Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1379
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457265-1|CAG33546.1| 421|Homo sapiens TMLHE protein. 50 7e-06
BX276110-4|CAH71442.1| 376|Homo sapiens trimethyllysine hydroxy... 50 7e-06
BX276110-3|CAH71441.1| 421|Homo sapiens trimethyllysine hydroxy... 50 7e-06
BC025269-1|AAH25269.1| 376|Homo sapiens TMLHE protein protein. 50 7e-06
AK001589-1|BAA91775.1| 421|Homo sapiens protein ( Homo sapiens ... 50 7e-06
AF373407-1|AAL01871.1| 421|Homo sapiens epsilon-trimethyllysine... 50 7e-06
CR456812-1|CAG33093.1| 387|Homo sapiens BBOX1 protein. 30 8.2
BC011034-1|AAH11034.1| 387|Homo sapiens butyrobetaine (gamma), ... 30 8.2
AF082868-1|AAC64066.1| 387|Homo sapiens gamma butyrobetaine hyd... 30 8.2
>CR457265-1|CAG33546.1| 421|Homo sapiens TMLHE protein.
Length = 421
Score = 50.0 bits (114), Expect = 7e-06
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 258 WDDKHTTEFKADFLSQFDYKTWKNNRRLKPRLWRGCNVADR--IAKVHVDEFLDSDDSSK 431
W D H T++ ++L + Y+ K + ++PR+ + + + V FL++++ K
Sbjct: 120 WPDGHVTKYDLNWLVKNSYEGQKQ-KVIQPRILWNAEIYQQAQVPSVDCQSFLETNEGLK 178
Query: 432 EVFQSLLDYGVAFITGVQPSAEATETCAKL*EEFNTLFLVLPWEFTT 572
+ Q+ L YG+AF+ V P+ E TE A+ W FT+
Sbjct: 179 KFLQNFLLYGIAFVENVPPTQEHTEKLAERISLIRETIYGRMWYFTS 225
Score = 38.3 bits (85), Expect = 0.023
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 115 FEDCWLRDHCRCSQCYHANTFQRA 186
F+ WLRDHCR + CY++ T QR+
Sbjct: 71 FDYVWLRDHCRSASCYNSKTHQRS 94
>BX276110-4|CAH71442.1| 376|Homo sapiens trimethyllysine
hydroxylase, epsilon protein.
Length = 376
Score = 50.0 bits (114), Expect = 7e-06
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 258 WDDKHTTEFKADFLSQFDYKTWKNNRRLKPRLWRGCNVADR--IAKVHVDEFLDSDDSSK 431
W D H T++ ++L + Y+ K + ++PR+ + + + V FL++++ K
Sbjct: 120 WPDGHVTKYDLNWLVKNSYEGQKQ-KVIQPRILWNAEIYQQAQVPSVDCQSFLETNEGLK 178
Query: 432 EVFQSLLDYGVAFITGVQPSAEATETCAKL*EEFNTLFLVLPWEFTT 572
+ Q+ L YG+AF+ V P+ E TE A+ W FT+
Sbjct: 179 KFLQNFLLYGIAFVENVPPTQEHTEKLAERISLIRETIYGRMWYFTS 225
Score = 38.3 bits (85), Expect = 0.023
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 115 FEDCWLRDHCRCSQCYHANTFQRA 186
F+ WLRDHCR + CY++ T QR+
Sbjct: 71 FDYVWLRDHCRSASCYNSKTHQRS 94
>BX276110-3|CAH71441.1| 421|Homo sapiens trimethyllysine
hydroxylase, epsilon protein.
Length = 421
Score = 50.0 bits (114), Expect = 7e-06
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 258 WDDKHTTEFKADFLSQFDYKTWKNNRRLKPRLWRGCNVADR--IAKVHVDEFLDSDDSSK 431
W D H T++ ++L + Y+ K + ++PR+ + + + V FL++++ K
Sbjct: 120 WPDGHVTKYDLNWLVKNSYEGQKQ-KVIQPRILWNAEIYQQAQVPSVDCQSFLETNEGLK 178
Query: 432 EVFQSLLDYGVAFITGVQPSAEATETCAKL*EEFNTLFLVLPWEFTT 572
+ Q+ L YG+AF+ V P+ E TE A+ W FT+
Sbjct: 179 KFLQNFLLYGIAFVENVPPTQEHTEKLAERISLIRETIYGRMWYFTS 225
Score = 38.3 bits (85), Expect = 0.023
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 115 FEDCWLRDHCRCSQCYHANTFQRA 186
F+ WLRDHCR + CY++ T QR+
Sbjct: 71 FDYVWLRDHCRSASCYNSKTHQRS 94
>BC025269-1|AAH25269.1| 376|Homo sapiens TMLHE protein protein.
