Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312G07f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 36 0.020
SB_37892| Best HMM Match : rve (HMM E-Value=2.1e-16) 31 0.76
SB_11606| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 30 1.0
SB_43821| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_29909| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.8) 30 1.3
SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29) 29 1.8
SB_37521| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8) 29 3.1
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_50721| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_59266| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_56517| Best HMM Match : CUB (HMM E-Value=0.0011) 28 5.4
SB_46895| Best HMM Match : rve (HMM E-Value=1.6e-25) 28 5.4
SB_59366| Best HMM Match : 7tm_1 (HMM E-Value=5.2e-23) 27 7.1
SB_48596| Best HMM Match : Filament (HMM E-Value=0.23) 27 7.1
SB_46776| Best HMM Match : Deltaretro_Tax (HMM E-Value=7.4) 27 7.1
SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07) 27 7.1
SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_56455| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_30575| Best HMM Match : Pico_P2A (HMM E-Value=5.9) 27 9.4
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 35.9 bits (79), Expect = 0.020
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Frame = +2
Query: 62 VKNADITKAIKTDERTSKEIKP--GVPEFFNIQ-LNKVDVVKQSTNVVLTANVTPKKP-D 229
V+ + K I E+T++E+KP G P + L + +V++ V +KP +
Sbjct: 5392 VEEKPLEKQITRKEKTAEEVKPKKGKPMDREAKPLEEKPLVEEKELPVSAEKAVEEKPLE 5451
Query: 230 SPQTEKDQDCFPAAEPKSNIPLRKDSFVAKAVESIIENSHIDVKLSPALSRKSIEKHSPA 409
P T K++ PK+ P +++ K + ++E + V + A+ K +EK
Sbjct: 5452 KPITRKEKK-VEEVRPKTEKPTEREAKSLKE-KPLVEEKELTVSVEKAVEEKPLEKPITR 5509
Query: 410 PQSPSTPKAFFKRKAGSVELQDXPEKP 490
+ K K E + EKP
Sbjct: 5510 KEKKVEEVKPKKEKPTEREAKPLEEKP 5536
>SB_37892| Best HMM Match : rve (HMM E-Value=2.1e-16)
Length = 824
Score = 30.7 bits (66), Expect = 0.76
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 89 IKTDERTSKEIKPGV-PEFFNIQLNKVDVVKQSTNVVLTANVTPKKPDSPQTEKDQDCFP 265
I+ ++ K + P P + ++ K ++++ + +++A TPKKP +P +E+ P
Sbjct: 731 IRDQDQMGKVLTPAKSPRSYIVETEKGSQIRRNRSALVSA--TPKKPQAPTSEEKPTTQP 788
Query: 266 AAEP 277
A P
Sbjct: 789 AVLP 792
>SB_11606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 816
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 56 SPVKNADITKAIKTDERTSKEIKPGVPEFFNIQLNKVDVVKQSTNVVLTANVTPKKPDSP 235
S + K + + TS E + G E N++D + + +VV T NV K +SP
Sbjct: 55 SDTDGEEAVKVVVVESDTSDEEEEGEKEESMESYNELDEPQATYDVVDTYNVMHVKKNSP 114
Query: 236 QTEKDQD 256
+ D D
Sbjct: 115 DDDDDDD 121
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 30.3 bits (65), Expect = 1.0
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Frame = +2
Query: 29 SVTHINKEQSPVKNADITKAIKTDERTSKEIKPGVPEFFNIQLNKVDVVKQSTNVVLTAN 208
S++ ++ Q + +ADIT++ DE + P+ F+ + +++ S N +
Sbjct: 1445 SLSQVDGSQLSITDADITRS---DEPPPIKRNETYPKAFSTEYSQMKPFSNSLNPI---- 1497
Query: 209 VTPKKPDSPQTEKDQDCF-PAAEPKSNI--PLRKDSFVAKAVESIIENSHIDVKLSPALS 379
P KP SPQ K+Q+ + K+ + + DS ++ + E S I+ K P+ S
Sbjct: 1498 --PGKPTSPQLVKEQNSTRQESSNKATVTTSTKTDSLLSSSFE--FGASKIEPKPPPSES 1553
Query: 380 RK-SIEKHSPAPQSPSTPKAFFK 445
K + H+ P+ F K
Sbjct: 1554 AKPKLINHNIKPEKDHVDPIFGK 1576
>SB_43821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 89 IKTDERTSKEIKPG-VPEFFNIQLNKVDVVKQSTNVVLTANVTPKKPDSPQTEKDQDCFP 265
