Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312H01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    26   0.23 
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    26   0.23 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.41 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.41 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.41 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.71 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.71 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.71 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.71 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   0.94 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.2  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   2.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.8  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   5.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   5.0  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   8.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.7  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 111 LVSYFNYTNMYTH 149
           +VSY+N TNMY H
Sbjct: 1   MVSYYNSTNMYRH 13


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 111 LVSYFNYTNMYTH 149
           +VSY+N TNMY H
Sbjct: 1   MVSYYNSTNMYRH 13


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 216 FILDLFLGGSFR-NYGAAVAAFTHTPRIPNDFTN 314
           ++  L L   +R  Y AA  AFTH P   N+F N
Sbjct: 582 WLCTLLLQRGYRVEYSAASDAFTHCPEGFNEFYN 615


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 216 FILDLFLGGSFR-NYGAAVAAFTHTPRIPNDFTN 314
           ++  L L   +R  Y AA  AFTH P   N+F N
Sbjct: 815 WLCTLLLQRGYRVEYSAASDAFTHCPEGFNEFYN 848


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 216 FILDLFLGGSFR-NYGAAVAAFTHTPRIPNDFTN 314
           ++  L L   +R  Y AA  AFTH P   N+F N
Sbjct: 815 WLCTLLLQRGYRVEYSAASDAFTHCPEGFNEFYN 848


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 216 FILDLFLGGSFR-NYGAAVAAFTHTPRIPNDFTN 314
           ++  L L   +R  Y AA  A+TH P   N+F N
Sbjct: 842 WLCTLLLQRGYRVEYSAASDAYTHAPEGFNEFYN 875


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 216 FILDLFLGGSFR-NYGAAVAAFTHTPRIPNDFTN 314
           ++  L L   +R  Y AA  A+TH P   N+F N
Sbjct: 842 WLCTLLLQRGYRVEYSAASDAYTHAPEGFNEFYN 875


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 216 FILDLFLGGSFR-NYGAAVAAFTHTPRIPNDFTN 314
           ++  L L   +R  Y AA  A+TH P   N+F N
Sbjct: 842 WLCTLLLQRGYRVEYSAASDAYTHAPEGFNEFYN 875


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 216 FILDLFLGGSFR-NYGAAVAAFTHTPRIPNDFTN 314
           ++  L L   +R  Y AA  A+TH P   N+F N
Sbjct: 842 WLCTLLLQRGYRVEYSAASDAYTHAPEGFNEFYN 875


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 189 NLVNVVGQIFILDLFLGGSFRNYGAAVAAFTHTPRIPNDFTNFTSVN 329
           N+++   Q   LDL  G  F+  G+    FTH      DFT   +VN
Sbjct: 445 NVLSTFWQQSDLDLSRGLDFQPRGSVFVRFTHLQN--QDFTYKITVN 489


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -3

Query: 453 ISFH*QYLKVVHTIDPLIQESLKVHSFLTSI**VWE 346
           I+FH     V+HT+  +++ ++   S +T +  VW+
Sbjct: 378 ITFHIGSQLVLHTVKTVLKTTMSTFSDITFMRTVWK 413


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 279 THTPRIPNDFTNF 317
           T TP +PNDF  F
Sbjct: 319 TETPGMPNDFEEF 331


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 15/60 (25%), Positives = 26/60 (43%)
 Frame = +3

Query: 138 MYTHNMYALRYAFCELLNLVNVVGQIFILDLFLGGSFRNYGAAVAAFTHTPRIPNDFTNF 317
           +Y+ N +A    F   L+  + V  + I+      SF+N+   VAA   T      + N+
Sbjct: 72  LYSFNTFAKLLIFVVSLSGNSAVFIMLIISFMHKKSFKNFVNNVAALDETLAKLGQYINY 131


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 246 MNHQGTSPE*IFDQPHLQGSVTH 178
           +N Q +  E +   PHL G +TH
Sbjct: 61  INSQPSMAEFMTALPHLSGDMTH 83


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 246 MNHQGTSPE*IFDQPHLQGSVTH 178
           +N Q +  E +   PHL G +TH
Sbjct: 61  INSQPSMAEFMTALPHLSGDMTH 83


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 285 TPRIPNDFTNF 317
           TP +PNDF  F
Sbjct: 323 TPGMPNDFEEF 333


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 285 TPRIPNDFTNF 317
           TP +PNDF  F
Sbjct: 321 TPGMPNDFEGF 331


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 285 TPRIPNDFTNF 317
           TP +PNDF  F
Sbjct: 323 TPGMPNDFEEF 333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,825
Number of Sequences: 336
Number of extensions: 2996
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)