Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20037
(718 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 159 2e-39
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 153 1e-37
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 2e-37
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 124 5e-29
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 81 1e-15
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 68 7e-12
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 62 4e-10
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.2
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 30 1.6
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.2
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 2.8
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 29 2.8
SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 2.8
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 2.8
SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14) 29 3.8
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 3.8
SB_57167| Best HMM Match : Ribosomal_MRP8 (HMM E-Value=3) 29 5.0
SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 6.6
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 6.6
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 6.6
SB_41979| Best HMM Match : rve (HMM E-Value=1.3e-23) 28 8.7
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) 28 8.7
SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 159 bits (387), Expect = 2e-39
Identities = 71/84 (84%), Positives = 80/84 (95%)
Frame = +2
Query: 2 GTRRNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKY 181
G RNVLI+DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KY
Sbjct: 190 GVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKY 249
Query: 182 KKDLATNKRALRRLRTACERAKRT 253
KKD+ NKRA+RRLRTACERAKRT
Sbjct: 250 KKDITPNKRAMRRLRTACERAKRT 273
Score = 141 bits (341), Expect = 6e-34
Identities = 69/90 (76%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM--DK 417
K LSSSTQASIEIDSLFEGIDFYTSITRARFEELN DLF+ T EPVE+++RD+K+ K
Sbjct: 271 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGGK 330
Query: 418 AQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 507
IHDIVLVGGSTRIPK+QK+LQ+ F GKE
Sbjct: 331 ESIHDIVLVGGSTRIPKIQKMLQELFGGKE 360
Score = 81.0 bits (191), Expect = 9e-16
Identities = 41/72 (56%), Positives = 45/72 (62%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K NKSINPDE ILHGDK + V+D GIETAGGVM+ LIKR
Sbjct: 359 KELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLDVAPLSMGIETAGGVMSVLIKR 418
Query: 681 NTTIPTKQTQTF 716
N+TIPTKQTQTF
Sbjct: 419 NSTIPTKQTQTF 430
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 153 bits (372), Expect = 1e-37
Identities = 71/82 (86%), Positives = 78/82 (95%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKK 187
+NVLIFDLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKK
Sbjct: 193 KNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKK 252
Query: 188 DLATNKRALRRLRTACERAKRT 253
D++ N RA+RRLRTACERAKRT
Sbjct: 253 DMSKNSRAMRRLRTACERAKRT 274
Score = 131 bits (316), Expect = 6e-31
Identities = 58/87 (66%), Positives = 76/87 (87%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K LSSST+ASIE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV K+L DAK K+
Sbjct: 272 KRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKSD 331
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFFNGK 504
IH++VLVGGSTR+PK+QK+L+++F+GK
Sbjct: 332 IHEVVLVGGSTRVPKIQKMLEEYFSGK 358
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/72 (54%), Positives = 42/72 (58%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K NKSINPDE IL GDKS+EV+D GIETAG VMT LI+R
Sbjct: 358 KSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVDVAPLSLGIETAGEVMTKLIER 417
Query: 681 NTTIPTKQTQTF 716
N IPTK TQTF
Sbjct: 418 NARIPTKATQTF 429
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 153 bits (370), Expect = 2e-37
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +2
Query: 2 GTRRNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKY 181
G RNVLIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++FK+KY
Sbjct: 283 GQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKY 342
Query: 182 KKDLATNKRALRRLRTACERAKRT 253
KKD+ NKRALRRLRTACERAKRT
Sbjct: 343 KKDITPNKRALRRLRTACERAKRT 366
Score = 138 bits (335), Expect = 3e-33
Identities = 65/89 (73%), Positives = 81/89 (91%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD-KA 420
K LSSSTQASIEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPVEK+++D+K++ K
Sbjct: 364 KRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESKE 423
Query: 421 QIHDIVLVGGSTRIPKVQKLLQDFFNGKE 507
+I +IV+VGGSTRIPK+Q LLQ+FFNGKE
Sbjct: 424 KIDEIVMVGGSTRIPKIQSLLQNFFNGKE 452
Score = 84.2 bits (199), Expect = 9e-17
Identities = 43/72 (59%), Positives = 44/72 (61%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K NKSINPDE ILHGDKSE QD G+ETAGGVMT IKR
Sbjct: 451 KELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLLLLDVAPLTLGLETAGGVMTAAIKR 510
Query: 681 NTTIPTKQTQTF 716
NTTIPTKQTQTF
Sbjct: 511 NTTIPTKQTQTF 522
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 124 bits (300), Expect = 5e-29
Identities = 58/91 (63%), Positives = 74/91 (81%)
Frame = +1
Query: 238 EGKEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 417
+ K LS+ QA +EI+S FEG DF +TRARFEELNA LF+ST++PV+K L DA + K
Sbjct: 966 KAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKK 1025
Query: 418 AQIHDIVLVGGSTRIPKVQKLLQDFFNGKEP 510
++IH+IVLVGGSTRIPKVQ+L++DFF GKEP
Sbjct: 1026 SEIHEIVLVGGSTRIPKVQQLVKDFFEGKEP 1056
Score = 110 bits (265), Expect = 1e-24
Identities = 46/87 (52%), Positives = 68/87 (78%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 190
+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD ++ HF++ +K+K K+
Sbjct: 890 KNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKN 949
Query: 191 LATNKRALRRLRTACERAKRTCHRPHK 271
+ + RA+++LR E+AKR H+
Sbjct: 950 IRKDNRAVQKLRREVEKAKRALSTQHQ 976
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/72 (40%), Positives = 37/72 (51%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K ++ INPDE +L G+ E+ + GIET GGVMT LI R
Sbjct: 1054 KEPSRGINPDEAVAYGAAVQAGVLGGE--EDTGEVVLLDVNPLTLGIETVGGVMTKLISR 1111
Query: 681 NTTIPTKQTQTF 716
NT IPTK++Q F
Sbjct: 1112 NTVIPTKKSQVF 1123
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 99.5 bits (237), Expect = 2e-21
Identities = 43/77 (55%), Positives = 60/77 (77%)
Frame = +2
Query: 17 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 196
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61
Query: 197 TNKRALRRLRTACERAK 247
+ AL+RLR A E+AK
Sbjct: 62 KDSMALQRLREAAEKAK 78
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Frame = +1
Query: 238 EGKEDLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDA 405
+ K +LSSS Q I + + ++R++FE L ADL T+ P +K L+DA
Sbjct: 76 KAKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVADLINRTVGPCKKCLQDA 135
Query: 406 KMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKEP 510
+++K +I D++LVGG TR+PKVQ+ +QD F G+ P
Sbjct: 136 EINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVP 169
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/69 (43%), Positives = 37/69 (53%)
Frame = +3
Query: 510 NKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTT 689
+K++NPDE +L GD V+D GIET GGV T LI RNTT
Sbjct: 170 SKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITRNTT 225
Query: 690 IPTKQTQTF 716
IPTK++Q F
Sbjct: 226 IPTKKSQVF 234
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 80.6 bits (190), Expect = 1e-15
Identities = 36/94 (38%), Positives = 66/94 (70%), Gaps = 5/94 (5%)
Frame = +1
Query: 244 KEDLSSSTQASIEI--DSLFEG---IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAK 408
K +L+ + + +I++ SL EG + F +I+R FE +N DLF+ ++P+ + L + +
Sbjct: 299 KINLTRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRVLAEVE 358
Query: 409 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKEP 510
+ K ++ ++VLVGGSTR+PK+++L+Q+FF+GK P
Sbjct: 359 LPKEEVDEVVLVGGSTRVPKIRQLIQEFFDGKPP 392
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/93 (36%), Positives = 57/93 (61%)
Frame = +2
