Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1351
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5B7C7 Cluster: Putative uncharacterized protein; n=1; ...    34   2.0  
UniRef50_A5BW48 Cluster: Putative uncharacterized protein; n=1; ...    33   2.7  
UniRef50_Q86AP5 Cluster: Similar to Dictyostelium discoideum (Sl...    32   6.2  
UniRef50_Q7RM68 Cluster: Var1p, putative; n=3; Plasmodium (Vinck...    32   6.2  
UniRef50_A0CZZ6 Cluster: Chromosome undetermined scaffold_32, wh...    32   6.2  
UniRef50_Q8Y5Y9 Cluster: Lmo1914 protein; n=13; Listeria|Rep: Lm...    32   8.2  

>UniRef50_Q5B7C7 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 417

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = -3

Query: 374 PKDVFSSTTNFFLWLAIMFLTIIGGSFM-WINCLFSPVSTTILSL 243
           P+   S+ T + LWLAI+ L+++ G+++ +   L  P++ T  SL
Sbjct: 158 PRYATSALTGWMLWLAILILSLVSGTYLGFAYLLLMPITGTAASL 202


>UniRef50_A5BW48 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 1581

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -3

Query: 326 IMFLTIIGGSFMWINCLFSPVSTTILSLEVEFGDF 222
           ++ +T  GG  +W+  L  P+ TT++S+ +  G+F
Sbjct: 38  VLIITHFGGLKLWLRPLLRPIGTTLVSISIFVGEF 72


>UniRef50_Q86AP5 Cluster: Similar to Dictyostelium discoideum (Slime
           mold). Homeobox-containing protein; n=3; cellular
           organisms|Rep: Similar to Dictyostelium discoideum
           (Slime mold). Homeobox-containing protein -
           Dictyostelium discoideum (Slime mold)
          Length = 870

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -3

Query: 365 VFSSTTNFFLWLAIMFLTIIGGSFMWINCLFSPVSTTILSLEVEFG 228
           V +   NF  W+ +MFL ++    + ++    P+STTIL+L   FG
Sbjct: 629 VINEIVNFIFWI-LMFLFVMTLYGVEVSVFLVPLSTTILALSFAFG 673


>UniRef50_Q7RM68 Cluster: Var1p, putative; n=3; Plasmodium
           (Vinckeia)|Rep: Var1p, putative - Plasmodium yoelii
           yoelii
          Length = 397

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +2

Query: 17  EYPCNYVYKVFILNTILLFFRTLSCKYL*LFRYFSLKMD 133
           +Y  NY  ++FI+NT+  FF T+S   +   +YF  +++
Sbjct: 244 QYEDNYTKELFIINTLKYFFSTISNSIIQNIKYFEKEIE 282


>UniRef50_A0CZZ6 Cluster: Chromosome undetermined scaffold_32, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_32,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 397

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = +1

Query: 235 STSRDKIVVETGENRQFIHINEPPIIVKNMIANHKKKFVVLLKTSFGIE 381
           S ++  I+++ GE      INEP IIV+    NHKK+ + + KT+  I+
Sbjct: 14  SDNQQDIIIQQGE------INEPDIIVEQFTLNHKKEQIKVPKTNSQIK 56


>UniRef50_Q8Y5Y9 Cluster: Lmo1914 protein; n=13; Listeria|Rep:
           Lmo1914 protein - Listeria monocytogenes
          Length = 227

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = -2

Query: 141 LFISIFNEKYLNNYKYLHDSVLKNRRIVF 55
           LF++I  + +L N + LHD++L N +IVF
Sbjct: 83  LFVNISYDTFLENQEELHDTLLDNGKIVF 111


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,619,161
Number of Sequences: 1657284
Number of extensions: 8461298
Number of successful extensions: 22557
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22553
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)