I+ +R K + P P + ++ K ++++ + +++ TPKKP +P +E+ P
Sbjct: 72 IRDQDRMRKVLTPAKFPRSYIVETEKGSKIRRNRSALVSP--TPKKPQAPTSEEKPTIPP 129
Query: 266 AAEP 277
A P
Sbjct: 130 AVLP 133
>SB_29909| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.8)
Length = 441
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/74 (31%), Positives = 31/74 (41%)
Frame = +2
Query: 212 TPKKPDSPQTEKDQDCFPAAEPKSNIPLRKDSFVAKAVESIIENSHIDVKLSPALSRKSI 391
TP P E D +P P IPL + + S+ N ID K PA K I
Sbjct: 322 TPSPPTDEDEELDMANYPPPLPLEVIPLEDELLLPHT--SLSPNGGID-KKPPAYEIKYI 378
Query: 392 EKHSPAPQSPSTPK 433
+ S + +SP P+
Sbjct: 379 GEVSLSQESPFAPQ 392
>SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29)
Length = 482
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 5/105 (4%)
Frame = +2
Query: 215 PKKPDSPQTEKDQDCFPAAEP---KSNIPLRKDSFVAKAVESIIENSHIDVKLS--PALS 379
P K D P+ +K + EP KS P++KD K E I+ K S P
Sbjct: 213 PMKKDEPKAKKSEGPMKKDEPKAKKSEGPIKKDEPKPKKSEGPIKKDEPKAKKSEGPMKK 272
Query: 380 RKSIEKHSPAPQSPSTPKAFFKRKAGSVELQDXPEKPRTNSLSTE 514
+ K S P PK K+ G ++ + + +S E
Sbjct: 273 DEPKPKKSEGPMKKDEPKP--KKSEGPMKKDEAKPAKKESSKHIE 315
>SB_37521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 251 QDCFPAAEPKSNIPLRKDSFVAKAVESIIENSHIDVKLSPA--LSRKSIEK 397
++CF A + N LR + A+ ++ SH+DV S A +SR S+E+
Sbjct: 6 RNCFKAID--KNTTLRTQTASARITNLLVARSHLDVSASSAHVISRFSLER 54
>SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8)
Length = 922
Score = 28.7 bits (61), Expect = 3.1
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 11/164 (6%)
Frame = +2
Query: 17 ETFISVTHINKEQSPVKNADITKAIKTDERTSKEIKPGVPEFFNIQLNKV----DVVKQS 184
E S+T + K+ NA + K E K KP V ++ N V +V+K++
Sbjct: 437 EKAASLTGVAKKPVKANNATKPEVGKPTEPLKKTEKPPVAAKKPVKANNVTKPVEVLKKA 496
Query: 185 TN----VVLTANVTP-KKPDSPQTE-KDQDCFPAAEPKSNIPLRKDSFVAKAVESIIENS 346
+ V T P K+ P + K + FP A KS K + V VES I
Sbjct: 497 DSFPGDVKKTVKSIPAKEVGKPMKDLKKAESFPGAAKKSTEATTKKTIVKSKVESKISKV 556
Query: 347 HIDVKLSP-ALSRKSIEKHSPAPQSPSTPKAFFKRKAGSVELQD 475
I S AL+ S + PS +R A + QD
Sbjct: 557 PIKPTGSTIALATGSTPSVVTVAEQPSKVDVTAERLAEDHQNQD 600
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 338 ENSHIDVKL-SPALSRKSIEKHSPAPQSPSTPKAFF-KRKAGSVEL 469
E S ID L SP R+ E+ SPA +P T A F +KA +VE+
Sbjct: 1414 ERSSIDRDLLSPVTHRRVTERMSPA-HTPCTANAMFGHKKASNVEI 1458
>SB_50721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1057
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Frame = +2
Query: 35 THINKEQSPVKNADITKAIKTDERTSKEIKPGVPEFFNIQLNKVDVVKQSTNVVLTA--N 208
T ++++ +++D+T+AI+T +K+ P+F N+ D+++ S L N
Sbjct: 268 TEVSRQLKETEDSDLTRAIQTSLEDTKKATNTCPKF-----NEEDILEHSPRFYLRTKEN 322
Query: 209 VTP--KKPDSPQTEKDQDCFPAAEPKSNIPLRKD 304
T +K DS Q C + SNI + D
Sbjct: 323 RTDLIEKEDSAFVSAIQACLMDSIKTSNICSKLD 356
>SB_59266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 678
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 275 PKSNIPLRKDSFVAKAVESIIENSHIDVKLSPALSRKSIEKHSPAPQSPSTPK 433
PKS P ++DS + +IEN+ D +L SRK E H+ P+ + P+
Sbjct: 287 PKSTSPPKRDSSATQNDARMIENASRD-QLE---SRKDQESHTEKPRKHARPR 335
>SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2484
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 365 SPALSRKSIEKHSPAPQSPSTPKAFFKRKA 454
SPA+SRKS+ +S PQ TPK+ + K+
Sbjct: 2099 SPAMSRKSLNSYSSLPQM-DTPKSNTETKS 2127
>SB_56517| Best HMM Match : CUB (HMM E-Value=0.0011)
Length = 734