Query: 14 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 193
NV++ DLGGGT DVS+L I+ G+F + AG+ LGG+DF+ R + + +Q +++ + L
Sbjct: 223 NVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQL 282
Query: 194 ATNKRALRRLRTACERAKRTCHRPHKRALR*IL 292
T ++RLR E AK R ++ ++ +L
Sbjct: 283 -TCSEDIQRLRQEVEAAKINLTRTNEVTIKLML 314
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 190
RNV+ D+G + V I G +V STA + +LGG DFD +V HF QEFK KYK D
Sbjct: 253 RNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKID 312
Query: 191 LATNKRALRRLRTACERAKR 250
+ ++ +A +L CE+ K+
Sbjct: 313 VHSSIKAKIKLGAECEKLKK 332
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +1
Query: 256 SSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDI 435
+++++ I I+ E D + + RA+FEEL ADL + P+ +L A+ K + ++
Sbjct: 336 ANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQSGKYSVKNV 393
Query: 436 V 438
V
Sbjct: 394 V 394
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 68.1 bits (159), Expect = 7e-12
Identities = 31/63 (49%), Positives = 48/63 (76%)
Frame = +1
Query: 322 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 501
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-G 111
Query: 502 KEP 510
+ P
Sbjct: 112 RVP 114
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/69 (43%), Positives = 37/69 (53%)
Frame = +3
Query: 510 NKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTT 689
+K++NPDE +L GD V+D GIET GGV T LI RNTT
Sbjct: 115 SKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITRNTT 170
Query: 690 IPTKQTQTF 716
IPTK++Q F
Sbjct: 171 IPTKKSQVF 179
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K+ LS++ + +I+ +F+G DF +TR EE+ DLF PV ++L+ A M
Sbjct: 255 KQVLSANNEIFAQIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMND 314
Query: 424 IHDIVLVGGSTRIPKVQKLL 483
I +VLVGG R+PKVQ L
Sbjct: 315 IDSVVLVGGGIRVPKVQDAL 334
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 VKSTAGDTHLGGEDFDNRMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKR 250
+K D LGG D R+ +H VQ FK+ K+K ++ + RA+ + R K+
Sbjct: 201 IKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQ 256
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/82 (37%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Frame = +2
Query: 17 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR-----KY 181
VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR K+
Sbjct: 156 VLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLLWKW 215
Query: 182 KKDLATNKRALRRLRTACERAK 247
K D TNKR+ +L+T+ E+ K
Sbjct: 216 KIDPLTNKRSKTKLQTSAEQCK 237
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITR 330
K LS+ A+ +DSL EGIDF ++R
Sbjct: 237 KNILSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/33 (45%), Positives = 27/33 (81%)
Frame = +1
Query: 409 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 507
+ ++ + ++LVGG+TR PK+Q+LL+++F GKE
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKE 67
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 2 GTRRNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 133
G + LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1424 GAHTDTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 29 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 133
D G GT VS + +E+G +++ D H+ G F
Sbjct: 1526 DNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 2 GTRRNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 145
GT +I DLG G + + + E G V +TH+ G F R+
Sbjct: 3022 GTESKAVISDLGKGNYAIRFVPKEFGDHLVNVKFDETHIPGSPFKIRV 3069
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 154 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 246
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1
Query: 421 QIHDIVLVGGSTRIPKVQKLLQDFFNGKE 507
+I + +VGGSTRIP ++ ++++ F GKE
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKE 33
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 17 VLIFDLGGGTFDVSILTIEDGIFEVK 94
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = -3
Query: 692 DGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSLD-SCTISYGLVR-VN 519
DG+V LDE + +++SL++ G C + ++ + + TV++SSL S VR +
