjct: 142 DNKDNAEKFRSDLLKIAMTTLCSKILSQDK 171
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +2
Query: 14 LLREGTDQTQGKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHN-GKAV-ISNDGATI 187
+ ++ + +G+ +++ + D V++TLGP+GMDK++ G AV ++NDGATI
Sbjct: 6 IFKDDASEEKGERARMASFVGAMAISDLVKSTLGPKGMDKILQSTGRGHAVTVTNDGATI 65
Query: 188 MKLLDIIHPAAKTLVDIAKSQD 253
+K L I +PAAK LVDI+K QD
Sbjct: 66 LKSLHIDNPAAKVLVDISKVQD 87
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +3
Query: 495 SSTEGHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFLVPG 632
S + HF+++ VDAV L L+ I I K PGG+L+DSFL G
Sbjct: 168 SQDKEHFAEMAVDAVFRLKGST-NLEAIQIIKKPGGSLKDSFLDEG 212
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 64.5 bits (150), Expect = 7e-11
Identities = 32/83 (38%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Frame = +2
Query: 11 LLLREGTDQTQ--GKPQLVSNINACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGAT 184
++LRE +T+ G +NI A + V +R++LGP+GMDK++ +G I+NDGAT
Sbjct: 13 IILREQDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGAT 72
Query: 185 IMKLLDIIHPAAKTLVDIAKSQD 253
I++ +D+ + AK +V++++SQD
Sbjct: 73 ILEQMDVDNQIAKLMVELSRSQD 95
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/84 (32%), Positives = 51/84 (60%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSP 435
E+GDGTT VV++AG +L++ + ++ G+HP + ASR+A+E ++ A K +
Sbjct: 97 EIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVAVEHLERIAQKFE--FD 154
Query: 436 EEQRDLLLKCASTAMSSKLIHQQK 507
+ L++ T +SSK++++ K
Sbjct: 155 VNNYEPLVQTCMTTLSSKIVNRCK 178
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/84 (32%), Positives = 51/84 (60%)
Frame = +1
Query: 256 EVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSP 435
E+GDGTT VV++AG +L++ + ++ G+HP + ASR+A+E ++ A K +
Sbjct: 21 EIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVAVEHLERIAQKFE--FD 78
Query: 436 EEQRDLLLKCASTAMSSKLIHQQK 507
+ L++ T +SSK++++ K
Sbjct: 79 VNNYEPLVQTCMTTLSSKIVNRCK 102
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 441
GDGTTS VI GE++K+ + ++EG+HPRVL+ A R ++ + + E
Sbjct: 88 GDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLDNFKTPV-VMGDEV 146
Query: 442 QRDLLLKCASTAMSSKL 492
+++L A T + +KL
Sbjct: 147 DKEILKMVARTTLRTKL 163
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 68 INACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKS 247
INA + + D +++ LGP+G K++V +G ++ DG T++K + I +P A + A +
Sbjct: 23 INAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVA 82
Query: 248 QD 253
QD
Sbjct: 83 QD 84
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 441
GDGTTS VI GE++K+ + ++EG+HPRVL+ A R ++ + + E
Sbjct: 88 GDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLDTFKTPV-VMGDEP 146
Query: 442 QRDLLLKCASTAMSSKL 492
+++L A T + +KL
Sbjct: 147 DKEILKMVARTTLRTKL 163
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 68 INACQIVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKS 247
INA + + D +++ LGP+G K++V +G ++ DG T++K + I +P A + A +
Sbjct: 23 INAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVA 82
Query: 248 QD 253
QD
Sbjct: 83 QD 84
>At5g18820.1 68418.m02236 chaperonin, putative similar to
SWISS-PROT:P08926- RuBisCO subunit binding-protein alpha
subunit, chloroplast precursor (60 kDa chaperonin alpha
subunit, CPN-60 alpha)[Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 575
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +2
Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMK---LLDIIHPAAKTLV 232
+ DAV TLGPRG + ++ + + VI NDG TI K L D I A TL+
Sbjct: 55 LADAVSITLGPRGRNVVLAEKDTIKVI-NDGVTIAKSIELPDTIENAGATLI 105
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 34.3 bits (75), Expect = 0.091
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI 205
+ D V TLGPRG + +++D G + NDG TI + +++
