Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312C07f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   1.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   8.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +1

Query: 274 CDRAGLSMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQ 396
           C+  G  ++ + +  DG PI+ N+    +E    +   +YQ
Sbjct: 349 CNFEGNPIKTISWLKDGHPIDHNEAVLRIESVRKEDKGMYQ 389


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 29  RHYHAIAQAVIYAFVCENRYQISL 100
           RH+  +A    + F+ EN+YQ+ +
Sbjct: 117 RHHEEVADGHQHHFLHENKYQLEV 140


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory
          receptor candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 33 ITTPSHKLSFTRSFVKTDTKSV 98
          I TPS KLS  RSF+     +V
Sbjct: 31 INTPSFKLSKIRSFLNITASAV 52


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 29  RHYHAIAQAVIYAFVCENRYQISL 100
           RH+  +A    + F+ EN+YQ+ +
Sbjct: 117 RHHEEVADGHQHHFLHENKYQLEV 140


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 29  RHYHAIAQAVIYAFVCENRYQISL 100
           RH+  +A    + F+ EN+YQ+ +
Sbjct: 117 RHHEEVADGHQHHFLHENKYQLEV 140


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 4    PFPPSYDRTPLP 39
            P PP+ ++ PLP
Sbjct: 1377 PIPPTSEKPPLP 1388


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 335 MRMTLQHHLRWK 370
           + MTL HH R+K
Sbjct: 69  LEMTLAHHCRFK 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,396
Number of Sequences: 336
Number of extensions: 2368
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)