Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312G01f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q73MN6 Cluster: Flagellar hook-associated protein 2; n=... 42 0.009
UniRef50_A2FCP8 Cluster: Zinc finger, C2H2 type family protein; ... 35 0.98
UniRef50_A6RNP2 Cluster: Putative uncharacterized protein; n=1; ... 35 0.98
UniRef50_Q83AR5 Cluster: Primosomal protein N'; n=3; Coxiella bu... 34 2.3
UniRef50_A6DDV9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_Q6K2S9 Cluster: Putative uncharacterized protein OSJNBa... 34 2.3
UniRef50_UPI0000D5659A Cluster: PREDICTED: similar to CG31716-PA... 33 3.0
UniRef50_Q7RFG7 Cluster: 1 beta dynein heavy chain; n=15; Plasmo... 33 3.0
UniRef50_Q4HM05 Cluster: Periplasmic protein Cj0111; n=1; Campyl... 33 5.2
UniRef50_O83842 Cluster: Flagellar hook-associated protein 2; n=... 33 5.2
UniRef50_UPI00015B5D72 Cluster: PREDICTED: similar to viral A-ty... 32 6.9
UniRef50_Q21GW8 Cluster: Regulatory protein, LysR; n=8; Proteoba... 32 6.9
UniRef50_A7ADK3 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_A0KGT3 Cluster: Chemotaxis sensory transducer family pr... 32 6.9
UniRef50_Q9HI75 Cluster: Conserved hypothetical membrane protein... 32 6.9
UniRef50_Q24DG1 Cluster: Putative uncharacterized protein; n=2; ... 32 9.2
UniRef50_Q92BQ2 Cluster: Glycyl-tRNA synthetase beta chain; n=13... 32 9.2
>UniRef50_Q73MN6 Cluster: Flagellar hook-associated protein 2; n=1;
Treponema denticola|Rep: Flagellar hook-associated
protein 2 - Treponema denticola
Length = 652
Score = 41.9 bits (94), Expect = 0.009
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 337 TIFANGTSEKTDFKLDAKPTASAVEATLIQYYA-YNKNIYEYNILTIILGELFDELKTFL 161
TI A+ +SEK + KL KP AV+ +I+ A YN+ + NILT E+ +EL
Sbjct: 405 TIHAHESSEKQE-KLTIKPDVDAVKNAIIELVAKYNRVFAQINILTQNKPEIIEELTYLS 463
Query: 160 EEKAEDIQ 137
E + ED Q
Sbjct: 464 ESEVEDAQ 471
>UniRef50_A2FCP8 Cluster: Zinc finger, C2H2 type family protein;
n=1; Trichomonas vaginalis G3|Rep: Zinc finger, C2H2
type family protein - Trichomonas vaginalis G3
Length = 1139
Score = 35.1 bits (77), Expect = 0.98
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Frame = -2
Query: 481 PDKKPKVVTENGVQEIVGLPENPAQVRLIKPPFVIENGVV---FIVDNDIYT---IFANG 320
P+ KPKV TEN +++ P+ +++ IKP + V F + DI I N
Sbjct: 615 PEIKPKV-TENKPKQVESKPKLE-ELKQIKPKIEEKKSNVVTQFDIRPDIKQNEPIKQNV 672
Query: 319 TSEKTDFKLDAKPTASAVEATLI----QYYAYNKNIYEYNILTIILGELFDELKTFLEEK 152
E+T+ D P S +E I Q NKNI + N ++ + +EL + +
Sbjct: 673 VPEETNMTFDDAPHDSLLELEQIFKPKQSPEENKNIEDQNNSLLLQSNVLEELSSGSHSE 732
Query: 151 AEDIQSIA 128
EDI SI+
Sbjct: 733 NEDITSIS 740
>UniRef50_A6RNP2 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1468
Score = 35.1 bits (77), Expect = 0.98
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -2
Query: 259 TLIQYYAYNKNIYEYNILTIILGELFDELKTFLEEKAEDIQSIATRSRSGF 107
+L QYY++++ + I +L + L T+LE+ EDI + R+ + F
Sbjct: 358 SLYQYYSFDETFSSLQVYCAIAEQLANRLWTYLEDMPEDIHAFTQRTSTAF 408
>UniRef50_Q83AR5 Cluster: Primosomal protein N'; n=3; Coxiella
burnetii|Rep: Primosomal protein N' - Coxiella burnetii
Length = 662
Score = 33.9 bits (74), Expect = 2.3
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -2
Query: 268 VEATLIQYYAYNKNIYEYNILTIILG---ELFDELKTFLEEKAEDIQSIATRS 119
+ A+L++ Y + + Y Y I IILG LF + KT + EK E++ A S
Sbjct: 78 IPASLLKLYCWASDYYHYPIGEIILGSLPRLFRQGKTIISEKIEELNQAAPPS 130