Sbjct: 1160 DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSLSHESNGSLTRVRQIR 1217
Query: 518 RFVG 507
+FVG
Sbjct: 1218 QFVG 1221
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 145 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 234
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 23 IFDLGGGTFDVSILTIEDGIFEV 91
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 27 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 170
L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 154 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLSSS---TQASIEIDSLFEGIDFYTSI 324
LCP ++ + GP +++E AFA C+ D++ S AS ID L F T++
Sbjct: 202 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDMTRSWPLRDASDAID-LVRKYGFPTNV 260
Query: 325 TR 330
R
Sbjct: 261 YR 262
>SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 154 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLSSS---TQASIEIDSLFEGIDFYTSI 324
LCP ++ + GP +++E AFA C+ D++ S AS ID L F T++
Sbjct: 140 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDMTRSWPLRDASDAID-LVRKYGFPTNV 198
Query: 325 TR 330
R
Sbjct: 199 YR 200
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 154 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 246
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 96 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 212
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14)
Length = 1085
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = +2
Query: 41 GTFDV-SILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL------AT 199
GTFD+ I+ + + I E + + +L + V+ FK Y++ L
Sbjct: 50 GTFDIIRIVCLRESIREFRFSHFRENLSLPLYGLPANKTVVRFFKTAYERVLKFCFLKTA 109
Query: 200 NKRALRRLRTACERAKRTCHRPHKRALR 283
++ +R L+TACER R +KR +R
Sbjct: 110 YEKVMRFLKTACERVMRFLKTAYKREMR 137
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -1
Query: 322 LTCRSQYPQRENLSQCSLVWTMTGPLCPLTCSTQTPKSSLVGSEVLFVFPLELL 161
L CRS+ + N CS+ + +CP + +T SS + + L V PLE +
Sbjct: 75 LICRSRRYRHRNGHNCSISRNSSSEICPSCRALETSLSSCLAT--LLVRPLETI 126
>SB_57167| Best HMM Match : Ribosomal_MRP8 (HMM E-Value=3)
Length = 698
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 383 WRSLSVMPRWIRLKSTILYWWVAPLVSPRCRSSCKISLMERSQQIY 520
W + V P W+ + T LY +SP+ K+S SQQ+Y
Sbjct: 237 WLDVFVTPDWLDVFYTSLYNQRLGYLSPKFEKLVKLSGTHLSQQVY 282
>SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2070
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 171 LNSWTKWLTMRLSKSSP-PKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRLVP 1
LN KW+TMR + P +W DF S++ + ++P P K++ VP
Sbjct: 1371 LNKSMKWITMRTATLPPSTRWAYWIADFDFLSKSAIQAL---RLPVPAPKVNNMEKVP 1425
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 30 TSAAVPSTCPSLPSRMVSSR*NPPPATP 113
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 154 LCPGVQEEIQKGPRYQQESS*AFAYCM 234
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 154 LCPGVQEEIQKGPRYQQESS*AFAYCM 234
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 283 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 402
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
>SB_41979| Best HMM Match : rve (HMM E-Value=1.3e-23)
Length = 395
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 555 QLHHKLRPRQG**ICWLLSIKEI 487
QLHH++ PRQG C LS K +
Sbjct: 9 QLHHRVYPRQGQCFCRFLSRKPV 31
>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
Length = 312
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +3
Query: 48 STCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLPTREL 212
S CPSLP+ S TP + TI T + SS T TS PT ++
Sbjct: 46 SLCPSLPTSSTHSTSPTVQTTPAFTTSPATILPPTAKTTSS---TSSTSKPTEDV 97
>SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 316 TSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGG-STRIPKVQKLLQ 486
T ++ARF++ DL T++P+ ++++ D + +++ G R+ + L+Q
Sbjct: 176 TEHSKARFKQQLTDLVIHTLQPIRENIQSLSKDPGLVSNVLETGAEKARLLAEETLVQ 233
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,439,306
Number of Sequences: 59808
Number of extensions: 509817
Number of successful extensions: 4130
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4123
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -