Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00014
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.21 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   5.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   5.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   7.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 308 ILKVIHEVLVDGYYYYMFIVITILY 234
           I+  +H +L   Y+YY FI++  +Y
Sbjct: 90  IIFTVHFLLCTYYFYYAFIILLCVY 114



 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -3

Query: 272 YYYYMFIVITI--LYLTTFMQFL 210
           Y+YY FI+ T+  L+L     F+
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYYFV 137



 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 502 LCIWCVYLFFAAFYLCLM 555
           L + C+Y FF AF +  M
Sbjct: 161 LFLLCIYHFFCAFIIFTM 178



 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 272 YYYYMFIVITI-LYLTTFMQFLTFISL 195
           Y+YY FI+ T+ L L   + +  ++ L
Sbjct: 240 YFYYAFILFTVHLLLLVCIYYFYYMHL 266


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -3

Query: 272 YYYYMFIVITILYLTTFMQFLTFISLHSNMSI 177
           Y   ++I+ ++LY+ T +  +TF+     + I
Sbjct: 270 YVLILYILESLLYMVTKLVVVTFLKFIKKIQI 301


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 135 IHILFY*CTFW 167
           IH LFY CTF+
Sbjct: 20  IHPLFYVCTFF 30


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 135 IHILFY*CTFW 167
           IH LFY CTF+
Sbjct: 20  IHPLFYVCTFF 30


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 359 FPFSIQCNSTNYLEETTILKVIHEVL 282
           F + I  + T Y+  TTI  + H VL
Sbjct: 144 FQYYIGRSFTYYVCNTTIFLIFHSVL 169


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 269 YYYMFIVITILYLTT 225
           YY +  VI +LY+ T
Sbjct: 100 YYLLLFVINVLYVLT 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,008
Number of Sequences: 336
Number of extensions: 3194
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)