>UniRef50_A6DDV9 Cluster: Putative uncharacterized protein; n=1;
Caminibacter mediatlanticus TB-2|Rep: Putative
uncharacterized protein - Caminibacter mediatlanticus
TB-2
Length = 401
Score = 33.9 bits (74), Expect = 2.3
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = -2
Query: 268 VEATLIQYYAYNKNIYEYNILTIILGELFDELKTFLEEKAEDIQSI 131
+E ++ A K + NI +I +L DEL+ F EEK EDIQ I
Sbjct: 175 IEQKAVEEEAQTKEEVDENI--VITNDLVDELEEFKEEKNEDIQEI 218
>UniRef50_Q6K2S9 Cluster: Putative uncharacterized protein
OSJNBa0060K08.4; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0060K08.4 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 33.9 bits (74), Expect = 2.3
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 461 CDRKWGAGNRWPSRKPSSGEANQTTVCHRK 372
C R W + WP PSSGE VC R+
Sbjct: 92 CRRIWRLASYWPDPAPSSGEGGHLPVCQRE 121
>UniRef50_UPI0000D5659A Cluster: PREDICTED: similar to CG31716-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG31716-PA, isoform A - Tribolium castaneum
Length = 1097
Score = 33.5 bits (73), Expect = 3.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 253 IQYYAYNKNIYEYNILTIILGELFDELKTFLEEKAE 146
I YA+ +YN ++I+LG LFDELK FL +
Sbjct: 116 IAKYAFYAGFIDYNSISILLG-LFDELKLFLRSNGQ 150
>UniRef50_Q7RFG7 Cluster: 1 beta dynein heavy chain; n=15; Plasmodium
(Vinckeia)|Rep: 1 beta dynein heavy chain - Plasmodium
yoelii yoelii
Length = 4507
Score = 33.5 bits (73), Expect = 3.0
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -2
Query: 346 DIYTIFANGTSEKTDFKLDA---KPTASAVEATLIQYYAYNKNIYEYNILTIILGELFD 179
DI + GT E DF +D P ++ ++ L YY K IYE IL++I+ LF+
Sbjct: 1018 DISNTYKKGT-ENNDFNIDVTVFNPMSTDIKK-LYGYYNNEKEIYEDGILSLIIKRLFE 1074
>UniRef50_Q4HM05 Cluster: Periplasmic protein Cj0111; n=1;
Campylobacter lari RM2100|Rep: Periplasmic protein
Cj0111 - Campylobacter lari RM2100
Length = 259
Score = 32.7 bits (71), Expect = 5.2
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -2
Query: 298 KLDAKPTASAVEATLIQYYAYNKNIYEYNI--LTIILGELFDELKTFLEEKAEDIQS 134
+L + S E L+Q Y NK++ NI + ELF +++ + EEK +QS
Sbjct: 66 ELQKENLQSLFEENLLQKYTTNKSVNTQNIEQQASVFNELFGKIEDYQEEKTTKVQS 122
>UniRef50_O83842 Cluster: Flagellar hook-associated protein 2; n=1;
Treponema pallidum|Rep: Flagellar hook-associated
protein 2 - Treponema pallidum
Length = 722
Score = 32.7 bits (71), Expect = 5.2
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = -2
Query: 337 TIFANGTSEKTDFKLDAKPTASAVEATLIQYYA-YNKNIYEYNILTIILGELFDELKTFL 161
T+ + +EKT+ L P +A++ +I++ A YN+ + E NI+T + DEL
Sbjct: 476 TLSLHERTEKTE-TLSVTPDVNAMKNAIIEFVAKYNRLMAEINIVTSNKSAIIDELAYLT 534
Query: 160 -EEKAEDIQSIAT 125
EEK ++ + + +
Sbjct: 535 PEEKKKETEQLGS 547
>UniRef50_UPI00015B5D72 Cluster: PREDICTED: similar to viral A-type
inclusion protein, putative; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to viral A-type
inclusion protein, putative - Nasonia vitripennis
Length = 3263
Score = 32.3 bits (70), Expect = 6.9
Identities = 23/109 (21%), Positives = 53/109 (48%)
Frame = -2
Query: 454 ENGVQEIVGLPENPAQVRLIKPPFVIENGVVFIVDNDIYTIFANGTSEKTDFKLDAKPTA 275
E VQ+ E ++V+ ++ + + +DN+++ N + + +L P A
Sbjct: 1573 EAAVQQAQTCGECASKVQALEAKLQERDAEIENLDNELHNSIGNLVQMQENLRLSTIPAA 1632
Query: 274 SAVEATLIQYYAYNKNIYEYNILTIILGELFDELKTFLEEKAEDIQSIA 128
+A++ + +YN+ + +YN+LT E+ + + L E E ++ +A
Sbjct: 1633 P--DASMQE--SYNELMLQYNVLTATNEEMKAKYEATLHENEELLERVA 1677
>UniRef50_Q21GW8 Cluster: Regulatory protein, LysR; n=8;
Proteobacteria|Rep: Regulatory protein, LysR -
Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM
17024)
Length = 313
Score = 32.3 bits (70), Expect = 6.9
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Frame = -2
Query: 508 YSDNVYFYGPDKKPKVVTENGVQEIV---GLPEN-PAQV--RLIKPPFVIENGVVFIV-D 350
Y+D ++ G + + + +N ++E V G+ + P + +L+ P + G+ + D
Sbjct: 68 YADEIFQVGKELENAITKKNNIRERVFRVGISSSVPKSIAYKLLSPALEKDPGIHLVCKD 127
Query: 349 NDIYTIFANGTSEKTDFKLDAKPTASAV 266
N++ +FA+ KTD + KP +S V
Sbjct: 128 NNLEHLFADLALHKTDLVIADKPLSSDV 155
>UniRef50_A7ADK3 Cluster: Putative uncharacterized protein; n=1;
Parabacteroides merdae ATCC 43184|Rep: Putative
uncharacterized protein - Parabacteroides merdae ATCC
43184
Length = 571
Score = 32.3 bits (70), Expect = 6.9
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = -2
Query: 400 LIKPPFVIENGVVFIVDNDIYTIFANGTSEKTDFKLDAKPTASAVEATLIQYYAYNKNIY 221
L+KP E FI+ +D+ +G +K D + T +AV+A L + Y YNKN Y
Sbjct: 164 LMKPRSSAEETRAFII-SDLEKALNSGLPDKWDDANYGRVTLTAVQALLGKVYLYNKN-Y 221
Query: 220 E 218
E
Sbjct: 222 E 222
>UniRef50_A0KGT3 Cluster: Chemotaxis sensory transducer family
protein; n=2; Aeromonas|Rep: Chemotaxis sensory
transducer family protein - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 990
Score = 32.3 bits (70), Expect = 6.9
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 187 LFDELKTFLEEKAEDIQSIATRSRSGFRA*TPHGAIPQIEYKMCKLTILISNGIKLNIS 11
LFDE T L + S S+ A PH A+P ++ ++ L+S +LN++
Sbjct: 273 LFDEYATLLAADPRHLPSFEQLSQLPMLATLPHPALPDLQQRIISQPTLLSEPAELNLT 331
>UniRef50_Q9HI75 Cluster: Conserved hypothetical membrane protein;
n=1; Thermoplasma acidophilum|Rep: Conserved
hypothetical membrane protein - Thermoplasma acidophilum
Length = 299
Score = 32.3 bits (70), Expect = 6.9
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 252 IRVASTAEAVGFASSLKSVFSLVPFANIV*MSLSTIKTTPFSMTNGGLISLT*AGFSGRP 431
+R++ TA +G A++ + V A IV ++T M GGL+SL FSG P
Sbjct: 148 LRISLTALILGLATAATAALYTVTSARIV-KEYGGLRTVASGMMVGGLVSLPLGSFSGVP 206
>UniRef50_Q24DG1 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 3154
Score = 31.9 bits (69), Expect = 9.2
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = -2
Query: 472 KPKVVTENGVQEIVGLPENPAQ--VRLIKPPFVIENGVVFIVDNDIYTIFANGTSEKTDF 299
KP+++ G E+ P+ ++ ++LIK + + + + + + +F +KTD+
Sbjct: 2423 KPQLMVMKGWIEVQN-PKKDSENFLQLIKQQDEKKKVLGYKIGSVFFNVFTESQIKKTDY 2481
Query: 298 KLDAKPTASAVEATLIQYYAYNKNIYE 218
K D KP S + +QY+ K + E
Sbjct: 2482 KFDIKPFNS--DNAAVQYFVITKKMSE 2506
>UniRef50_Q92BQ2 Cluster: Glycyl-tRNA synthetase beta chain; n=13;
Bacillales|Rep: Glycyl-tRNA synthetase beta chain -
Listeria innocua
Length = 688
Score = 31.9 bits (69), Expect = 9.2
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -2
Query: 229 NIYEYNILTIILGELFDELKTFLEEKAEDIQ----SIATRSRSGFRA*TPHGAIPQIE 68
NIY+++++T I+GE F EL+ + EK +Q +IAT R + + G +PQ +
Sbjct: 390 NIYKFDLVTNIVGE-FPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGVLPQTD 446
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,332,412
Number of Sequences: 1657284
Number of extensions: 9739158
Number of successful extensions: 27616
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 26818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27598
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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