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 224 PDSPQTEKDQDCFPAAEPKSNIPLRKDSFVAKAVESIIENSHIDVKLSPALSRKS 388
P SP C P +P+ +P R S + S + +SP +SR S
Sbjct: 466 PPSPLMSPASSCTPDIQPRFKVPSRPGSSAVSLLASCATSQPGSRTVSPLVSRAS 520
>SB_46895| Best HMM Match : rve (HMM E-Value=1.6e-25)
Length = 329
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 89 IKTDERTSKEIKPGV-PEFFNIQLNKVDVVKQSTNVVLTANVTPKKPDSPQTEKDQDCFP 265
I+ +R K + P P + ++ K +++ + +++A PKKP +P +E+ P
Sbjct: 236 IRDQDRMGKVLTPAKSPRSYIVETEKGRQIRRYRSALVSA--APKKPQAPTSEEKPTTPP 293
Query: 266 AAEP 277
A P
Sbjct: 294 AVLP 297
>SB_59366| Best HMM Match : 7tm_1 (HMM E-Value=5.2e-23)
Length = 363
Score = 27.5 bits (58), Expect = 7.1
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -3
Query: 105 LSSVLIAFVMSAFLTGDCSLLMWVTDMN 22
L S+++ +++S DCS + W+ D+N
Sbjct: 240 LPSLILVYIISFCTHCDCSFIHWIRDIN 267
>SB_48596| Best HMM Match : Filament (HMM E-Value=0.23)
Length = 458
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +2
Query: 11 EPETFISVTHINKEQSPVKNADITKAIKTDERTSKEIKPGVPEFFNIQLNKVDVVKQSTN 190
EPE H+N P K++ I + ++ R + IK + + QL + + + ++
Sbjct: 40 EPEEKSCNAHLNTTSKPFKDSTINEELERLRRENDGIKDEL-DMIKSQLGQTQLGRSNSQ 98
Query: 191 VVLT--ANVTPKKPDSPQTEKDQ 253
+ L+ + TP + +SP +DQ
Sbjct: 99 LNLSHLEHSTPPRRESPNM-RDQ 120
>SB_46776| Best HMM Match : Deltaretro_Tax (HMM E-Value=7.4)
Length = 332
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +2
Query: 242 EKDQDCFP---AAEPKSNIPLRKDSFVAKAVESIIENSHIDVKLSPALSRKSIEKHSPAP 412
E Q+ P +PK N PL+K + K S ++ S ++ + H P P
Sbjct: 107 ENSQESLPKIRVTKPK-NAPLKKPAHAQKVYRSYSAGDIFNIDTSVSVKEDKLVPHPPPP 165
Query: 413 QSPSTPKA 436
Q+ P+A
Sbjct: 166 QT-KKPRA 172
>SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07)
Length = 1188
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 392 EKHSPAPQSPSTPKAFFK-RKAGSVELQDXPEKPR 493
E HSP+ +P PK+ K RKA S++ D PE P+
Sbjct: 972 ETHSPS-ATPPMPKSVLKLRKAASLD-ADSPEAPK 1004
>SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1130
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 28 IGHPH*QRTISSQK-CRH--NKSYQDRREDFKRNQAWCARILQHTVKQSGCC*AEY*RCF 198
IGH H T SQK C++ ++ + + R DF +L+H K C + CF
Sbjct: 555 IGHLHKPPTCDSQKSCKYWASRGFCNTRADF---------MLKHCQKSCNTCEQDKLECF 605
Query: 199 DRE 207
DR+
Sbjct: 606 DRD 608
>SB_56455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 27.1 bits (57), Expect = 9.4
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 8 LEPETFISVTHINKEQSPVKNADITKAIKTDERTSKEIK--PGVPEFFNIQLNKVDVVKQ 181
+EP I +N+E + + +ITK + T T K +K G + V+
Sbjct: 118 IEPPKNIISQKLNQETNGGQLREITKVLNTPRDTKKVVKTTAGETKRDTASAENTRAVRS 177
Query: 182 STNVVLTANVTPKKPDSPQTEKDQD 256
+ NVV+ N + D+ + D D
Sbjct: 178 TRNVVI--NFSESDDDNDLDDDDDD 200
>SB_30575| Best HMM Match : Pico_P2A (HMM E-Value=5.9)
Length = 564
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 299 KDSFVAKAVESIIENSHIDVKLSPALSRKSIEKHSPA 409
K + AK + + + H+D ++ LS+K + H P+
Sbjct: 418 KQRYQAKVLSTNLTIEHLDKTIAKKLSKKHVANHKPS 454
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 404 PAPQSPSTPKAFFKRKAGSVELQDXPE 484
P P P P+ +F+R G++ Q+ E
Sbjct: 588 PGPPGPQGPQVYFRRAVGNLNRQETKE 614
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,597,025
Number of Sequences: 59808
Number of extensions: 314150
Number of successful extensions: 1310
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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