Sbjct: 68 LADCVGLTLGPRGRN-VVLDEFGSPKVVNDGVTIARAIEL 106
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQA 411
GDGTT+ ILA EI+K V G +P L R + + IE+++++A
Sbjct: 130 GDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVQGLIEELQKKA 179
>At1g26230.1 68414.m03200 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 611
Score = 34.3 bits (75), Expect = 0.091
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 83 IVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAKSQDAR 259
+V + TLGP+G + ++ + G I NDG T++K +++ P V + + A+
Sbjct: 61 MVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGETVLKEIELEDPLENVGVKLVRQAGAK 119
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/55 (21%), Positives = 30/55 (54%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDN 426
GDG+T+ +ILA ++ + G +P + R + ++ + ++K + +I++
Sbjct: 125 GDGSTTSIILAHGLITEGIKVISAGTNPIQVARGIEKTTKALVLELKSMSREIED 179
>At3g13860.1 68416.m01751 chaperonin, putative similar to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana] ; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 572
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPAAKTLVDIAK 244
V +AV+ T+GP+G + +I G I+ DG T+ K + A ++ K
Sbjct: 53 VAEAVKVTMGPKGRNVIIESSYGGPKITKDGVTVAKSISFQAKAKNIGAELVK 105
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 441
GDGTT +L IL V GV+ L + A + +K +AV I +PEE
Sbjct: 116 GDGTTCATVLTQAILIEGCKSVAAGVNVMDLRVGINMAIAAVVSDLKSRAVMI--STPEE 173
>At2g33210.1 68415.m04069 chaperonin, putative similar to
SWISS-PROT:Q05046- chaperonin CPN60-2, mitochondrial
precursor (HSP60-2) [Cucurbita maxima]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 585
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLD 202
+ DAV+ T+GP+G + +I G ++ DG T+ K ++
Sbjct: 54 LADAVKVTMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIE 92
>At5g56500.1 68418.m07051 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 597
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/55 (23%), Positives = 32/55 (58%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDN 426
GDGTT+ V+LA ++ V G +P ++ R + ++ + ++K+ + ++++
Sbjct: 137 GDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVAELKKMSKEVED 191
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 214
+ D V TLGP+G + ++ G I NDG T+ + +++ P
Sbjct: 74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 116
>At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana]
Length = 577
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLD 202
+ DAV+ T+GP+G + +I G ++ DG T+ K ++
Sbjct: 53 LADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIE 91
>At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDN 426
GDGTT+ V+LA + V G +P ++ R + ++ + ++K+ + ++++
Sbjct: 141 GDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKEVED 195
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 214
+ D V TLGP+G + ++ G I NDG T+ + +++ P
Sbjct: 78 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 120
>At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDN 426
GDGTT+ V+LA + V G +P ++ R + ++ + ++K+ + ++++
Sbjct: 141 GDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKEVED 195
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 214
+ D V TLGP+G + ++ G I NDG T+ + +++ P
Sbjct: 78 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 120
>At3g13470.1 68416.m01695 chaperonin, putative similar
SWISS-PROT:P21240- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Arabidopsis thaliana]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 596
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 86 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 214
+ D V TLGP+G + ++ G I NDG T+ + +++ P
Sbjct: 74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 116
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +1
Query: 262 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDN 426
GDGTT+ V+LA + V G +P ++ R + ++ + ++K + ++++
Sbjct: 137 GDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVNELKLMSKEVED 191
>At1g78950.1 68414.m09204 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 759
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +1
Query: 598 VELLKTR--SWYLVWAFKKT----FSYAGFEMQPKTYKDCKIALLNIELELKAERDN 750
+E ++TR SWY W T F+ AG KT+ DC+ ++ L A++DN
Sbjct: 599 LENMQTRDGSWYGNWGICFTYGTWFALAGLAAAGKTFNDCEAIRKGVQFLLAAQKDN 655
>At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative similar to chaperonin containing TCP-1 (CCT)
epsilon subunit [Tetrahymena pyriformis] GI:15824416,
SP|P80316 T-complex protein 1, epsilon subunit
(TCP-1-epsilon) (CCT-epsilon) {Mus musculus}
Length = 142
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +2
Query: 11 LLLREGTDQTQ--GKPQLVSNINACQIVVDAVRTTLGPRGMDK 133
++LRE +T+ G +NI+A + V +R++LGP+GM+K
Sbjct: 13 IILREQDQKTRLKGIDAQKANISAGKAVARILRSSLGPKGMEK 55
>At4g02860.1 68417.m00386 phenazine biosynthesis PhzC/PhzF family
protein contains Pfam profile: PF02567 phenazine
biosynthesis-like protein
Length = 294
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 609 EDSFLVPGVGFQENFQLRWL*DAAE 683
E FL+P GFQ F LRW AE
Sbjct: 52 ETCFLIPITGFQARFSLRWFTPLAE 76
>At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 870
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 438 GTKRSPIEVCINSDVIETDSSTEGHFSKIVVDAVLSLDTPLLP 566
G R P I TDS KI VD + S+D+P +P
Sbjct: 757 GNSRQPSRKQIPESTNTTDSKISEESGKISVDKLSSIDSPSIP 799
>At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 822
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 438 GTKRSPIEVCINSDVIETDSSTEGHFSKIVVDAVLSLDTPLLP 566
G R P I TDS KI VD + S+D+P +P
Sbjct: 757 GNSRQPSRKQIPESTNTTDSKISEESGKISVDKLSSIDSPSIP 799
>At4g16530.1 68417.m02502 expressed protein contains Pfam profile
PF04510: Family of unknown function (DUF577)
Length = 774
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 304 LKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQ 444
LKR P E+G V+ AV ++ + +E ++ + K + + EE+
Sbjct: 616 LKRASPEAEKGKDEAVVAAAVVKSTAVVVESVESEEPKTEKEEDEER 662
>At1g16560.3 68414.m01985 Per1-like family protein contains Pfam
profile PF04080: Per1-like
Length = 342
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +1
Query: 73 CLSNCC--RCGQNHPGSPWYGQADCRSQWK 156
C+ C +C + G PWY Q QWK
Sbjct: 43 CVGQLCFPQCNSSSDGGPWYIQEPLYLQWK 72
>At1g16560.2 68414.m01984 Per1-like family protein contains Pfam
profile PF04080: Per1-like
Length = 342
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +1
Query: 73 CLSNCC--RCGQNHPGSPWYGQADCRSQWK 156
C+ C +C + G PWY Q QWK
Sbjct: 43 CVGQLCFPQCNSSSDGGPWYIQEPLYLQWK 72
>At1g16560.1 68414.m01983 Per1-like family protein contains Pfam
profile PF04080: Per1-like
Length = 342
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +1
Query: 73 CLSNCC--RCGQNHPGSPWYGQADCRSQWK 156
C+ C +C + G PWY Q QWK
Sbjct: 43 CVGQLCFPQCNSSSDGGPWYIQEPLYLQWK 72
>At3g21770.1 68416.m02746 peroxidase 30 (PER30) (P30) (PRXR9)
identical to SP|Q9LSY7 Peroxidase 30 precursor (EC
1.11.1.7) (Atperox P30) (PRXR9) (ATP7a) {Arabidopsis
thaliana}
Length = 329
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -2
Query: 410 ACSLIFSMASLDAVLTALIRTRG*TPSSTNGFNLFRISPANITTEVVPSPTSHLETLQ 237
+C+ I ++ + DAV + T G + S G RIS T +P PTS+ TLQ
Sbjct: 121 SCADIIALTARDAV----VATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQ 174
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,367,005
Number of Sequences: 28952
Number of extensions: 378180
Number of successful extensions: 1111
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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