Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1242
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   0.84 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   1.5  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   1.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   1.5  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   1.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   1.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.5  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   1.5  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   1.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   5.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   7.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    20   7.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 0.84
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 106  NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 228
            N+I  + W +  D  G     AYHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 227 PPAASTCPAHPXRLGARHHGLXXXWTFRTDLRP 325
           P  A   P HP    A  HGL       T L+P
Sbjct: 46  PQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQP 78


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 227 PPAASTCPAHPXRLGARHHGLXXXWTFRTDLRP 325
           P  A   P HP    A  HGL       T L+P
Sbjct: 46  PQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQP 78


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 227 PPAASTCPAHPXRLGARHHGLXXXWTFRTDLRP 325
           P  A   P HP    A  HGL       T L+P
Sbjct: 46  PQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQP 78


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 227 PPAASTCPAHPXRLGARHHGLXXXWTFRTDLRP 325
           P  A   P HP    A  HGL       T L+P
Sbjct: 46  PQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQP 78


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 227 PPAASTCPAHPXRLGARHHGLXXXWTFRTDLRP 325
           P  A   P HP    A  HGL       T L+P
Sbjct: 46  PQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQP 78


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 227 PPAASTCPAHPXRLGARHHGLXXXWTFRTDLRP 325
           P  A   P HP    A  HGL       T L+P
Sbjct: 46  PQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQP 78


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 227 PPAASTCPAHPXRLGARHHGLXXXWTFRTDLRP 325
           P  A   P HP    A  HGL       T L+P
Sbjct: 46  PQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQP 78


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 227 PPAASTCPAHPXRLGARHHGLXXXWTFRTDLRP 325
           P  A   P HP    A  HGL       T L+P
Sbjct: 46  PQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQP 78


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -2

Query: 194 CKSESPW*APVGSMPC 147
           C +E PW    G  PC
Sbjct: 351 CVNERPWSLYCGEPPC 366


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 40  IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEI 135
           I +  + N+++  V I    C N   A+F+E+
Sbjct: 283 IEAKRRDNEIKMFVKIVDASCRNFTAARFFEL 314


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 138 LRRARHRPHRCLPWGL*LAVGAHQCILQ*SLRRQVR 245
           L   R   ++ LP+GL  AVG+    +   L  +VR
Sbjct: 416 LYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTEVR 451


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = +2

Query: 248 PAHPXRLGARHHGLXXXWTFRTDLRP 325
           P HP    A  HGL       T L+P
Sbjct: 9   PQHPYAAPAPGHGLQPTMGDYTQLQP 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,712
Number of Sequences: 336
Number of extensions: 1603
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)