Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312F03f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7QT23 Cluster: Chromosome undetermined scaffold_165, w...    37   0.24 
UniRef50_UPI000049A3E4 Cluster: hypothetical protein 62.t00026; ...    33   5.2  
UniRef50_O14683 Cluster: Tumor protein p53-inducible protein 11;...    32   6.9  

>UniRef50_A7QT23 Cluster: Chromosome undetermined scaffold_165,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_165, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 531

 Score = 37.1 bits (82), Expect = 0.24
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +1

Query: 34  NKQWTHLRWFPEMRRGERKAEQQVGVLWGAGRCVCQLLFSLFPHTCTLQRILLPLHNTFY 213
           N +W H     + RRG++  E          RC  QLLF    + CT   +LL   N F+
Sbjct: 379 NFKWKHEH--KQWRRGKQSEENSCSAFISKTRCCKQLLFLALVNCCTSFFLLLIFSNPFH 436

Query: 214 LSLVSSV 234
           +SL +++
Sbjct: 437 MSLFTTL 443


>UniRef50_UPI000049A3E4 Cluster: hypothetical protein 62.t00026;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 62.t00026 - Entamoeba histolytica HM-1:IMSS
          Length = 985

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +3

Query: 183 YLTTLTQHILPVTCLISNI*DIFNT-LLLASDVCMYVCNGIFEHHFDPL 326
           YLT L   IL V  L      + +T  +L  D+C+++CNG+F+   +PL
Sbjct: 599 YLTRLNLPILDVFWLSQYPAVLLSTGEVLVLDMCLFLCNGLFKETMNPL 647


>UniRef50_O14683 Cluster: Tumor protein p53-inducible protein 11;
           n=1; Homo sapiens|Rep: Tumor protein p53-inducible
           protein 11 - Homo sapiens (Human)
          Length = 177

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = -1

Query: 125 PAPHSTPTCCSALRSPRRISGNHRR*VHCLLL 30
           P P   P CC AL  PR  + +HR   HCL L
Sbjct: 127 PLPKELPPCCRALVWPRATTASHRH--HCLPL 156


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,264,802
Number of Sequences: 1657284
Number of extensions: 6041345
Number of successful extensions: 15235
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15228
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)