Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312E06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   2.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.7  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.7  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 210 SIKVYNKLKSLTLLNFFLRN 269
           +IK+ N+L+ L L N  LRN
Sbjct: 37  AIKILNRLEELDLSNNRLRN 56


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 5/19 (26%), Positives = 14/19 (73%)
 Frame = +1

Query: 106 FLCSSDILNLFHNILSLTK 162
           ++C++ I  +FH++L + +
Sbjct: 155 YVCNTTIFLIFHSVLPIKR 173


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 321 NKNKTLQWPRLQT 283
           NK+K LQ+P L T
Sbjct: 115 NKSKNLQFPLLST 127


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 127 KCHLNIKSHQYKNIYSKMIL 68
           KC+L    +  K  YSK+I+
Sbjct: 219 KCNLTFSWYSKKVFYSKIII 238


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 321 NKNKTLQWPRLQT 283
           NK+K LQ+P L T
Sbjct: 115 NKSKNLQFPLLST 127


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 321 NKNKTLQWPRLQT 283
           NK+K LQ+P L T
Sbjct: 115 NKSKNLQFPLLST 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,530
Number of Sequences: 336
Number of extensions: 2296
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)