Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312E11f
         (376 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9HYS5 Cluster: Putative uncharacterized protein; n=5; ...    32   3.9  
UniRef50_UPI000065E8C3 Cluster: UPI000065E8C3 related cluster; n...    31   5.2  
UniRef50_Q2GVL5 Cluster: Putative uncharacterized protein; n=1; ...    31   5.2  
UniRef50_A0HJ42 Cluster: Putative uncharacterized protein; n=1; ...    31   9.1  
UniRef50_Q0DF96 Cluster: Os06g0106500 protein; n=3; Oryza sativa...    31   9.1  

>UniRef50_Q9HYS5 Cluster: Putative uncharacterized protein; n=5;
           Pseudomonas aeruginosa|Rep: Putative uncharacterized
           protein - Pseudomonas aeruginosa
          Length = 151

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 25  TETLLSGTRSGARTKSVCGFRRRVLVGYLCDEFPWLG 135
           T  +L   R GA T   C    ++LV  LCD+F W G
Sbjct: 85  TVAILVAPRLGAATFIACVVAGQMLVSALCDQFGWAG 121


>UniRef50_UPI000065E8C3 Cluster: UPI000065E8C3 related cluster; n=1;
            Takifugu rubripes|Rep: UPI000065E8C3 UniRef100 entry -
            Takifugu rubripes
          Length = 1401

 Score = 31.5 bits (68), Expect = 5.2
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 152  RAPRTSPSQGNSSHKYPTSTRLRKPHTLLVLAPDRVP 42
            R P  S + G+SS+  P+S R R PH L   AP   P
Sbjct: 1089 RPPPCSCAGGSSSYSGPSSHRHRSPHNLTPPAPSHSP 1125


>UniRef50_Q2GVL5 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 973

 Score = 31.5 bits (68), Expect = 5.2
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = -3

Query: 167 EDGKPRAPRTSPSQGNSSHKYPTSTRLRKP---HTLLVL 60
           +   P+ P  +P Q N SH+ PT+T   KP   HTLL L
Sbjct: 826 QQSPPQPPTPAPQQANPSHQPPTTTE-EKPSIYHTLLSL 863


>UniRef50_A0HJ42 Cluster: Putative uncharacterized protein; n=1;
           Comamonas testosteroni KF-1|Rep: Putative
           uncharacterized protein - Comamonas testosteroni KF-1
          Length = 339

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = -3

Query: 218 RPPRXSCAXSAHLXXXHEDGKPRAPRTSPSQGNS----SHKYPTSTRLR 84
           RPPR +CA +A+    H    P  PRT+  Q +S     H++P S RLR
Sbjct: 272 RPPRSACAATAY---AHPSLAPSWPRTTAKQASSEKSPDHQHP-SPRLR 316


>UniRef50_Q0DF96 Cluster: Os06g0106500 protein; n=3; Oryza
           sativa|Rep: Os06g0106500 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 502

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -3

Query: 158 KPRAPRTSPSQGNSSHKYPTSTRLRKP 78
           +PRAPR SP   + S K P S RL  P
Sbjct: 19  EPRAPRLSPPHRSGSAKNPRSVRLSPP 45


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,833,094
Number of Sequences: 1657284
Number of extensions: 5472282
Number of successful extensions: 13168
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13163
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)