Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312C12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 207 INRDVDVLIALHCATQVSTFICSFIYVTHVYVISI 103
           +NR    +I + C  Q +T + +F Y    Y ISI
Sbjct: 530 VNRIFGFIIIIGCLIQFNTIVFAFCYC--YYSISI 562


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 153 TFICSFIYVTHVYVIS 106
           TF+  ++Y+T +YV S
Sbjct: 7   TFLAIWLYLTAIYVSS 22


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 14/55 (25%), Positives = 23/55 (41%)
 Frame = -1

Query: 248 PNTAQQTANDYQYSLTETWTS*SHFTVQHR*VLLSVLLFMSHTFTLSQSVISKST 84
           P+   +  N+Y +   E         + H+ V  SVL F    +TL  S++   T
Sbjct: 321 PSILHELRNNYFHMDLENNVQSYSLQLLHQKVQFSVLGFFVVDYTLLYSIVGAVT 375


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,372
Number of Sequences: 336
Number of extensions: 2410
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)