Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1348
(568 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0) 109 1e-24
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 42 4e-04
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 37 0.013
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 34 0.093
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 30 1.1
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 30 1.1
SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 29 2.6
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 2.6
SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 29 2.6
SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_25030| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 28 4.6
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 28 4.6
SB_16935| Best HMM Match : Cadherin (HMM E-Value=0) 28 4.6
SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_32896| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-17) 28 6.1
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 27 8.1
SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8) 27 8.1
SB_8252| Best HMM Match : rve (HMM E-Value=0.13) 27 8.1
>SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)
Length = 299
Score = 109 bits (263), Expect = 1e-24
Identities = 48/56 (85%), Positives = 49/56 (87%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHRRVN 422
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP WH +VN
Sbjct: 58 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRKWHTKVN 113
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/59 (55%), Positives = 44/59 (74%)
Frame = +1
Query: 82 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
ARP+++V++E E+ LP VFKAPIRPDLVN VH +++KN RQPY V+K AGH+
Sbjct: 2 ARPVITVFNENGESA--GQTTLPAVFKAPIRPDLVNFVHSNIAKNKRQPYAVNKLAGHQ 58
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 383 PTKPWRQLAPSRQPPTAESGLGKQPVAATGVPAARSG*RTHYEKIPELPLXVADKVQEIN 562
PTK WR+ + +AA+ +PA EKI E+PL ++D ++ +
Sbjct: 101 PTKTWRKWHTKVNVQQRRFAVCSA-LAASALPALIMARGHRIEKIAEVPLVISDAIESVT 159
Query: 563 KT 568
KT
Sbjct: 160 KT 161
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/57 (42%), Positives = 28/57 (49%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHR 413
GGW Q WG G+ + R GGG R G +G M +GG M R PGG W R
Sbjct: 258 GGWGQGPGGGWGRGQG-RGMGRGPGGGWGRGSGGGWGRM-QGGGM--GRGPGGGWGR 310
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 12/69 (17%)
Frame = +3
Query: 243 GGWSQTSAESWGT--GRAVARIP-----RVRGGGTHRSGQGAFGNMCRGGRMFAP----- 386
GGW + S WG G + R P R++GG G G +G M GG P
Sbjct: 282 GGWGRGSGGGWGRMQGGGMGRGPGGGWGRMQGGMGRGPG-GGWGRMQGGGMGRGPGGGLG 340
Query: 387 RSPGGSWHR 413
R PGG W R
Sbjct: 341 RGPGGGWGR 349
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 273 WGTGRAVARIPRVRGGGTHRS-GQGAFGNMCRGGRMFAPRSPGGSWHR 413
WG G + + PR G G+ GQG G RG R PGG W R
Sbjct: 241 WGGG--MGQGPRGWGRGSGGGWGQGPGGGWGRGQGRGMGRGPGGGWGR 286
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 36.7 bits (81), Expect = 0.013
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP-----RSPGGSW 407
GGW + S WG R++GGG R G +G M GG P R PGG W
Sbjct: 38 GGWGRGSGGGWG---------RMQGGGMGRGPGGGWGRMQGGGMGRGPGGGLGRGPGGGW 88
Query: 408 HR 413
R
Sbjct: 89 GR 90
Score = 35.9 bits (79), Expect = 0.023
Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG--GRMFA---PRSPGGSW 407
GGW + S WG G R +GGG R G +G G GRM R PGG W
Sbjct: 6 GGWGRGSGGGWGQGPG-GGWGRGQGGGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGW 64
Query: 408 HR 413
R
Sbjct: 65 GR 66
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +3
Query: 243 GGWSQTSAESWGT--GRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSW 407
GG + WG G + R P GGG R G +G M GG R PG W
Sbjct: 54 GGMGRGPGGGWGRMQGGGMGRGP---GGGLGRGPGGGWGRMQEGG---MGRGPGQGW 104
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 33.9 bits (74), Expect = 0.093
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 369 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWF 256
HH CY H Y Y+ H H + + H YP RH++
Sbjct: 20 HHYCCYCHH---RYCYYRHHHYCWYRHHYHYPCYRHYY 54
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHR 413
GG+ +S +G GR RGGG + G+G G G R + S GG + R
