Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00010
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.81 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   4.3  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   4.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   4.3  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 651 CDINIMQTFCVM*YGQCICKLI 716
           CDIN +Q FC+M   +C+  LI
Sbjct: 377 CDINSIQYFCLM--ARCLNTLI 396


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 379 PADKICEKLKKKDAQICDLRFDKQID 456
           P D IC K +K    +  LR  K++D
Sbjct: 455 PLDAICNKPRKDAVCVSQLRNAKKVD 480


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -2

Query: 221 HLIAWRQTSLQFSHTLRNHLLEVIGPPAQP*P 126
           HL  +++ +LQ    +R H++  +    QP P
Sbjct: 161 HLHRYKEEALQGDGRMRQHVMHNLSSVPQPQP 192


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -2

Query: 221 HLIAWRQTSLQFSHTLRNHLLEVIGPPAQP*P 126
           HL  +++ +LQ    +R H++  +    QP P
Sbjct: 161 HLHRYKEEALQGDGRMRQHVMHNLSSVPQPQP 192


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -2

Query: 221 HLIAWRQTSLQFSHTLRNHLLEVIGPPAQP*P 126
           HL  +++ +LQ    +R H++  +    QP P
Sbjct: 161 HLHRYKEEALQGDGRMRQHVMHNLSSVPQPQP 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,117
Number of Sequences: 336
Number of extensions: 3306
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)