Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312E12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   3.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   3.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   5.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.7  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 457 FPNNDEFIPYVTAGNLAS 404
           F NND+  P   AGNL S
Sbjct: 346 FDNNDQGPPQDDAGNLIS 363


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 457 FPNNDEFIPYVTAGNLAS 404
           F NND+  P   AGNL S
Sbjct: 347 FDNNDQGPPQDDAGNLIS 364


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 425 NVWNEFVVIGKLVVFKFVVIT 487
           N WN+F       VF F +IT
Sbjct: 62  NKWNQFRSYSNFSVFLFDIIT 82


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 457 FPNNDEFIPYVTAGNLAS 404
           F NND+  P   AGNL S
Sbjct: 347 FDNNDQGPPQDGAGNLIS 364


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 478 DEFEDNQFPNNDEFIP 431
           +E +  + P NDE++P
Sbjct: 369 NELDRREDPTNDEYLP 384


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 8   HSTNENLQIYVGFIFNSYTSQFK 76
           +S  + L++   F+FN+Y S+ K
Sbjct: 250 YSKFQTLELEKEFLFNAYVSKQK 272


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,934
Number of Sequences: 336
Number of extensions: 2192
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)