Sbjct: 101 GGYGGSSRGGYGGGRGGGGYGGGRGGGGYGGGRG--GGYGGGRRDYGGGSKGGGYDR 155
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Frame = -2
Query: 369 HHDTCYRRHPDRTYGYHHHGHAEFGQQH-------VRYPMIRHWFVTSLL 241
HH RH R + +HHH H E+ ++H + +IRH F+ ++
Sbjct: 325 HHQRHRHRHRHR-HRHHHHHHHEYNRRHRYFTDINITIQIIRHHFIIIII 373
>SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 328 WVPPPRTRGIRATARPVPHD 269
W+PP RTR R T PV H+
Sbjct: 228 WMPPVRTRPARPTVMPVTHE 247
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 369 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFVTSLL 241
HH + RH R + YHHH + H +P FVT+++
Sbjct: 570 HHHLHHHRHHHRHHHYHHHHY----PHHHHHPCTIIIFVTTII 608
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = +3
Query: 210 QELEAALLREQGGWSQTSAESWGTGRA----VARIPR-VRGGGTHRS 335
+ E+AL E+ W+Q AES T RA +AR+ R GT RS
Sbjct: 3432 EHAESALAAERAQWAQEKAESQNTIRAANEEIARLKEDARKAGTERS 3478
>SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 378 TYVHHDTCYRRHPDRTYGYHHHGHA 304
TY H DT R+HPD H HA
Sbjct: 123 TYTHQDTQMRKHPDTQIYVHAPRHA 147
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 258 TSAESWGTGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 374
T +E +G ++ R PR RGGG G G G RGGR
Sbjct: 983 TPSEPSSSGSSIVRRPRRRRGGGGGGGGGGGGGGGRRGGR 1022
>SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 354 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 262
Y +HP T+ YHH H + ++ ++P + H
Sbjct: 413 YHQHPQLTHRYHHQ-HPQVIHRYHQHPQVTH 442
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 354 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 262
Y +HP T+ YH H + H ++P + H
Sbjct: 232 YHQHPQVTHRYHQHPQVTH-RYHQQHPQVTH 261
>SB_25030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 333 TYGYHHHGHAEFGQQHVRYPMI-RHWFVTSLLAHAVGLP-RVLGHRNVN 193
+Y +HHHG E Q V I R W L +H P RV+G ++
Sbjct: 21 SYQWHHHGTGETDDQPVTTTRITRTWVNRRLNSHRTIKPSRVIGRAQIH 69
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 149 GRGLAAPCTVSLFSEYTDTKGRATDRLI 66
G+GL C+V+L S Y T+G+ RL+
Sbjct: 3163 GKGLTTWCSVNLDSVYLSTEGKEVYRLV 3190
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 28.3 bits (60), Expect = 4.6
Identities = 9/35 (25%), Positives = 14/35 (40%)
Frame = -2
Query: 381 RTYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRY 277
R + HH + H + +HHH H H +
Sbjct: 209 RHHQHHQHHHHHHHQHNHHHHHHNHHHHHHHHYHH 243
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 240 QGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPRSPGGSWHR 413
QGG ++ +G G + RGGG + G+G G G R + S GG + R
Sbjct: 188 QGGGYRSGGGGYG-GSSRGGYGGGRGGGGYGGGRGGGGGYGGGRRDYGGGSKGGGYDR 244
>SB_16935| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2204
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = -2
Query: 459 TGCLPRPLSA-VGG*RDGASCRQGFVGRTYVHHDTCYRR----HPDRTYG 325
+ C P+ A VG R +CR GF G ++ +D + HPD T G
Sbjct: 1762 SSCSPQATCARVGPGRASCTCRVGFTGNGHICNDIDFCAPNPCHPDNTIG 1811
>SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -2
Query: 381 RTYVH-HDTCYRRHPDRTYGYHHHGHAEFGQQHVRY 277
R Y H CYRR R + YHHH + +RY
Sbjct: 216 RCYYHCRRRCYRRR--RRHFYHHHPRRYHNHRRLRY 249
>SB_32896| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-17)
Length = 278
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 360 TCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFVTSLL 241
TC+ HP + Y H+ H F Q H + RH+ TS L
Sbjct: 52 TCFPYHPHYHHHYRHNDH-YFHQDH----LYRHYLSTSAL 86
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 373 RPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHD 269
RPP H + P PD WVP P R +P D
Sbjct: 250 RPPPHHDMRGP-PDQWVPGPEQRRDNMRGPGMPPD 283
>SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8)
Length = 193
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 369 HHDTCYRRHPDRTYGYHHH 313
HH YR H + Y +HHH
Sbjct: 96 HHHQHYRHHRHQHYRHHHH 114
>SB_8252| Best HMM Match : rve (HMM E-Value=0.13)
Length = 264
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 375 YVHHDTCYRRHPDRTYGYHHHGH 307
Y HH +RR R + +HHH H
Sbjct: 233 YHHHHHHHRRRRRRRHHHHHHHH 255
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,853,344
Number of Sequences: 59808
Number of extensions: 399615
Number of successful extensions: 1310
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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