Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312E07f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR...    29   1.4  
At5g40070.1 68418.m04861 hypothetical protein contains similarit...    28   4.4  
At3g28300.1 68416.m03535 integrin-related protein 14a identical ...    28   4.4  
At3g28290.1 68416.m03533 integrin-related protein 14a identical ...    28   4.4  
At1g09050.1 68414.m01009 expressed protein                             27   7.7  

>At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1046

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 265 IPGEWLEVEPESCNILTMVWTPNQPTAVRETLNFTN 158
           +PG  L++E E C  L  V++P      R  LNFTN
Sbjct: 804 LPGSLLDLEAEDCESLETVFSPLH--TPRALLNFTN 837


>At5g40070.1 68418.m04861 hypothetical protein contains similarity
           to hypothetical proteins of [Arabidopsis thaliana]
          Length = 157

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 114 W*MSKARQTNQKGLKYHQVK*KESHQKNRQLQFTKKK 4
           W  +K ++   KGLK    K K S +KN+ L+  K+K
Sbjct: 35  WVQNKKKKKKNKGLKNPNKKRKTSLKKNKGLKNPKRK 71


>At3g28300.1 68416.m03535 integrin-related protein 14a identical to
           integrin-related At14a protein GI:11994573 [Arabidopsis
           thaliana]
          Length = 385

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +3

Query: 168 LRVSLTAVGWLGVHTIV 218
           L + L A+GW+GVHTI+
Sbjct: 252 LSLPLIAIGWVGVHTIL 268


>At3g28290.1 68416.m03533 integrin-related protein 14a identical to
           At14a protein GI:11994573 [Arabidopsis thaliana] [Gene
           230 (1), 33-40 (1999)], At14a protein [Arabidopsis
           thaliana] GI:4589123
          Length = 385

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +3

Query: 168 LRVSLTAVGWLGVHTIV 218
           L + L A+GW+GVHTI+
Sbjct: 252 LSLPLIAIGWVGVHTIL 268


>At1g09050.1 68414.m01009 expressed protein
          Length = 916

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 514 YFEIETTPEHVKRARRTACKSEESP 440
           Y+ +++ P ++KR R +AC S ESP
Sbjct: 590 YYAVDSAP-YLKRRRLSACISRESP 613


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,840,535
Number of Sequences: 28952
Number of extensions: 286115
Number of successful extensions: 834
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)