Length = 376
Score = 50.0 bits (114), Expect = 7e-06
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 258 WDDKHTTEFKADFLSQFDYKTWKNNRRLKPRLWRGCNVADR--IAKVHVDEFLDSDDSSK 431
W D H T++ ++L + Y+ K + ++PR+ + + + V FL++++ K
Sbjct: 120 WPDGHVTKYDLNWLVKNSYEGQKQ-KVIQPRILWNAEIYQQAQVPSVDCQSFLETNEGLK 178
Query: 432 EVFQSLLDYGVAFITGVQPSAEATETCAKL*EEFNTLFLVLPWEFTT 572
+ Q+ L YG+AF+ V P+ E TE A+ W FT+
Sbjct: 179 KFLQNFLLYGIAFVENVPPTQEHTEKLAERISLIRETIYGRMWYFTS 225
Score = 38.3 bits (85), Expect = 0.023
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 115 FEDCWLRDHCRCSQCYHANTFQRA 186
F+ WLRDHCR + CY++ T QR+
Sbjct: 71 FDYVWLRDHCRSASCYNSKTHQRS 94
>AK001589-1|BAA91775.1| 421|Homo sapiens protein ( Homo sapiens
cDNA FLJ10727 fis, clone NT2RP3001221, weakly similar to
GAMMA-BUTYROBETAINE,2-OXOGLUTARATE DIOXYGENASE (EC
1.14.11.1). ).
Length = 421
Score = 50.0 bits (114), Expect = 7e-06
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 258 WDDKHTTEFKADFLSQFDYKTWKNNRRLKPRLWRGCNVADR--IAKVHVDEFLDSDDSSK 431
W D H T++ ++L + Y+ K + ++PR+ + + + V FL++++ K
Sbjct: 120 WPDGHVTKYDLNWLVKNSYEGQKQ-KVIQPRILWNAEIYQQAQVPSVDCQSFLETNEGLK 178
Query: 432 EVFQSLLDYGVAFITGVQPSAEATETCAKL*EEFNTLFLVLPWEFTT 572
+ Q+ L YG+AF+ V P+ E TE A+ W FT+
Sbjct: 179 KFLQNFLLYGIAFVENVPPTQEHTEKLAERISLIRETIYGRMWYFTS 225
Score = 38.3 bits (85), Expect = 0.023
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 115 FEDCWLRDHCRCSQCYHANTFQRA 186
F+ WLRDHCR + CY++ T QR+
Sbjct: 71 FDYVWLRDHCRSASCYNSKTHQRS 94
>AF373407-1|AAL01871.1| 421|Homo sapiens epsilon-trimethyllysine
2-oxoglutarate dioxygenase protein.
Length = 421
Score = 50.0 bits (114), Expect = 7e-06
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 258 WDDKHTTEFKADFLSQFDYKTWKNNRRLKPRLWRGCNVADR--IAKVHVDEFLDSDDSSK 431
W D H T++ ++L + Y+ K + ++PR+ + + + V FL++++ K
Sbjct: 120 WPDGHVTKYDLNWLVKNSYEGQKQ-KVIQPRILWNAEIYQQAQVPSVDCQSFLETNEGLK 178
Query: 432 EVFQSLLDYGVAFITGVQPSAEATETCAKL*EEFNTLFLVLPWEFTT 572
+ Q+ L YG+AF+ V P+ E TE A+ W FT+
Sbjct: 179 KFLQNFLLYGIAFVENVPPTQEHTEKLAERISLIRETIYGRMWYFTS 225
Score = 38.3 bits (85), Expect = 0.023
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 115 FEDCWLRDHCRCSQCYHANTFQRA 186
F+ WLRDHCR + CY++ T QR+
Sbjct: 71 FDYVWLRDHCRSASCYNSKTHQRS 94
>CR456812-1|CAG33093.1| 387|Homo sapiens BBOX1 protein.
Length = 387
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 127 WLRDHCRCSQCYHANTFQRAKHILELPDSKI 219
WLRD+C CS CY ++ + K ++E D I
Sbjct: 33 WLRDNCPCSDCY-LDSAKARKLLVEALDVNI 62
>BC011034-1|AAH11034.1| 387|Homo sapiens butyrobetaine (gamma),
2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxyl
protein.
Length = 387
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 127 WLRDHCRCSQCYHANTFQRAKHILELPDSKI 219
WLRD+C CS CY ++ + K ++E D I
Sbjct: 33 WLRDNCPCSDCY-LDSAKARKLLVEALDVNI 62
>AF082868-1|AAC64066.1| 387|Homo sapiens gamma butyrobetaine
hydroxylase protein.
Length = 387
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 127 WLRDHCRCSQCYHANTFQRAKHILELPDSKI 219
WLRD+C CS CY ++ + K ++E D I
Sbjct: 33 WLRDNCPCSDCY-LDSAKARKLLVEALDVNI 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,502,333
Number of Sequences: 237096
Number of extensions: 1784845
Number of successful extensions: 3583
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3577
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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