Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1373
         (728 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    62   1e-08
UniRef50_Q8NNA0 Cluster: Uncharacterized protein, probably invol...    33   9.5  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 62.5 bits (145), Expect = 1e-08
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +3

Query: 429 IYGTGGLLTPLVAPVLGFKLSGNSGRNTAAAAQAYYGNL 545
           IYGTGGLLTP+VAP+LGF  +G +  +TAAAAQAYYGN+
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNV 55



 Score = 39.5 bits (88), Expect = 0.082
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = +1

Query: 487 SAGIAAGTQPLLHKHTTEI*VAGSIVSQLTAAXMVAPTP 603
           SAGIAAG+     +      VAGS++SQLT+A M+APTP
Sbjct: 36  SAGIAAGSTAAAAQAYYGNVVAGSVISQLTSAAMLAPTP 74


>UniRef50_Q8NNA0 Cluster: Uncharacterized protein, probably involved
           in trehalose biosynthesis; n=3; Corynebacterium|Rep:
           Uncharacterized protein, probably involved in trehalose
           biosynthesis - Corynebacterium glutamicum
           (Brevibacterium flavum)
          Length = 363

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +3

Query: 456 PLVAPVLGFKLSGNSGRN-TAAAAQAYYGNLSGRQHCVT 569
           P +AP+LGF  +  SG N T   AQ Y   L G  H +T
Sbjct: 128 PNIAPILGFSSAEISGANYTLVMAQQYVPGLDGWSHALT 166


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,802,412
Number of Sequences: 1657284
Number of extensions: 8317984
Number of successful extensions: 17616
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17611
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)